RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 LAMTOR1Q6IAA8 161 aa10.17□□□□□ -0.78
LINC00538-201ENST00000626109 UQCC3Q6UW78 93 aa10.17□□□□□ -0.78
LINC00538-201ENST00000626109 FAM220AQ7Z4H9 259 aa10.17□□□□□ -0.78
LINC00538-201ENST00000626109 NPEPL1Q8NDH3 523 aa10.17□□□□□ -0.78
LINC00538-201ENST00000626109 OR6K6Q8NGW6 343 aa10.17□□□□□ -0.78
LINC00538-201ENST00000626109 SMAP2Q8WU79 429 aaPredicted RBP10.17□□□□□ -0.78
LINC00538-201ENST00000626109 S100A16Q96FQ6 103 aaKnown RBP10.17□□□□□ -0.78
LINC00538-201ENST00000626109 OR14A2Q96R54 314 aa10.17□□□□□ -0.78
LINC00538-201ENST00000626109 GPX7Q96SL4 187 aaPredicted RBP10.17□□□□□ -0.78
LINC00538-201ENST00000626109 PRORYQ9H606 182 aa10.17□□□□□ -0.78
LINC00538-201ENST00000626109 B3GNT2Q9NY97 397 aa10.17□□□□□ -0.78
LINC00538-201ENST00000626109 MGAT4AQ9UM21 535 aa10.17□□□□□ -0.78
LINC00538-201ENST00000626109 AK6Q9Y3D8 172 aaKnown RBP10.17□□□□□ -0.78
LINC00538-201ENST00000626109 TSSC4Q9Y5U2 329 aaPredicted RBP10.17□□□□□ -0.78
LINC00538-201ENST00000626109 FREM2Q5SZK8 3169 aa10.17□□□□□ -0.78
LINC00538-201ENST00000626109 A0A1W2PPK0 400 aa10.17□□□□□ -0.78
LINC00538-201ENST00000626109 ELOA3DA6NLF2 546 aaPredicted RBP10.17□□□□□ -0.78
LINC00538-201ENST00000626109 AIPO00170 330 aa10.17□□□□□ -0.78
LINC00538-201ENST00000626109 TIMM8AO60220 97 aaPredicted RBP10.17□□□□□ -0.78
LINC00538-201ENST00000626109 CRYGBP07316 175 aa10.17□□□□□ -0.78
LINC00538-201ENST00000626109 THBS4P35443 961 aa10.17□□□□□ -0.78
LINC00538-201ENST00000626109 PTGFRP43088 359 aa10.17□□□□□ -0.78
LINC00538-201ENST00000626109 SLC25A1P53007 311 aa10.17□□□□□ -0.78
LINC00538-201ENST00000626109 HCCSP53701 268 aa10.17□□□□□ -0.78
LINC00538-201ENST00000626109 RPS11P62280 158 aaKnown RBP eCLIP10.17□□□□□ -0.78
LINC00538-201ENST00000626109 SNRPD2P62316 118 aaKnown RBP10.17□□□□□ -0.78
LINC00538-201ENST00000626109 DGCR2P98153 550 aa10.17□□□□□ -0.78
LINC00538-201ENST00000626109 ARL6IP1Q15041 203 aa10.17□□□□□ -0.78
LINC00538-201ENST00000626109 OR1C1Q15619 314 aa10.17□□□□□ -0.78
LINC00538-201ENST00000626109 GSG1Q2KHT4 349 aa10.17□□□□□ -0.78
LINC00538-201ENST00000626109 ELOA3BQ3SY89 546 aa10.17□□□□□ -0.78
LINC00538-201ENST00000626109 PDSS1Q5T2R2 415 aa10.17□□□□□ -0.78
LINC00538-201ENST00000626109 DCAF12L2Q5VW00 463 aa10.17□□□□□ -0.78
LINC00538-201ENST00000626109 IGFL2Q6UWQ7 119 aa10.17□□□□□ -0.78
LINC00538-201ENST00000626109 SYT9Q86SS6 491 aa10.17□□□□□ -0.78
LINC00538-201ENST00000626109 C1orf87Q8N0U7 546 aa10.17□□□□□ -0.78
LINC00538-201ENST00000626109 TMEM123Q8N131 208 aa10.17□□□□□ -0.78
LINC00538-201ENST00000626109 C9orf62Q8N4C0 152 aa10.17□□□□□ -0.78
LINC00538-201ENST00000626109 ELOA3Q8NG57 546 aa10.17□□□□□ -0.78
LINC00538-201ENST00000626109 OR13C5Q8NGS8 318 aa10.17□□□□□ -0.78
LINC00538-201ENST00000626109 WIPF2Q8TF74 440 aaPredicted RBP10.17□□□□□ -0.78
LINC00538-201ENST00000626109 LHX4Q969G2 390 aa10.17□□□□□ -0.78
LINC00538-201ENST00000626109 GPR137Q96N19 417 aa10.17□□□□□ -0.78
LINC00538-201ENST00000626109 NMNAT3Q96T66 252 aa10.17□□□□□ -0.78
LINC00538-201ENST00000626109 RBM24Q9BX46 236 aaKnown RBP10.17□□□□□ -0.78
LINC00538-201ENST00000626109 TBL1XR1Q9BZK7 514 aa10.17□□□□□ -0.78
LINC00538-201ENST00000626109 PLEKHA1Q9HB21 404 aa10.17□□□□□ -0.78
LINC00538-201ENST00000626109 KLRF1Q9NZS2 232 aa10.17□□□□□ -0.78
LINC00538-201ENST00000626109 RNF150Q9ULK6 438 aa10.17□□□□□ -0.78
LINC00538-201ENST00000626109 CPAMD8Q8IZJ3 1885 aa10.16□□□□□ -0.78
LINC00538-201ENST00000626109 CBY3A6NI87 242 aa10.16□□□□□ -0.78
LINC00538-201ENST00000626109 IFITM5A6NNB3 132 aa10.16□□□□□ -0.78
LINC00538-201ENST00000626109 GABARAPH6UMI1 98 aa10.16□□□□□ -0.78
LINC00538-201ENST00000626109 M0QXV9 152 aa10.16□□□□□ -0.78
LINC00538-201ENST00000626109 SSNA1O43805 119 aa10.16□□□□□ -0.78
LINC00538-201ENST00000626109 ZNF432O94892 652 aa10.16□□□□□ -0.78
LINC00538-201ENST00000626109 P04436 131 aa10.16□□□□□ -0.78
LINC00538-201ENST00000626109 C4BPBP20851 252 aa10.16□□□□□ -0.78
LINC00538-201ENST00000626109 EPHA1P21709 976 aa10.16□□□□□ -0.78
LINC00538-201ENST00000626109 GLRA1P23415 457 aa10.16□□□□□ -0.78
LINC00538-201ENST00000626109 GDNFP39905 211 aa10.16□□□□□ -0.78
LINC00538-201ENST00000626109 AQP2P41181 271 aa10.16□□□□□ -0.78
LINC00538-201ENST00000626109 KLF9Q13886 244 aaPredicted RBP10.16□□□□□ -0.78
LINC00538-201ENST00000626109 PXDC1Q5TGL8 231 aa10.16□□□□□ -0.78
LINC00538-201ENST00000626109 LINGO2Q7L985 606 aa10.16□□□□□ -0.78
LINC00538-201ENST00000626109 SLC16A9Q7RTY1 509 aa10.16□□□□□ -0.78
LINC00538-201ENST00000626109 ZADH2Q8N4Q0 377 aa10.16□□□□□ -0.78
LINC00538-201ENST00000626109 OR4C3Q8NH37 302 aa10.16□□□□□ -0.78
LINC00538-201ENST00000626109 FAM222BQ8WU58 562 aa10.16□□□□□ -0.78
LINC00538-201ENST00000626109 FCAMRQ8WWV6 532 aa10.16□□□□□ -0.78
LINC00538-201ENST00000626109 AKR1E2Q96JD6 320 aa10.16□□□□□ -0.78
LINC00538-201ENST00000626109 C12orf57Q99622 126 aa10.16□□□□□ -0.78
LINC00538-201ENST00000626109 NOX4Q9NPH5 578 aa10.16□□□□□ -0.78
LINC00538-201ENST00000626109 PPP1R3CQ9UQK1 317 aa10.16□□□□□ -0.78
LINC00538-201ENST00000626109 PIGLQ9Y2B2 252 aa10.16□□□□□ -0.78
LINC00538-201ENST00000626109 CHCHD2Q9Y6H1 151 aaPredicted RBP10.16□□□□□ -0.78
LINC00538-201ENST00000626109 V9GY05 133 aa10.16□□□□□ -0.78
LINC00538-201ENST00000626109 SLC25A12O75746 678 aa10.15□□□□□ -0.78
LINC00538-201ENST00000626109 CCL3P10147 92 aa10.15□□□□□ -0.78
LINC00538-201ENST00000626109 COMPP49747 757 aaPredicted RBP10.15□□□□□ -0.78
LINC00538-201ENST00000626109 RPS4XP62701 263 aaKnown RBP10.15□□□□□ -0.78
LINC00538-201ENST00000626109 ERVK-25P63136 954 aa10.15□□□□□ -0.78
LINC00538-201ENST00000626109 FHL3Q13643 280 aa10.15□□□□□ -0.78
LINC00538-201ENST00000626109 ST3GAL2Q16842 350 aa10.15□□□□□ -0.78
LINC00538-201ENST00000626109 EIF2S3LQ2VIR3 472 aaKnown RBP10.15□□□□□ -0.78
LINC00538-201ENST00000626109 EMC4Q5J8M3 183 aa10.15□□□□□ -0.78
LINC00538-201ENST00000626109 SPINK14Q6IE38 97 aa10.15□□□□□ -0.78
LINC00538-201ENST00000626109 CMTM4Q8IZR5 234 aa10.15□□□□□ -0.78
LINC00538-201ENST00000626109 GATSQ8NAP1 163 aa10.15□□□□□ -0.78
LINC00538-201ENST00000626109 OR11H7Q8NGC8 314 aa10.15□□□□□ -0.78
LINC00538-201ENST00000626109 LGALS14Q8TCE9 139 aa10.15□□□□□ -0.78
LINC00538-201ENST00000626109 SIGLEC12Q96PQ1 595 aa10.15□□□□□ -0.78
LINC00538-201ENST00000626109 DDOQ99489 341 aa10.15□□□□□ -0.78
LINC00538-201ENST00000626109 PDCD1LG2Q9BQ51 273 aa10.15□□□□□ -0.78
LINC00538-201ENST00000626109 TTTY10Q9BZA0 68 aa10.15□□□□□ -0.78
LINC00538-201ENST00000626109 SH2D2AQ9NP31 389 aa10.15□□□□□ -0.78
LINC00538-201ENST00000626109 NANSQ9NR45 359 aa10.15□□□□□ -0.78
LINC00538-201ENST00000626109 SCP2D1Q9UJQ7 156 aa10.15□□□□□ -0.78
LINC00538-201ENST00000626109 ZDHHC8Q9ULC8 765 aa10.15□□□□□ -0.78
LINC00538-201ENST00000626109 DOCK10Q96BY6 2186 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms