RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 TNFSF13O75888 250 aa7.03□□□□□ -1.28
VPS11-209ENST00000622309 GJB5O95377 273 aa7.03□□□□□ -1.28
VPS11-209ENST00000622309 ZNF41P51814 821 aaPredicted RBP7.03□□□□□ -1.28
VPS11-209ENST00000622309 TBPL1P62380 186 aa7.03□□□□□ -1.28
VPS11-209ENST00000622309 BTN3A2P78410 334 aa7.03□□□□□ -1.28
VPS11-209ENST00000622309 TCEAL5Q5H9L2 206 aa7.03□□□□□ -1.28
VPS11-209ENST00000622309 LCN10Q6JVE6 187 aa7.03□□□□□ -1.28
VPS11-209ENST00000622309 CLEC18BQ6UXF7 455 aa7.03□□□□□ -1.28
VPS11-209ENST00000622309 VASH2Q86V25 355 aa7.03□□□□□ -1.28
VPS11-209ENST00000622309 POC1AQ8NBT0 407 aa7.03□□□□□ -1.28
VPS11-209ENST00000622309 ZNF738Q8NE65 137 aa7.03□□□□□ -1.28
VPS11-209ENST00000622309 STT3BQ8TCJ2 826 aa7.03□□□□□ -1.28
VPS11-209ENST00000622309 TOMM40LQ969M1 308 aa7.03□□□□□ -1.28
VPS11-209ENST00000622309 SLC41A2Q96JW4 573 aa7.03□□□□□ -1.28
VPS11-209ENST00000622309 ZNF552Q9H707 407 aaPredicted RBP7.03□□□□□ -1.28
VPS11-209ENST00000622309 OSGIN2Q9Y236 505 aa7.03□□□□□ -1.28
VPS11-209ENST00000622309 LIPGQ9Y5X9 500 aa7.03□□□□□ -1.28
VPS11-209ENST00000622309 KCNE3Q9Y6H6 103 aa7.03□□□□□ -1.28
VPS11-209ENST00000622309 MYO16Q9Y6X6 1858 aa7.03□□□□□ -1.28
VPS11-209ENST00000622309 C1QTNF3-AMACRE9PGA6 284 aa7.02□□□□□ -1.29
VPS11-209ENST00000622309 SCDO00767 359 aa7.02□□□□□ -1.29
VPS11-209ENST00000622309 CSRP1P21291 193 aaKnown RBP7.02□□□□□ -1.29
VPS11-209ENST00000622309 RND2P52198 227 aa7.02□□□□□ -1.29
VPS11-209ENST00000622309 ENDOGQ14249 297 aaKnown RBP7.02□□□□□ -1.29
VPS11-209ENST00000622309 SHHQ15465 462 aa7.02□□□□□ -1.29
VPS11-209ENST00000622309 IAH1Q2TAA2 248 aaPredicted RBP7.02□□□□□ -1.29
VPS11-209ENST00000622309 GRINAQ7Z429 371 aa7.02□□□□□ -1.29
VPS11-209ENST00000622309 ZNF740Q8NDX6 193 aa7.02□□□□□ -1.29
VPS11-209ENST00000622309 RNF128Q8TEB7 428 aa7.02□□□□□ -1.29
VPS11-209ENST00000622309 CDS1Q92903 461 aa7.02□□□□□ -1.29
VPS11-209ENST00000622309 MCHR2Q969V1 340 aa7.02□□□□□ -1.29
VPS11-209ENST00000622309 GLIPR2Q9H4G4 154 aa7.02□□□□□ -1.29
VPS11-209ENST00000622309 LAMP3Q9UQV4 416 aa7.02□□□□□ -1.29
VPS11-209ENST00000622309 YLPM1P49750 1951 aaKnown RBP7.02□□□□□ -1.29
VPS11-209ENST00000622309 PLXNA4Q9HCM2 1894 aa7.02□□□□□ -1.29
VPS11-209ENST00000622309 PATJQ8NI35 1801 aa7.02□□□□□ -1.29
VPS11-209ENST00000622309 TRBV5-5A0A0J9YX44 114 aa7.02□□□□□ -1.29
VPS11-209ENST00000622309 ZNF708P17019 499 aa7.02□□□□□ -1.29
VPS11-209ENST00000622309 OR1D2P34982 312 aa7.02□□□□□ -1.29
VPS11-209ENST00000622309 CLDN6P56747 220 aa7.02□□□□□ -1.29
VPS11-209ENST00000622309 HERV-K104P63124 156 aa7.02□□□□□ -1.29
VPS11-209ENST00000622309 ALG10BQ5I7T1 473 aa7.02□□□□□ -1.29
VPS11-209ENST00000622309 OR4C11Q6IEV9 310 aa7.02□□□□□ -1.29
VPS11-209ENST00000622309 KLHL24Q6TFL4 600 aa7.02□□□□□ -1.29
VPS11-209ENST00000622309 SYT13Q7L8C5 426 aa7.02□□□□□ -1.29
VPS11-209ENST00000622309 FAM89BQ8N5H3 189 aa7.02□□□□□ -1.29
VPS11-209ENST00000622309 GVQW1Q8N7I0 195 aa7.02□□□□□ -1.29
VPS11-209ENST00000622309 MRGPRFQ96AM1 343 aa7.02□□□□□ -1.29
VPS11-209ENST00000622309 TNFRSF13CQ96RJ3 184 aa7.02□□□□□ -1.29
VPS11-209ENST00000622309 VAMP8Q9BV40 100 aa7.02□□□□□ -1.29
VPS11-209ENST00000622309 ZDHHC6Q9H6R6 413 aa7.02□□□□□ -1.29
VPS11-209ENST00000622309 AURKAIP1Q9NWT8 199 aaPredicted RBP7.02□□□□□ -1.29
VPS11-209ENST00000622309 ARID1AO14497 2285 aa7.02□□□□□ -1.29
VPS11-209ENST00000622309 TRAPPC6AO75865 159 aa7.02□□□□□ -1.29
VPS11-209ENST00000622309 STAG3L2P0CL84 134 aa7.02□□□□□ -1.29
VPS11-209ENST00000622309 HIST1H1CP16403 213 aaKnown RBP7.02□□□□□ -1.29
VPS11-209ENST00000622309 LMO1P25800 156 aa7.02□□□□□ -1.29
VPS11-209ENST00000622309 CCKBRP32239 447 aa7.02□□□□□ -1.29
VPS11-209ENST00000622309 NUMA1Q14980 2115 aa7.02□□□□□ -1.29
VPS11-209ENST00000622309 MMDQ15546 238 aa7.02□□□□□ -1.29
VPS11-209ENST00000622309 SGPP2Q8IWX5 399 aa7.02□□□□□ -1.29
VPS11-209ENST00000622309 KREMEN2Q8NCW0 462 aa7.02□□□□□ -1.29
VPS11-209ENST00000622309 FAM46BQ96A09 425 aa7.02□□□□□ -1.29
VPS11-209ENST00000622309 OR8B4Q96RC9 309 aa7.02□□□□□ -1.29
VPS11-209ENST00000622309 CMKLR1Q99788 373 aa7.02□□□□□ -1.29
VPS11-209ENST00000622309 ULBP3Q9BZM4 244 aa7.02□□□□□ -1.29
VPS11-209ENST00000622309 TMEM242Q9NWH2 141 aa7.02□□□□□ -1.29
VPS11-209ENST00000622309 FRRS1LQ9P0K9 344 aa7.02□□□□□ -1.29
VPS11-209ENST00000622309 APOBEC3BQ9UH17 382 aaKnown RBP7.02□□□□□ -1.29
VPS11-209ENST00000622309 ICAM5Q9UMF0 924 aa7.02□□□□□ -1.29
VPS11-209ENST00000622309 PPIAL4AQ9Y536 164 aa7.02□□□□□ -1.29
VPS11-209ENST00000622309 COL6A3P12111 3177 aa7.01□□□□□ -1.29
VPS11-209ENST00000622309 ZNF716A6NP11 495 aa7.01□□□□□ -1.29
VPS11-209ENST00000622309 PLPP1O14494 284 aa7.01□□□□□ -1.29
VPS11-209ENST00000622309 TBX19O60806 448 aa7.01□□□□□ -1.29
VPS11-209ENST00000622309 CNIH1O95406 144 aa7.01□□□□□ -1.29
VPS11-209ENST00000622309 HSPB1P04792 205 aaKnown RBP7.01□□□□□ -1.29
VPS11-209ENST00000622309 SELPP16109 830 aa7.01□□□□□ -1.29
VPS11-209ENST00000622309 NPPBP16860 134 aa7.01□□□□□ -1.29
VPS11-209ENST00000622309 PI3P19957 117 aa7.01□□□□□ -1.29
VPS11-209ENST00000622309 CCL20P78556 96 aa7.01□□□□□ -1.29
VPS11-209ENST00000622309 HSF1Q00613 529 aa7.01□□□□□ -1.29
VPS11-209ENST00000622309 PNRC1Q12796 327 aaPredicted RBP7.01□□□□□ -1.29
VPS11-209ENST00000622309 GPM6BQ13491 265 aa7.01□□□□□ -1.29
VPS11-209ENST00000622309 ARL14EPQ8N8R7 260 aaPredicted RBP7.01□□□□□ -1.29
VPS11-209ENST00000622309 RCBTB1Q8NDN9 531 aa7.01□□□□□ -1.29
VPS11-209ENST00000622309 AQP3Q92482 292 aa7.01□□□□□ -1.29
VPS11-209ENST00000622309 IL22RA2Q969J5 263 aa7.01□□□□□ -1.29
VPS11-209ENST00000622309 ERGIC1Q969X5 290 aa7.01□□□□□ -1.29
VPS11-209ENST00000622309 SCGB3A2Q96PL1 93 aa7.01□□□□□ -1.29
VPS11-209ENST00000622309 OR7D2Q96RA2 312 aa7.01□□□□□ -1.29
VPS11-209ENST00000622309 SH3BGRL3Q9H299 93 aa7.01□□□□□ -1.29
VPS11-209ENST00000622309 RXFP3Q9NSD7 469 aa7.01□□□□□ -1.29
VPS11-209ENST00000622309 LHX3Q9UBR4 397 aa7.01□□□□□ -1.29
VPS11-209ENST00000622309 VWA8A3KMH1 1905 aa7.01□□□□□ -1.29
VPS11-209ENST00000622309 LOC105371242A0A075B767 164 aa7.01□□□□□ -1.29
VPS11-209ENST00000622309 A0A1B0GTH9 108 aa7.01□□□□□ -1.29
VPS11-209ENST00000622309 NPIPA2E9PIF3 369 aa7.01□□□□□ -1.29
VPS11-209ENST00000622309 TGFAP01135 160 aa7.01□□□□□ -1.29
VPS11-209ENST00000622309 LAMP2P13473 410 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms