RNA–Protein interactions for RNA: ENST00000635450.2

LINC00339-209, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-209ENST00000635450 CAPGP40121 348 aa12.96□□□□□ -0.33
LINC00339-209ENST00000635450 NPY4RP50391 375 aa12.96□□□□□ -0.33
LINC00339-209ENST00000635450 PAX2Q02962 417 aa12.96□□□□□ -0.33
LINC00339-209ENST00000635450 SCGB2A2Q13296 93 aa12.96□□□□□ -0.33
LINC00339-209ENST00000635450 TUSC1Q2TAM9 212 aa12.96□□□□□ -0.33
LINC00339-209ENST00000635450 FAM76BQ5HYJ3 339 aa12.96□□□□□ -0.33
LINC00339-209ENST00000635450 TEX36Q5VZQ5 186 aa12.96□□□□□ -0.33
LINC00339-209ENST00000635450 LYPD2Q6UXB3 125 aa12.96□□□□□ -0.33
LINC00339-209ENST00000635450 Q6ZSR3 168 aa12.96□□□□□ -0.33
LINC00339-209ENST00000635450 USP43Q70EL4 1123 aa12.96□□□□□ -0.33
LINC00339-209ENST00000635450 EGFL6Q8IUX8 553 aa12.96□□□□□ -0.33
LINC00339-209ENST00000635450 SYS1Q8N2H4 156 aa12.96□□□□□ -0.33
LINC00339-209ENST00000635450 PRSS35Q8N3Z0 413 aa12.96□□□□□ -0.33
LINC00339-209ENST00000635450 BPIFB2Q8N4F0 458 aa12.96□□□□□ -0.33
LINC00339-209ENST00000635450 OR2G2Q8NGZ5 317 aa12.96□□□□□ -0.33
LINC00339-209ENST00000635450 ZNF671Q8TAW3 534 aa12.96□□□□□ -0.33
LINC00339-209ENST00000635450 CNIH3Q8TBE1 160 aa12.96□□□□□ -0.33
LINC00339-209ENST00000635450 ZFAND2BQ8WV99 257 aa12.96□□□□□ -0.33
LINC00339-209ENST00000635450 DUX5Q96PT3 197 aa12.96□□□□□ -0.33
LINC00339-209ENST00000635450 GPR173Q9NS66 373 aa12.96□□□□□ -0.33
LINC00339-209ENST00000635450 ERVK13-1Q9NX77 482 aa12.96□□□□□ -0.33
LINC00339-209ENST00000635450 ZNF69Q9UC07 566 aa12.96□□□□□ -0.33
LINC00339-209ENST00000635450 INSIG2Q9Y5U4 225 aa12.96□□□□□ -0.33
LINC00339-209ENST00000635450 HSPE1-MOB4S4R3N1 261 aa12.96□□□□□ -0.33
LINC00339-209ENST00000635450 IGHV3OR15-7A0A075B7D8 119 aa12.95□□□□□ -0.34
LINC00339-209ENST00000635450 IGHV3OR16-10A0A075B7F0 116 aa12.95□□□□□ -0.34
LINC00339-209ENST00000635450 LOC107986453A0A1B0GWG9 222 aa12.95□□□□□ -0.34
LINC00339-209ENST00000635450 A6NIN4 97 aa12.95□□□□□ -0.34
LINC00339-209ENST00000635450 SRRM5B3KS81 715 aa12.95□□□□□ -0.34
LINC00339-209ENST00000635450 SERPINA3P01011 423 aa12.95□□□□□ -0.34
LINC00339-209ENST00000635450 GYPAP02724 150 aa12.95□□□□□ -0.34
LINC00339-209ENST00000635450 KIR3DL2P43630 455 aa12.95□□□□□ -0.34
LINC00339-209ENST00000635450 MRPL28Q13084 256 aaKnown RBP12.95□□□□□ -0.34
LINC00339-209ENST00000635450 SMN1Q16637 294 aaKnown RBP12.95□□□□□ -0.34
LINC00339-209ENST00000635450 DMRTC1Q5HYR2 192 aa12.95□□□□□ -0.34
LINC00339-209ENST00000635450 TMEM42Q69YG0 159 aa12.95□□□□□ -0.34
LINC00339-209ENST00000635450 FDX2Q6P4F2 183 aa12.95□□□□□ -0.34
LINC00339-209ENST00000635450 BTNL3Q6UXE8 466 aa12.95□□□□□ -0.34
LINC00339-209ENST00000635450 C12orf54Q6X4T0 127 aa12.95□□□□□ -0.34
LINC00339-209ENST00000635450 C8orf59Q8N0T1 100 aaPredicted RBP12.95□□□□□ -0.34
LINC00339-209ENST00000635450 SIGLECL1Q8N7X8 197 aa12.95□□□□□ -0.34
LINC00339-209ENST00000635450 DACT3Q96B18 629 aaPredicted RBP12.95□□□□□ -0.34
LINC00339-209ENST00000635450 PELI1Q96FA3 418 aa12.95□□□□□ -0.34
LINC00339-209ENST00000635450 C1orf147Q96MC9 270 aaPredicted RBP12.95□□□□□ -0.34
LINC00339-209ENST00000635450 ZNF48Q96MX3 618 aaPredicted RBP12.95□□□□□ -0.34
LINC00339-209ENST00000635450 TECTBQ96PL2 329 aa12.95□□□□□ -0.34
LINC00339-209ENST00000635450 FGF23Q9GZV9 251 aaPredicted RBP12.95□□□□□ -0.34
LINC00339-209ENST00000635450 DNAJB11Q9UBS4 358 aa12.95□□□□□ -0.34
LINC00339-209ENST00000635450 SLC7A11Q9UPY5 501 aa12.95□□□□□ -0.34
LINC00339-209ENST00000635450 ANKRD61A6NGH8 418 aa12.94□□□□□ -0.34
LINC00339-209ENST00000635450 GATBO75879 557 aaKnown RBP12.94□□□□□ -0.34
LINC00339-209ENST00000635450 IGHV4-38-2P0DP08 117 aa12.94□□□□□ -0.34
LINC00339-209ENST00000635450 GLRA1P23415 457 aa12.94□□□□□ -0.34
LINC00339-209ENST00000635450 DCKP27707 260 aa12.94□□□□□ -0.34
LINC00339-209ENST00000635450 CCR9P51686 369 aa12.94□□□□□ -0.34
LINC00339-209ENST00000635450 GBX2P52951 348 aaPredicted RBP12.94□□□□□ -0.34
LINC00339-209ENST00000635450 GMFBP60983 142 aa12.94□□□□□ -0.34
LINC00339-209ENST00000635450 UBA52P62987 128 aaKnown RBP12.94□□□□□ -0.34
LINC00339-209ENST00000635450 MED21Q13503 144 aa12.94□□□□□ -0.34
LINC00339-209ENST00000635450 ALKBH1Q13686 389 aaKnown RBP12.94□□□□□ -0.34
LINC00339-209ENST00000635450 ARMCX4Q5H9R4 360 aa12.94□□□□□ -0.34
LINC00339-209ENST00000635450 WDR25Q64LD2 544 aaPredicted RBP12.94□□□□□ -0.34
LINC00339-209ENST00000635450 HAGHLQ6PII5 290 aaPredicted RBP12.94□□□□□ -0.34
LINC00339-209ENST00000635450 SLC36A1Q7Z2H8 476 aa12.94□□□□□ -0.34
LINC00339-209ENST00000635450 FAM90A1Q86YD7 464 aa12.94□□□□□ -0.34
LINC00339-209ENST00000635450 ZNF573Q86YE8 665 aa12.94□□□□□ -0.34
LINC00339-209ENST00000635450 HAVCR2Q8TDQ0 301 aa12.94□□□□□ -0.34
LINC00339-209ENST00000635450 FAM216AQ8WUB2 273 aa12.94□□□□□ -0.34
LINC00339-209ENST00000635450 TAF15Q92804 592 aaKnown RBP eCLIP12.94□□□□□ -0.34
LINC00339-209ENST00000635450 C10orf35Q96D05 121 aa12.94□□□□□ -0.34
LINC00339-209ENST00000635450 MRI1Q9BV20 369 aa12.94□□□□□ -0.34
LINC00339-209ENST00000635450 SUCNR1Q9BXA5 334 aa12.94□□□□□ -0.34
LINC00339-209ENST00000635450 OR51I2Q9H344 312 aa12.94□□□□□ -0.34
LINC00339-209ENST00000635450 FGF20Q9NP95 211 aaPredicted RBP12.94□□□□□ -0.34
LINC00339-209ENST00000635450 FRRS1LQ9P0K9 344 aa12.94□□□□□ -0.34
LINC00339-209ENST00000635450 NKX1-2Q9UD57 310 aaPredicted RBP12.94□□□□□ -0.34
LINC00339-209ENST00000635450 AUP1Q9Y679 476 aa12.94□□□□□ -0.34
LINC00339-209ENST00000635450 TMEM89A2RUT3 159 aa12.93□□□□□ -0.34
LINC00339-209ENST00000635450 TRIM77I1YAP6 450 aa12.93□□□□□ -0.34
LINC00339-209ENST00000635450 TMPRSS2O15393 492 aa12.93□□□□□ -0.34
LINC00339-209ENST00000635450 AKR7A2O43488 359 aa12.93□□□□□ -0.34
LINC00339-209ENST00000635450 ISG15P05161 165 aa12.93□□□□□ -0.34
LINC00339-209ENST00000635450 RPSAP08865 295 aaKnown RBP12.93□□□□□ -0.34
LINC00339-209ENST00000635450 MYL12AP19105 171 aa12.93□□□□□ -0.34
LINC00339-209ENST00000635450 HAAOP46952 286 aa12.93□□□□□ -0.34
LINC00339-209ENST00000635450 NANOS3P60323 173 aaKnown RBP12.93□□□□□ -0.34
LINC00339-209ENST00000635450 CD276Q5ZPR3 534 aa12.93□□□□□ -0.34
LINC00339-209ENST00000635450 RDH10Q8IZV5 341 aa12.93□□□□□ -0.34
LINC00339-209ENST00000635450 ZNF676Q8N7Q3 588 aa12.93□□□□□ -0.34
LINC00339-209ENST00000635450 RAB40AQ8WXH6 277 aa12.93□□□□□ -0.34
LINC00339-209ENST00000635450 C12orf43Q96C57 262 aaKnown RBP12.93□□□□□ -0.34
LINC00339-209ENST00000635450 ISG20L2Q9H9L3 353 aaKnown RBP12.93□□□□□ -0.34
LINC00339-209ENST00000635450 CHCHD3Q9NX63 227 aaKnown RBP12.93□□□□□ -0.34
LINC00339-209ENST00000635450 HHLA2Q9UM44 414 aa12.93□□□□□ -0.34
LINC00339-209ENST00000635450 MGAM2Q2M2H8 2515 aa12.92□□□□□ -0.34
LINC00339-209ENST00000635450 DNAJC9-AS1A6NH13 148 aa12.92□□□□□ -0.34
LINC00339-209ENST00000635450 TNFRSF13BO14836 293 aaPredicted RBP12.92□□□□□ -0.34
LINC00339-209ENST00000635450 CCDC159P0C7I6 412 aa12.92□□□□□ -0.34
LINC00339-209ENST00000635450 ZNF20P17024 532 aa12.92□□□□□ -0.34
LINC00339-209ENST00000635450 COMPP49747 757 aaPredicted RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms