RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 CEACAM18A8MTB9 384 aa4.1□□□□□ -1.75
SDCBP-213ENST00000630925 EVPLLA8MZ36 301 aa4.1□□□□□ -1.75
SDCBP-213ENST00000630925 G3V2T6 193 aa4.1□□□□□ -1.75
SDCBP-213ENST00000630925 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.1□□□□□ -1.75
SDCBP-213ENST00000630925 K7ERI5 159 aa4.1□□□□□ -1.75
SDCBP-213ENST00000630925 MFNGO00587 321 aa4.1□□□□□ -1.75
SDCBP-213ENST00000630925 MRPS12O15235 138 aaKnown RBP4.1□□□□□ -1.75
SDCBP-213ENST00000630925 EEDO75530 441 aaKnown RBP4.1□□□□□ -1.75
SDCBP-213ENST00000630925 BANF1O75531 89 aa4.1□□□□□ -1.75
SDCBP-213ENST00000630925 FOXH1O75593 365 aa4.1□□□□□ -1.75
SDCBP-213ENST00000630925 NXPH3O95157 252 aa4.1□□□□□ -1.75
SDCBP-213ENST00000630925 CD37P11049 281 aa4.1□□□□□ -1.75
SDCBP-213ENST00000630925 GABRG2P18507 467 aa4.1□□□□□ -1.75
SDCBP-213ENST00000630925 PRKACGP22612 351 aa4.1□□□□□ -1.75
SDCBP-213ENST00000630925 EIF2B2P49770 351 aaKnown RBP4.1□□□□□ -1.75
SDCBP-213ENST00000630925 TCTAP57738 103 aa4.1□□□□□ -1.75
SDCBP-213ENST00000630925 DYNLL1P63167 89 aaKnown RBP4.1□□□□□ -1.75
SDCBP-213ENST00000630925 SP4Q02446 784 aa4.1□□□□□ -1.75
SDCBP-213ENST00000630925 LTBQ06643 244 aa4.1□□□□□ -1.75
SDCBP-213ENST00000630925 ST3GAL4Q11206 333 aa4.1□□□□□ -1.75
SDCBP-213ENST00000630925 OR5I1Q13606 314 aa4.1□□□□□ -1.75
SDCBP-213ENST00000630925 RBM39Q14498 530 aaKnown RBP4.1□□□□□ -1.75
SDCBP-213ENST00000630925 RSU1Q15404 277 aa4.1□□□□□ -1.75
SDCBP-213ENST00000630925 ZBED5Q49AG3 693 aa4.1□□□□□ -1.75
SDCBP-213ENST00000630925 TIGD2Q4W5G0 525 aa4.1□□□□□ -1.75
SDCBP-213ENST00000630925 TRMT12Q53H54 448 aaKnown RBP4.1□□□□□ -1.75
SDCBP-213ENST00000630925 FAM27D1Q5T7N8 215 aa4.1□□□□□ -1.75
SDCBP-213ENST00000630925 TMEM78Q5T7P6 136 aa4.1□□□□□ -1.75
SDCBP-213ENST00000630925 PIGZQ86VD9 579 aa4.1□□□□□ -1.75
SDCBP-213ENST00000630925 SVOPLQ8N434 492 aa4.1□□□□□ -1.75
SDCBP-213ENST00000630925 TMEM86BQ8N661 226 aa4.1□□□□□ -1.75
SDCBP-213ENST00000630925 WDSUB1Q8N9V3 476 aa4.1□□□□□ -1.75
SDCBP-213ENST00000630925 KLHDC9Q8NEP7 349 aa4.1□□□□□ -1.75
SDCBP-213ENST00000630925 OR5AR1Q8NGP9 310 aa4.1□□□□□ -1.75
SDCBP-213ENST00000630925 OR5J2Q8NH18 312 aa4.1□□□□□ -1.75
SDCBP-213ENST00000630925 ZNF502Q8TBZ5 544 aa4.1□□□□□ -1.75
SDCBP-213ENST00000630925 MS4A4EQ96PG1 132 aa4.1□□□□□ -1.75
SDCBP-213ENST00000630925 GINS3Q9BRX5 216 aa4.1□□□□□ -1.75
SDCBP-213ENST00000630925 CCDC32Q9BV29 185 aa4.1□□□□□ -1.75
SDCBP-213ENST00000630925 TAPBPLQ9BX59 468 aa4.1□□□□□ -1.75
SDCBP-213ENST00000630925 CIPCQ9C0C6 399 aa4.1□□□□□ -1.75
SDCBP-213ENST00000630925 MEGF9Q9H1U4 602 aa4.1□□□□□ -1.75
SDCBP-213ENST00000630925 REEP4Q9H6H4 257 aa4.1□□□□□ -1.75
SDCBP-213ENST00000630925 A4GALTQ9NPC4 353 aa4.1□□□□□ -1.75
SDCBP-213ENST00000630925 SDR39U1Q9NRG7 319 aaPredicted RBP4.1□□□□□ -1.75
SDCBP-213ENST00000630925 SPANXA1Q9NS26 97 aa4.1□□□□□ -1.75
SDCBP-213ENST00000630925 PACSIN3Q9UKS6 424 aa4.1□□□□□ -1.75
SDCBP-213ENST00000630925 SLC7A7Q9UM01 511 aa4.1□□□□□ -1.75
SDCBP-213ENST00000630925 A0A0A6YYD4 124 aa4.1□□□□□ -1.75
SDCBP-213ENST00000630925 KIR2DS5A0A0G2JLQ3 304 aa4.1□□□□□ -1.75
SDCBP-213ENST00000630925 A0A0G2JNG1 304 aa4.1□□□□□ -1.75
SDCBP-213ENST00000630925 USP27XA6NNY8 438 aa4.1□□□□□ -1.75
SDCBP-213ENST00000630925 IDSB3KWA1 339 aa4.1□□□□□ -1.75
SDCBP-213ENST00000630925 K7EMT4 169 aa4.1□□□□□ -1.75
SDCBP-213ENST00000630925 ZNF593O00488 134 aaPredicted RBP4.1□□□□□ -1.75
SDCBP-213ENST00000630925 CHST10O43529 356 aa4.1□□□□□ -1.75
SDCBP-213ENST00000630925 ORC5O43913 435 aa4.1□□□□□ -1.75
SDCBP-213ENST00000630925 KLF8O95600 359 aaPredicted RBP4.1□□□□□ -1.75
SDCBP-213ENST00000630925 RPLP0P05388 317 aaKnown RBP4.1□□□□□ -1.75
SDCBP-213ENST00000630925 COX5AP20674 150 aa4.1□□□□□ -1.75
SDCBP-213ENST00000630925 AK4P27144 223 aaPredicted RBP4.1□□□□□ -1.75
SDCBP-213ENST00000630925 CD96P40200 585 aa4.1□□□□□ -1.75
SDCBP-213ENST00000630925 TFPI2P48307 235 aa4.1□□□□□ -1.75
SDCBP-213ENST00000630925 SSR4P51571 173 aa4.1□□□□□ -1.75
SDCBP-213ENST00000630925 AKR1D1P51857 326 aa4.1□□□□□ -1.75
SDCBP-213ENST00000630925 UBE2E1P51965 193 aa4.1□□□□□ -1.75
SDCBP-213ENST00000630925 KLF3P57682 345 aaPredicted RBP4.1□□□□□ -1.75
SDCBP-213ENST00000630925 BTG1P62324 171 aa4.1□□□□□ -1.75
SDCBP-213ENST00000630925 TBPL1P62380 186 aa4.1□□□□□ -1.75
SDCBP-213ENST00000630925 ZNF616Q08AN1 781 aa4.1□□□□□ -1.75
SDCBP-213ENST00000630925 KIR2DS5Q14953 304 aa4.1□□□□□ -1.75
SDCBP-213ENST00000630925 ZNF630Q2M218 657 aaPredicted RBP4.1□□□□□ -1.75
SDCBP-213ENST00000630925 VAX1Q5SQQ9 334 aa4.1□□□□□ -1.75
SDCBP-213ENST00000630925 HIST2H3PS2Q5TEC6 136 aa4.1□□□□□ -1.75
SDCBP-213ENST00000630925 TMEM215Q68D42 235 aa4.1□□□□□ -1.75
SDCBP-213ENST00000630925 OR52E8Q6IFG1 317 aa4.1□□□□□ -1.75
SDCBP-213ENST00000630925 SFXN4Q6P4A7 337 aa4.1□□□□□ -1.75
SDCBP-213ENST00000630925 TMEM65Q6PI78 240 aa4.1□□□□□ -1.75
SDCBP-213ENST00000630925 WDR82Q6UXN9 313 aa4.1□□□□□ -1.75
SDCBP-213ENST00000630925 PRSS41Q7RTY9 318 aa4.1□□□□□ -1.75
SDCBP-213ENST00000630925 CBLN2Q8IUK8 224 aa4.1□□□□□ -1.75
SDCBP-213ENST00000630925 TBCKQ8TEA7 893 aa4.1□□□□□ -1.75
SDCBP-213ENST00000630925 SKA2Q8WVK7 121 aaPredicted RBP4.1□□□□□ -1.75
SDCBP-213ENST00000630925 STMN2Q93045 179 aa4.1□□□□□ -1.75
SDCBP-213ENST00000630925 UBE2E2Q96LR5 201 aa4.1□□□□□ -1.75
SDCBP-213ENST00000630925 PDCD1LG2Q9BQ51 273 aa4.1□□□□□ -1.75
SDCBP-213ENST00000630925 SSBP4Q9BWG4 385 aaPredicted RBP4.1□□□□□ -1.75
SDCBP-213ENST00000630925 DCSTAMPQ9H295 470 aa4.1□□□□□ -1.75
SDCBP-213ENST00000630925 OR51J1Q9H342 316 aa4.1□□□□□ -1.75
SDCBP-213ENST00000630925 NIT2Q9NQR4 276 aa4.1□□□□□ -1.75
SDCBP-213ENST00000630925 C19orf73Q9NVV2 129 aa4.1□□□□□ -1.75
SDCBP-213ENST00000630925 ARMCX1Q9P291 453 aa4.1□□□□□ -1.75
SDCBP-213ENST00000630925 UTP11Q9Y3A2 253 aaKnown RBP4.1□□□□□ -1.75
SDCBP-213ENST00000630925 PRSS21Q9Y6M0 314 aa4.1□□□□□ -1.75
SDCBP-213ENST00000630925 ALPK3Q96L96 1907 aa4.09□□□□□ -1.75
SDCBP-213ENST00000630925 H0YIZ8 118 aa4.09□□□□□ -1.75
SDCBP-213ENST00000630925 MANBAO00462 879 aa4.09□□□□□ -1.75
SDCBP-213ENST00000630925 FABP7O15540 132 aa4.09□□□□□ -1.75
SDCBP-213ENST00000630925 MBTPS2O43462 519 aa4.09□□□□□ -1.75
SDCBP-213ENST00000630925 NDUFS7O75251 213 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms