RNA–Protein interactions for RNA: ENST00000623364.3

CDKL5-204, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 3

Gene CDKL5, Length 483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-204ENST00000623364 DYNLRB2Q8TF09 96 aa4.6□□□□□ -1.67
CDKL5-204ENST00000623364 PYROXD1Q8WU10 500 aa4.6□□□□□ -1.67
CDKL5-204ENST00000623364 LIPHQ8WWY8 451 aa4.6□□□□□ -1.67
CDKL5-204ENST00000623364 ZNF714Q96N38 554 aa4.6□□□□□ -1.67
CDKL5-204ENST00000623364 CCT7Q99832 543 aa4.6□□□□□ -1.67
CDKL5-204ENST00000623364 HSPB9Q9BQS6 159 aa4.6□□□□□ -1.67
CDKL5-204ENST00000623364 YTHDF1Q9BYJ9 559 aaKnown RBP4.6□□□□□ -1.67
CDKL5-204ENST00000623364 NUF2Q9BZD4 464 aa4.6□□□□□ -1.67
CDKL5-204ENST00000623364 ARMC7Q9H6L4 198 aa4.6□□□□□ -1.67
CDKL5-204ENST00000623364 TNFRSF12AQ9NP84 129 aa4.6□□□□□ -1.67
CDKL5-204ENST00000623364 TAS2R5Q9NYW4 299 aa4.6□□□□□ -1.67
CDKL5-204ENST00000623364 ATPIF1Q9UII2 106 aa4.6□□□□□ -1.67
CDKL5-204ENST00000623364 CHMP2BQ9UQN3 213 aa4.6□□□□□ -1.67
CDKL5-204ENST00000623364 STK38LQ9Y2H1 464 aa4.6□□□□□ -1.67
CDKL5-204ENST00000623364 IGKV1D-43A0A0B4J1Z2 117 aa4.59□□□□□ -1.67
CDKL5-204ENST00000623364 MEX3AA1L020 520 aaKnown RBP4.59□□□□□ -1.67
CDKL5-204ENST00000623364 LRRN3E7EW58 273 aa4.59□□□□□ -1.67
CDKL5-204ENST00000623364 G3V318 75 aa4.59□□□□□ -1.67
CDKL5-204ENST00000623364 BUB1B-PAK6H3BSN5 160 aa4.59□□□□□ -1.67
CDKL5-204ENST00000623364 MAGEB3O15480 346 aa4.59□□□□□ -1.67
CDKL5-204ENST00000623364 AKR7A2O43488 359 aa4.59□□□□□ -1.67
CDKL5-204ENST00000623364 SEC22BO75396 215 aa4.59□□□□□ -1.67
CDKL5-204ENST00000623364 GHRHP01286 108 aa4.59□□□□□ -1.67
CDKL5-204ENST00000623364 RPS17P08708 135 aaKnown RBP4.59□□□□□ -1.67
CDKL5-204ENST00000623364 SCTP09683 121 aa4.59□□□□□ -1.67
CDKL5-204ENST00000623364 CHI3L1P36222 383 aaPredicted RBP4.59□□□□□ -1.67
CDKL5-204ENST00000623364 HPCAL1P37235 193 aa4.59□□□□□ -1.67
CDKL5-204ENST00000623364 DAP3P51398 398 aaKnown RBP4.59□□□□□ -1.67
CDKL5-204ENST00000623364 CLNS1AP54105 237 aaKnown RBP4.59□□□□□ -1.67
CDKL5-204ENST00000623364 RPS16P62249 146 aaKnown RBP4.59□□□□□ -1.67
CDKL5-204ENST00000623364 DPY19L1Q2PZI1 675 aa4.59□□□□□ -1.67
CDKL5-204ENST00000623364 LIN52Q52LA3 116 aa4.59□□□□□ -1.67
CDKL5-204ENST00000623364 SLC25A47Q6Q0C1 308 aa4.59□□□□□ -1.67
CDKL5-204ENST00000623364 CMC1Q7Z7K0 106 aa4.59□□□□□ -1.67
CDKL5-204ENST00000623364 SERPINA11Q86U17 422 aa4.59□□□□□ -1.67
CDKL5-204ENST00000623364 PPIL6Q8IXY8 311 aa4.59□□□□□ -1.67
CDKL5-204ENST00000623364 GJC3Q8NFK1 279 aa4.59□□□□□ -1.67
CDKL5-204ENST00000623364 ZNF483Q8TF39 744 aaPredicted RBP4.59□□□□□ -1.67
CDKL5-204ENST00000623364 TOMM40LQ969M1 308 aa4.59□□□□□ -1.67
CDKL5-204ENST00000623364 RPEQ96AT9 228 aa4.59□□□□□ -1.67
CDKL5-204ENST00000623364 TRNT1Q96Q11 434 aaKnown RBP4.59□□□□□ -1.67
CDKL5-204ENST00000623364 FRRS1LQ9P0K9 344 aa4.59□□□□□ -1.67
CDKL5-204ENST00000623364 PEMTQ9UBM1 199 aa4.59□□□□□ -1.67
CDKL5-204ENST00000623364 ZNF222Q9UK12 451 aa4.59□□□□□ -1.67
CDKL5-204ENST00000623364 RPS6KA6Q9UK32 745 aa4.59□□□□□ -1.67
CDKL5-204ENST00000623364 TRAV41A0A0B4J266 112 aa4.58□□□□□ -1.68
CDKL5-204ENST00000623364 RNF103-CHMP3A0A140T963 221 aa4.58□□□□□ -1.68
CDKL5-204ENST00000623364 TMEM120BA0PK00 339 aa4.58□□□□□ -1.68
CDKL5-204ENST00000623364 TOR1AO14656 332 aa4.58□□□□□ -1.68
CDKL5-204ENST00000623364 AIREO43918 545 aa4.58□□□□□ -1.68
CDKL5-204ENST00000623364 SMIM24O75264 130 aa4.58□□□□□ -1.68
CDKL5-204ENST00000623364 HIST1H2ABP04908 130 aa4.58□□□□□ -1.68
CDKL5-204ENST00000623364 TROVE2P10155 538 aaKnown RBP eCLIP4.58□□□□□ -1.68
CDKL5-204ENST00000623364 LAMP1P11279 417 aa4.58□□□□□ -1.68
CDKL5-204ENST00000623364 FUT3P21217 361 aa4.58□□□□□ -1.68
CDKL5-204ENST00000623364 GLRA1P23415 457 aa4.58□□□□□ -1.68
CDKL5-204ENST00000623364 NOS3P29474 1203 aa4.58□□□□□ -1.68
CDKL5-204ENST00000623364 UBE2HP62256 183 aa4.58□□□□□ -1.68
CDKL5-204ENST00000623364 CLCQ05315 142 aa4.58□□□□□ -1.68
CDKL5-204ENST00000623364 AQP6Q13520 282 aa4.58□□□□□ -1.68
CDKL5-204ENST00000623364 RBM39Q14498 530 aaKnown RBP4.58□□□□□ -1.68
CDKL5-204ENST00000623364 DUSP7Q16829 419 aa4.58□□□□□ -1.68
CDKL5-204ENST00000623364 RFX4Q33E94 735 aa4.58□□□□□ -1.68
CDKL5-204ENST00000623364 ALG10BQ5I7T1 473 aa4.58□□□□□ -1.68
CDKL5-204ENST00000623364 ZCCHC23Q6ZST2 131 aa4.58□□□□□ -1.68
CDKL5-204ENST00000623364 HIST3H2AQ7L7L0 130 aa4.58□□□□□ -1.68
CDKL5-204ENST00000623364 CCDC91Q7Z6B0 441 aa4.58□□□□□ -1.68
CDKL5-204ENST00000623364 CREG2Q8IUH2 290 aa4.58□□□□□ -1.68
CDKL5-204ENST00000623364 CENPLQ8N0S6 344 aaPredicted RBP4.58□□□□□ -1.68
CDKL5-204ENST00000623364 LNX2Q8N448 690 aa4.58□□□□□ -1.68
CDKL5-204ENST00000623364 NATD1Q8N6N6 113 aa4.58□□□□□ -1.68
CDKL5-204ENST00000623364 Q8N9W7 124 aa4.58□□□□□ -1.68
CDKL5-204ENST00000623364 CYB561A3Q8NBI2 242 aa4.58□□□□□ -1.68
CDKL5-204ENST00000623364 NECAP1Q8NC96 275 aa4.58□□□□□ -1.68
CDKL5-204ENST00000623364 OR13A1Q8NGR1 328 aa4.58□□□□□ -1.68
CDKL5-204ENST00000623364 ASB10Q8WXI3 467 aa4.58□□□□□ -1.68
CDKL5-204ENST00000623364 HIST1H2ACQ93077 130 aa4.58□□□□□ -1.68
CDKL5-204ENST00000623364 NMD3Q96D46 503 aaKnown RBP4.58□□□□□ -1.68
CDKL5-204ENST00000623364 TMEM19Q96HH6 336 aa4.58□□□□□ -1.68
CDKL5-204ENST00000623364 METTL2AQ96IZ6 378 aaKnown RBP4.58□□□□□ -1.68
CDKL5-204ENST00000623364 FAM210BQ96KR6 192 aa4.58□□□□□ -1.68
CDKL5-204ENST00000623364 RBP7Q96R05 134 aa4.58□□□□□ -1.68
CDKL5-204ENST00000623364 ATG101Q9BSB4 218 aa4.58□□□□□ -1.68
CDKL5-204ENST00000623364 TLNRD1Q9H1K6 362 aa4.58□□□□□ -1.68
CDKL5-204ENST00000623364 ZCCHC4Q9H5U6 513 aa4.58□□□□□ -1.68
CDKL5-204ENST00000623364 FNDC4Q9H6D8 234 aaPredicted RBP4.58□□□□□ -1.68
CDKL5-204ENST00000623364 WDR55Q9H6Y2 383 aaPredicted RBP4.58□□□□□ -1.68
CDKL5-204ENST00000623364 EVA1AQ9H8M9 152 aa4.58□□□□□ -1.68
CDKL5-204ENST00000623364 EMC7Q9NPA0 242 aa4.58□□□□□ -1.68
CDKL5-204ENST00000623364 ZC4H2Q9NQZ6 224 aa4.58□□□□□ -1.68
CDKL5-204ENST00000623364 POLE4Q9NR33 117 aa4.58□□□□□ -1.68
CDKL5-204ENST00000623364 BAIAP2L1Q9UHR4 511 aa4.58□□□□□ -1.68
CDKL5-204ENST00000623364 COPS3Q9UNS2 423 aa4.58□□□□□ -1.68
CDKL5-204ENST00000623364 TIMM22Q9Y584 194 aa4.58□□□□□ -1.68
CDKL5-204ENST00000623364 DSCAML1Q8TD84 2053 aa4.58□□□□□ -1.68
CDKL5-204ENST00000623364 ANKRD30BLA7E2S9 258 aa4.57□□□□□ -1.68
CDKL5-204ENST00000623364 ZNF850A8MQ14 1090 aa4.57□□□□□ -1.68
CDKL5-204ENST00000623364 LY6LH3BQJ8 138 aa4.57□□□□□ -1.68
CDKL5-204ENST00000623364 K7N7A8 449 aa4.57□□□□□ -1.68
CDKL5-204ENST00000623364 PIAS1O75925 651 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms