RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 SSX9Q7RTT3 188 aa7.93□□□□□ -1.14
HDAC9-229ENST00000622668 OR10V1Q8NGI7 309 aa7.93□□□□□ -1.14
HDAC9-229ENST00000622668 POC1BQ8TC44 478 aa7.93□□□□□ -1.14
HDAC9-229ENST00000622668 GNB4Q9HAV0 340 aa7.93□□□□□ -1.14
HDAC9-229ENST00000622668 SLC17A5Q9NRA2 495 aa7.93□□□□□ -1.14
HDAC9-229ENST00000622668 RAB22AQ9UL26 194 aa7.93□□□□□ -1.14
HDAC9-229ENST00000622668 IGHV3OR16-10A0A075B7F0 116 aa7.92□□□□□ -1.14
HDAC9-229ENST00000622668 A0A0G2JNJ9 132 aa7.92□□□□□ -1.14
HDAC9-229ENST00000622668 ASAH2BP0C7U1 165 aa7.92□□□□□ -1.14
HDAC9-229ENST00000622668 ALOX5APP20292 161 aa7.92□□□□□ -1.14
HDAC9-229ENST00000622668 GFRA1P56159 465 aa7.92□□□□□ -1.14
HDAC9-229ENST00000622668 TNK1Q13470 666 aa7.92□□□□□ -1.14
HDAC9-229ENST00000622668 ZMYND11Q15326 602 aa7.92□□□□□ -1.14
HDAC9-229ENST00000622668 ARTNQ5T4W7 220 aa7.92□□□□□ -1.14
HDAC9-229ENST00000622668 NRG4Q8WWG1 115 aa7.92□□□□□ -1.14
HDAC9-229ENST00000622668 SMIM19Q96E16 107 aa7.92□□□□□ -1.14
HDAC9-229ENST00000622668 MMP27Q9H306 513 aa7.92□□□□□ -1.14
HDAC9-229ENST00000622668 Q9UFV3 132 aa7.92□□□□□ -1.14
HDAC9-229ENST00000622668 A0A087WV48 116 aa7.92□□□□□ -1.14
HDAC9-229ENST00000622668 MS4A18H0YCH9 400 aa7.92□□□□□ -1.14
HDAC9-229ENST00000622668 RAF1P04049 648 aa7.92□□□□□ -1.14
HDAC9-229ENST00000622668 CHRM2P08172 466 aa7.92□□□□□ -1.14
HDAC9-229ENST00000622668 BRS3P32247 399 aa7.92□□□□□ -1.14
HDAC9-229ENST00000622668 CEACAM3P40198 252 aa7.92□□□□□ -1.14
HDAC9-229ENST00000622668 KISS1Q15726 138 aa7.92□□□□□ -1.14
HDAC9-229ENST00000622668 MS4A18Q3C1V0 323 aa7.92□□□□□ -1.14
HDAC9-229ENST00000622668 KRBOX4Q5JUW0 171 aa7.92□□□□□ -1.14
HDAC9-229ENST00000622668 BAIAP2L2Q6UXY1 529 aa7.92□□□□□ -1.14
HDAC9-229ENST00000622668 LYG1Q8N1E2 194 aa7.92□□□□□ -1.14
HDAC9-229ENST00000622668 FADS6Q8N9I5 356 aa7.92□□□□□ -1.14
HDAC9-229ENST00000622668 ADPRHL1Q8NDY3 354 aa7.92□□□□□ -1.14
HDAC9-229ENST00000622668 ZNF420Q8TAQ5 688 aaPredicted RBP7.92□□□□□ -1.14
HDAC9-229ENST00000622668 NARS2Q96I59 477 aaKnown RBP7.92□□□□□ -1.14
HDAC9-229ENST00000622668 GABARAPL3Q9BY60 117 aa7.92□□□□□ -1.14
HDAC9-229ENST00000622668 GAL3ST2Q9H3Q3 398 aa7.92□□□□□ -1.14
HDAC9-229ENST00000622668 PTPRDP23468 1912 aa7.92□□□□□ -1.14
HDAC9-229ENST00000622668 TMEM129A0AVI4 362 aa7.92□□□□□ -1.14
HDAC9-229ENST00000622668 DEFB108AA8MXU0 73 aa7.92□□□□□ -1.14
HDAC9-229ENST00000622668 IGHV1-2P23083 117 aa7.92□□□□□ -1.14
HDAC9-229ENST00000622668 CSRP3P50461 194 aa7.92□□□□□ -1.14
HDAC9-229ENST00000622668 HMGA2P52926 109 aa7.92□□□□□ -1.14
HDAC9-229ENST00000622668 IL13RA1P78552 427 aa7.92□□□□□ -1.14
HDAC9-229ENST00000622668 ZP4Q12836 540 aa7.92□□□□□ -1.14
HDAC9-229ENST00000622668 CNIH2Q6PI25 160 aa7.92□□□□□ -1.14
HDAC9-229ENST00000622668 ZBTB8BQ8NAP8 495 aaPredicted RBP7.92□□□□□ -1.14
HDAC9-229ENST00000622668 SLC26A10Q8NG04 563 aa7.92□□□□□ -1.14
HDAC9-229ENST00000622668 CCL13Q99616 98 aa7.92□□□□□ -1.14
HDAC9-229ENST00000622668 SHARPINQ9H0F6 387 aa7.92□□□□□ -1.14
HDAC9-229ENST00000622668 FKBP14Q9NWM8 211 aa7.92□□□□□ -1.14
HDAC9-229ENST00000622668 PPP1R14DQ9NXH3 145 aa7.92□□□□□ -1.14
HDAC9-229ENST00000622668 PRDM4Q9UKN5 801 aa7.92□□□□□ -1.14
HDAC9-229ENST00000622668 UGT2A1Q9Y4X1 527 aa7.92□□□□□ -1.14
HDAC9-229ENST00000622668 PLCE1Q9P212 2302 aa7.92□□□□□ -1.14
HDAC9-229ENST00000622668 PIGBOS1A0A0B4J2F0 54 aa7.92□□□□□ -1.14
HDAC9-229ENST00000622668 IGHV1-69-2A0A0G2JMI3 117 aa7.92□□□□□ -1.14
HDAC9-229ENST00000622668 TMEM30CPA0ZSE6 113 aa7.92□□□□□ -1.14
HDAC9-229ENST00000622668 RNF212BA8MTL3 300 aa7.92□□□□□ -1.14
HDAC9-229ENST00000622668 IFNA4P05014 189 aa7.92□□□□□ -1.14
HDAC9-229ENST00000622668 GLRXP35754 106 aa7.92□□□□□ -1.14
HDAC9-229ENST00000622668 ZCCHC24Q8N2G6 241 aaKnown RBP7.92□□□□□ -1.14
HDAC9-229ENST00000622668 OR5D13Q8NGL4 314 aa7.92□□□□□ -1.14
HDAC9-229ENST00000622668 EDARADDQ8WWZ3 215 aa7.92□□□□□ -1.14
HDAC9-229ENST00000622668 MAFIPQ8WZ33 124 aa7.92□□□□□ -1.14
HDAC9-229ENST00000622668 A8MXE2 369 aa7.91□□□□□ -1.14
HDAC9-229ENST00000622668 MRPS14O60783 128 aaKnown RBP7.91□□□□□ -1.14
HDAC9-229ENST00000622668 PGA4P0DJD7 388 aa7.91□□□□□ -1.14
HDAC9-229ENST00000622668 PGA3P0DJD8 388 aa7.91□□□□□ -1.14
HDAC9-229ENST00000622668 TAS2R46P59540 309 aa7.91□□□□□ -1.14
HDAC9-229ENST00000622668 RPL31P62899 125 aaKnown RBP7.91□□□□□ -1.14
HDAC9-229ENST00000622668 STAC2Q6ZMT1 411 aa7.91□□□□□ -1.14
HDAC9-229ENST00000622668 COQ8AQ8NI60 647 aa7.91□□□□□ -1.14
HDAC9-229ENST00000622668 KLF14Q8TD94 323 aaPredicted RBP7.91□□□□□ -1.14
HDAC9-229ENST00000622668 PRSS27Q9BQR3 290 aa7.91□□□□□ -1.14
HDAC9-229ENST00000622668 ZNF665Q9H7R5 613 aa7.91□□□□□ -1.14
HDAC9-229ENST00000622668 RAB2AP61019 212 aa7.91□□□□□ -1.14
HDAC9-229ENST00000622668 ISL1P61371 349 aa7.91□□□□□ -1.14
HDAC9-229ENST00000622668 CDK5Q00535 292 aa7.91□□□□□ -1.14
HDAC9-229ENST00000622668 SFXN4Q6P4A7 337 aa7.91□□□□□ -1.14
HDAC9-229ENST00000622668 BRICD5Q6PL45 260 aa7.91□□□□□ -1.14
HDAC9-229ENST00000622668 IGFL3Q6UXB1 125 aa7.91□□□□□ -1.14
HDAC9-229ENST00000622668 ZNF826PQ6ZT77 177 aa7.91□□□□□ -1.14
HDAC9-229ENST00000622668 C1orf174Q8IYL3 243 aa7.91□□□□□ -1.14
HDAC9-229ENST00000622668 THAP6Q8TBB0 222 aa7.91□□□□□ -1.14
HDAC9-229ENST00000622668 RAB40AQ8WXH6 277 aa7.91□□□□□ -1.14
HDAC9-229ENST00000622668 PHYHIPQ92561 330 aa7.91□□□□□ -1.14
HDAC9-229ENST00000622668 GALMQ96C23 342 aa7.91□□□□□ -1.14
HDAC9-229ENST00000622668 ISOC1Q96CN7 298 aa7.91□□□□□ -1.14
HDAC9-229ENST00000622668 WFIKKN1Q96NZ8 548 aa7.91□□□□□ -1.14
HDAC9-229ENST00000622668 WFDC6Q9BQY6 131 aa7.91□□□□□ -1.14
HDAC9-229ENST00000622668 RTN4RQ9BZR6 473 aa7.91□□□□□ -1.14
HDAC9-229ENST00000622668 CHST2Q9Y4C5 530 aa7.91□□□□□ -1.14
HDAC9-229ENST00000622668 ADAMTS9Q9P2N4 1935 aa7.91□□□□□ -1.14
HDAC9-229ENST00000622668 KIF26AQ9ULI4 1882 aaPredicted RBP7.91□□□□□ -1.14
HDAC9-229ENST00000622668 TSC2P49815 1807 aa7.91□□□□□ -1.14
HDAC9-229ENST00000622668 SHOXO15266 292 aa7.91□□□□□ -1.14
HDAC9-229ENST00000622668 PNPP00491 289 aa7.91□□□□□ -1.14
HDAC9-229ENST00000622668 GYPAP02724 150 aa7.91□□□□□ -1.14
HDAC9-229ENST00000622668 PSMB1P20618 241 aaKnown RBP7.91□□□□□ -1.14
HDAC9-229ENST00000622668 CEBPGP53567 150 aa7.91□□□□□ -1.14
HDAC9-229ENST00000622668 PRRX1P54821 245 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms