RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 RCBTB2O95199 551 aa2.84□□□□□ -1.95
CPNE3-213ENST00000622183 APOA1P02647 267 aa2.84□□□□□ -1.95
CPNE3-213ENST00000622183 IL4P05112 153 aa2.84□□□□□ -1.95
CPNE3-213ENST00000622183 ZNF286BP0CG31 522 aa2.84□□□□□ -1.95
CPNE3-213ENST00000622183 CD9P21926 228 aa2.84□□□□□ -1.95
CPNE3-213ENST00000622183 PRKACBP22694 351 aa2.84□□□□□ -1.95
CPNE3-213ENST00000622183 PAX6P26367 422 aa2.84□□□□□ -1.95
CPNE3-213ENST00000622183 P2RY2P41231 377 aa2.84□□□□□ -1.95
CPNE3-213ENST00000622183 HADHBP55084 474 aaKnown RBP2.84□□□□□ -1.95
CPNE3-213ENST00000622183 DMC1Q14565 340 aa2.84□□□□□ -1.95
CPNE3-213ENST00000622183 MAD2L1BPQ15013 274 aaPredicted RBP2.84□□□□□ -1.95
CPNE3-213ENST00000622183 PRSS8Q16651 343 aa2.84□□□□□ -1.95
CPNE3-213ENST00000622183 C18orf21Q32NC0 220 aaPredicted RBP2.84□□□□□ -1.95
CPNE3-213ENST00000622183 Q3ZCU0 254 aa2.84□□□□□ -1.95
CPNE3-213ENST00000622183 SETD3Q86TU7 594 aaPredicted RBP2.84□□□□□ -1.95
CPNE3-213ENST00000622183 RBM45Q8IUH3 476 aaKnown RBP2.84□□□□□ -1.95
CPNE3-213ENST00000622183 ZNF101Q8IZC7 436 aa2.84□□□□□ -1.95
CPNE3-213ENST00000622183 ZCCHC24Q8N2G6 241 aaKnown RBP2.84□□□□□ -1.95
CPNE3-213ENST00000622183 ZNF709Q8N972 641 aa2.84□□□□□ -1.95
CPNE3-213ENST00000622183 SPANXA2-OT1Q8N9U9 137 aa2.84□□□□□ -1.95
CPNE3-213ENST00000622183 SPERTQ8NA61 448 aa2.84□□□□□ -1.95
CPNE3-213ENST00000622183 MNS1Q8NEH6 495 aa2.84□□□□□ -1.95
CPNE3-213ENST00000622183 OR6K2Q8NGY2 324 aa2.84□□□□□ -1.95
CPNE3-213ENST00000622183 LGALS14Q8TCE9 139 aa2.84□□□□□ -1.95
CPNE3-213ENST00000622183 RHOXF2Q9BQY4 288 aa2.84□□□□□ -1.95
CPNE3-213ENST00000622183 ULBP2Q9BZM5 246 aa2.84□□□□□ -1.95
CPNE3-213ENST00000622183 ZNF302Q9NR11 478 aa2.84□□□□□ -1.95
CPNE3-213ENST00000622183 VAPAQ9P0L0 249 aa2.84□□□□□ -1.95
CPNE3-213ENST00000622183 RAB23Q9ULC3 237 aa2.84□□□□□ -1.95
CPNE3-213ENST00000622183 ZNF835Q9Y2P0 537 aa2.84□□□□□ -1.95
CPNE3-213ENST00000622183 AP3M1Q9Y2T2 418 aa2.84□□□□□ -1.95
CPNE3-213ENST00000622183 SC5DO75845 299 aa2.83□□□□□ -1.96
CPNE3-213ENST00000622183 RPN2P04844 631 aa2.83□□□□□ -1.96
CPNE3-213ENST00000622183 LIPCP11150 499 aa2.83□□□□□ -1.96
CPNE3-213ENST00000622183 CCL2P13500 99 aa2.83□□□□□ -1.96
CPNE3-213ENST00000622183 IL3RAP26951 378 aa2.83□□□□□ -1.96
CPNE3-213ENST00000622183 GPR4P46093 362 aa2.83□□□□□ -1.96
CPNE3-213ENST00000622183 RGS6P49758 472 aa2.83□□□□□ -1.96
CPNE3-213ENST00000622183 CMC4P56277 68 aaPredicted RBP2.83□□□□□ -1.96
CPNE3-213ENST00000622183 PPP1CAP62136 330 aa2.83□□□□□ -1.96
CPNE3-213ENST00000622183 ZNF616Q08AN1 781 aa2.83□□□□□ -1.96
CPNE3-213ENST00000622183 TOMM34Q15785 309 aaPredicted RBP2.83□□□□□ -1.96
CPNE3-213ENST00000622183 TTC32Q5I0X7 151 aa2.83□□□□□ -1.96
CPNE3-213ENST00000622183 KHDRBS2Q5VWX1 349 aaKnown RBP2.83□□□□□ -1.96
CPNE3-213ENST00000622183 OSR2Q8N2R0 312 aa2.83□□□□□ -1.96
CPNE3-213ENST00000622183 ZNF615Q8N8J6 731 aa2.83□□□□□ -1.96
CPNE3-213ENST00000622183 SLC25A29Q8N8R3 303 aa2.83□□□□□ -1.96
CPNE3-213ENST00000622183 NT5CQ8TCD5 201 aa2.83□□□□□ -1.96
CPNE3-213ENST00000622183 RTN4IP1Q8WWV3 396 aaPredicted RBP2.83□□□□□ -1.96
CPNE3-213ENST00000622183 CDKL2Q92772 493 aa2.83□□□□□ -1.96
CPNE3-213ENST00000622183 ZSCAN16Q9H4T2 348 aaPredicted RBP2.83□□□□□ -1.96
CPNE3-213ENST00000622183 WIF1Q9Y5W5 379 aa2.83□□□□□ -1.96
CPNE3-213ENST00000622183 PEG3Q9GZU2 1588 aa2.83□□□□□ -1.96
CPNE3-213ENST00000622183 IGLV3-12A0A075B6K2 115 aa2.82□□□□□ -1.96
CPNE3-213ENST00000622183 RAB19A4D1S5 217 aa2.82□□□□□ -1.96
CPNE3-213ENST00000622183 E2F6O75461 281 aa2.82□□□□□ -1.96
CPNE3-213ENST00000622183 ZMPSTE24O75844 475 aa2.82□□□□□ -1.96
CPNE3-213ENST00000622183 SCO1O75880 301 aa2.82□□□□□ -1.96
CPNE3-213ENST00000622183 PMELP40967 661 aa2.82□□□□□ -1.96
CPNE3-213ENST00000622183 PSMB2P49721 201 aa2.82□□□□□ -1.96
CPNE3-213ENST00000622183 TNNC1P63316 161 aa2.82□□□□□ -1.96
CPNE3-213ENST00000622183 LAMTOR4Q0VGL1 99 aa2.82□□□□□ -1.96
CPNE3-213ENST00000622183 FBXL19-AS1Q494R0 122 aa2.82□□□□□ -1.96
CPNE3-213ENST00000622183 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.82□□□□□ -1.96
CPNE3-213ENST00000622183 FAHD1Q6P587 224 aa2.82□□□□□ -1.96
CPNE3-213ENST00000622183 NEGR1Q7Z3B1 354 aa2.82□□□□□ -1.96
CPNE3-213ENST00000622183 SLC35G3Q8N808 338 aa2.82□□□□□ -1.96
CPNE3-213ENST00000622183 TMEM105Q8N8V8 129 aa2.82□□□□□ -1.96
CPNE3-213ENST00000622183 ST20-AS1Q8NBB2 130 aa2.82□□□□□ -1.96
CPNE3-213ENST00000622183 OR5M1Q8NGP8 315 aa2.82□□□□□ -1.96
CPNE3-213ENST00000622183 TMIGD2Q96BF3 282 aa2.82□□□□□ -1.96
CPNE3-213ENST00000622183 PDCD1LG2Q9BQ51 273 aa2.82□□□□□ -1.96
CPNE3-213ENST00000622183 TMED9Q9BVK6 235 aa2.82□□□□□ -1.96
CPNE3-213ENST00000622183 PRRG3Q9BZD7 231 aa2.82□□□□□ -1.96
CPNE3-213ENST00000622183 WDR55Q9H6Y2 383 aaPredicted RBP2.82□□□□□ -1.96
CPNE3-213ENST00000622183 DDIT4Q9NX09 232 aa2.82□□□□□ -1.96
CPNE3-213ENST00000622183 ZNF229Q9UJW7 825 aa2.82□□□□□ -1.96
CPNE3-213ENST00000622183 NPHP4O75161 1426 aaPredicted RBP2.82□□□□□ -1.96
CPNE3-213ENST00000622183 BTNL10A8MVZ5 291 aa2.81□□□□□ -1.96
CPNE3-213ENST00000622183 NDUFS5O43920 106 aa2.81□□□□□ -1.96
CPNE3-213ENST00000622183 DNASE1L1P49184 302 aa2.81□□□□□ -1.96
CPNE3-213ENST00000622183 TAS2R43P59537 309 aa2.81□□□□□ -1.96
CPNE3-213ENST00000622183 IL5RAQ01344 420 aa2.81□□□□□ -1.96
CPNE3-213ENST00000622183 ADIGQ0VDE8 80 aa2.81□□□□□ -1.96
CPNE3-213ENST00000622183 LUZP6Q538Z0 58 aa2.81□□□□□ -1.96
CPNE3-213ENST00000622183 ACTL10Q5JWF8 245 aa2.81□□□□□ -1.96
CPNE3-213ENST00000622183 SYT6Q5T7P8 510 aaPredicted RBP2.81□□□□□ -1.96
CPNE3-213ENST00000622183 HMGN2P46Q86SG4 172 aa2.81□□□□□ -1.96
CPNE3-213ENST00000622183 RNF10Q8N5U6 811 aaKnown RBP2.81□□□□□ -1.96
CPNE3-213ENST00000622183 OR2M7Q8NG81 312 aa2.81□□□□□ -1.96
CPNE3-213ENST00000622183 OR2Z1Q8NG97 314 aa2.81□□□□□ -1.96
CPNE3-213ENST00000622183 DOK4Q8TEW6 326 aa2.81□□□□□ -1.96
CPNE3-213ENST00000622183 ADTRPQ96IZ2 230 aa2.81□□□□□ -1.96
CPNE3-213ENST00000622183 ZNF649Q9BS31 505 aa2.81□□□□□ -1.96
CPNE3-213ENST00000622183 ZNF717Q9BY31 904 aaPredicted RBP2.81□□□□□ -1.96
CPNE3-213ENST00000622183 PRORYQ9H606 182 aa2.81□□□□□ -1.96
CPNE3-213ENST00000622183 RMND1Q9NWS8 449 aa2.81□□□□□ -1.96
CPNE3-213ENST00000622183 SDHAF2Q9NX18 166 aa2.81□□□□□ -1.96
CPNE3-213ENST00000622183 TAS2R5Q9NYW4 299 aa2.81□□□□□ -1.96
CPNE3-213ENST00000622183 ORC6Q9Y5N6 252 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms