RNA–Protein interactions for RNA: ENST00000621562.1

U1.39-201, humanhuman

BASIC

Gene U1, Length 146 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U1.39-201ENST00000621562 CDC6Q99741 560 aa2.82□□□□□ -1.96
U1.39-201ENST00000621562 ARPC5LQ9BPX5 153 aa2.82□□□□□ -1.96
U1.39-201ENST00000621562 HDHD3Q9BSH5 251 aaPredicted RBP2.82□□□□□ -1.96
U1.39-201ENST00000621562 FGF23Q9GZV9 251 aaPredicted RBP2.82□□□□□ -1.96
U1.39-201ENST00000621562 OR10A2Q9H208 303 aa2.82□□□□□ -1.96
U1.39-201ENST00000621562 ARV1Q9H2C2 271 aa2.82□□□□□ -1.96
U1.39-201ENST00000621562 NELFAQ9H3P2 528 aa2.82□□□□□ -1.96
U1.39-201ENST00000621562 PIGMQ9H3S5 423 aa2.82□□□□□ -1.96
U1.39-201ENST00000621562 C11orf1Q9H5F2 150 aa2.82□□□□□ -1.96
U1.39-201ENST00000621562 METTL7AQ9H8H3 244 aa2.82□□□□□ -1.96
U1.39-201ENST00000621562 SEC61A2Q9H9S3 476 aa2.82□□□□□ -1.96
U1.39-201ENST00000621562 RAB18Q9NP72 206 aa2.82□□□□□ -1.96
U1.39-201ENST00000621562 FSCN3Q9NQT6 498 aa2.82□□□□□ -1.96
U1.39-201ENST00000621562 SDHAF3Q9NRP4 125 aa2.82□□□□□ -1.96
U1.39-201ENST00000621562 CRIM1Q9NZV1 1036 aa2.82□□□□□ -1.96
U1.39-201ENST00000621562 WNT16Q9UBV4 365 aa2.82□□□□□ -1.96
U1.39-201ENST00000621562 C19orf25Q9UFG5 118 aaPredicted RBP2.82□□□□□ -1.96
U1.39-201ENST00000621562 TUBD1Q9UJT1 453 aa2.82□□□□□ -1.96
U1.39-201ENST00000621562 PURGQ9UJV8 347 aaKnown RBP2.82□□□□□ -1.96
U1.39-201ENST00000621562 RARRES3Q9UL19 164 aa2.82□□□□□ -1.96
U1.39-201ENST00000621562 ZDHHC8Q9ULC8 765 aa2.82□□□□□ -1.96
U1.39-201ENST00000621562 LHX6Q9UPM6 363 aa2.82□□□□□ -1.96
U1.39-201ENST00000621562 FARSAQ9Y285 508 aaKnown RBP2.82□□□□□ -1.96
U1.39-201ENST00000621562 MRPS17Q9Y2R5 130 aaKnown RBP2.82□□□□□ -1.96
U1.39-201ENST00000621562 POLR1DQ9Y2S0 133 aa2.82□□□□□ -1.96
U1.39-201ENST00000621562 AMDHD2Q9Y303 409 aa2.82□□□□□ -1.96
U1.39-201ENST00000621562 HS3ST3B1Q9Y662 390 aa2.82□□□□□ -1.96
U1.39-201ENST00000621562 SESN1Q9Y6P5 492 aa2.82□□□□□ -1.96
U1.39-201ENST00000621562 GVINP1Q7Z2Y8 2422 aa2.82□□□□□ -1.96
U1.39-201ENST00000621562 YLPM1P49750 1951 aaKnown RBP2.81□□□□□ -1.96
U1.39-201ENST00000621562 PLXNB1O43157 2135 aa2.81□□□□□ -1.96
U1.39-201ENST00000621562 ARFGEF3Q5TH69 2177 aa2.81□□□□□ -1.96
U1.39-201ENST00000621562 RIF1Q5UIP0 2472 aaKnown RBP2.81□□□□□ -1.96
U1.39-201ENST00000621562 LOC400499M0QZD8 3231 aa2.81□□□□□ -1.96
U1.39-201ENST00000621562 LOC100509620A0A075B734 347 aa2.81□□□□□ -1.96
U1.39-201ENST00000621562 TMEM265A0A087WTH1 108 aa2.81□□□□□ -1.96
U1.39-201ENST00000621562 IGHV3-15A0A0B4J1V0 119 aa2.81□□□□□ -1.96
U1.39-201ENST00000621562 hCG_38984A0A1B0GV85 526 aa2.81□□□□□ -1.96
U1.39-201ENST00000621562 TMEM218A2RU14 115 aa2.81□□□□□ -1.96
U1.39-201ENST00000621562 CRYM-AS1A6NIL9 109 aa2.81□□□□□ -1.96
U1.39-201ENST00000621562 SERPINE3A8MV23 424 aa2.81□□□□□ -1.96
U1.39-201ENST00000621562 FAM25EA8MYX2 175 aa2.81□□□□□ -1.96
U1.39-201ENST00000621562 ZNF587BE7ETH6 402 aa2.81□□□□□ -1.96
U1.39-201ENST00000621562 ATP6V1G2-DDX39BF2Z307 99 aa2.81□□□□□ -1.96
U1.39-201ENST00000621562 F5H0A9 414 aaPredicted RBP2.81□□□□□ -1.96
U1.39-201ENST00000621562 G3V3Y1 287 aa2.81□□□□□ -1.96
U1.39-201ENST00000621562 STMND1H3BQB6 276 aa2.81□□□□□ -1.96
U1.39-201ENST00000621562 M0R135 149 aa2.81□□□□□ -1.96
U1.39-201ENST00000621562 MASP2O00187 686 aa2.81□□□□□ -1.96
U1.39-201ENST00000621562 SDCBPO00560 298 aaPredicted RBP2.81□□□□□ -1.96
U1.39-201ENST00000621562 TP53I11O14683 189 aa2.81□□□□□ -1.96
U1.39-201ENST00000621562 NUPL2O15504 423 aaKnown RBP2.81□□□□□ -1.96
U1.39-201ENST00000621562 DNPH1O43598 174 aa2.81□□□□□ -1.96
U1.39-201ENST00000621562 SS18L1O75177 396 aaPredicted RBP2.81□□□□□ -1.96
U1.39-201ENST00000621562 CRTAPO75718 401 aaPredicted RBP2.81□□□□□ -1.96
U1.39-201ENST00000621562 ATG12O94817 140 aa2.81□□□□□ -1.96
U1.39-201ENST00000621562 VAMP5O95183 116 aa2.81□□□□□ -1.96
U1.39-201ENST00000621562 HTR3BO95264 441 aa2.81□□□□□ -1.96
U1.39-201ENST00000621562 WDPCPO95876 746 aa2.81□□□□□ -1.96
U1.39-201ENST00000621562 APOC3P02656 99 aa2.81□□□□□ -1.96
U1.39-201ENST00000621562 GAPDHP04406 335 aaKnown RBP2.81□□□□□ -1.96
U1.39-201ENST00000621562 CD5P06127 495 aa2.81□□□□□ -1.96
U1.39-201ENST00000621562 CTSDP07339 412 aaPredicted RBP2.81□□□□□ -1.96
U1.39-201ENST00000621562 HCKP08631 526 aa2.81□□□□□ -1.96
U1.39-201ENST00000621562 CST2P09228 141 aa2.81□□□□□ -1.96
U1.39-201ENST00000621562 MMP7P09237 267 aaPredicted RBP2.81□□□□□ -1.96
U1.39-201ENST00000621562 HKR1P10072 659 aa2.81□□□□□ -1.96
U1.39-201ENST00000621562 TPT1P13693 172 aaKnown RBP2.81□□□□□ -1.96
U1.39-201ENST00000621562 RCC1P18754 421 aaPredicted RBP2.81□□□□□ -1.96
U1.39-201ENST00000621562 ATF4P18848 351 aaPredicted RBP2.81□□□□□ -1.96
U1.39-201ENST00000621562 GLRA1P23415 457 aa2.81□□□□□ -1.96
U1.39-201ENST00000621562 VAMP1P23763 118 aa2.81□□□□□ -1.96
U1.39-201ENST00000621562 FKBP2P26885 142 aaKnown RBP2.81□□□□□ -1.96
U1.39-201ENST00000621562 HOXA6P31267 233 aa2.81□□□□□ -1.96
U1.39-201ENST00000621562 LPAR6P43657 344 aa2.81□□□□□ -1.96
U1.39-201ENST00000621562 NPBWR1P48145 328 aa2.81□□□□□ -1.96
U1.39-201ENST00000621562 DHPSP49366 369 aaPredicted RBP2.81□□□□□ -1.96
U1.39-201ENST00000621562 SNU13P55769 128 aaKnown RBP2.81□□□□□ -1.96
U1.39-201ENST00000621562 UCP2P55851 309 aa2.81□□□□□ -1.96
U1.39-201ENST00000621562 DSCR4P56555 118 aaPredicted RBP2.81□□□□□ -1.96
U1.39-201ENST00000621562 CLDN15P56746 228 aa2.81□□□□□ -1.96
U1.39-201ENST00000621562 MLF1P58340 268 aa2.81□□□□□ -1.96
U1.39-201ENST00000621562 TAS2R46P59540 309 aa2.81□□□□□ -1.96
U1.39-201ENST00000621562 CSNK2A1P68400 391 aaPredicted RBP2.81□□□□□ -1.96
U1.39-201ENST00000621562 MC2RQ01718 297 aa2.81□□□□□ -1.96
U1.39-201ENST00000621562 ZFP36L1Q07352 338 aaKnown RBP2.81□□□□□ -1.96
U1.39-201ENST00000621562 SCRN3Q0VDG4 424 aa2.81□□□□□ -1.96
U1.39-201ENST00000621562 Q0VFX4 171 aa2.81□□□□□ -1.96
U1.39-201ENST00000621562 PJVKQ0ZLH3 352 aa2.81□□□□□ -1.96
U1.39-201ENST00000621562 CHAF1BQ13112 559 aa2.81□□□□□ -1.96
U1.39-201ENST00000621562 RAB32Q13637 225 aa2.81□□□□□ -1.96
U1.39-201ENST00000621562 TMEM187Q14656 261 aa2.81□□□□□ -1.96
U1.39-201ENST00000621562 ZNF169Q14929 603 aaPredicted RBP2.81□□□□□ -1.96
U1.39-201ENST00000621562 PPA1Q15181 289 aa2.81□□□□□ -1.96
U1.39-201ENST00000621562 TAF13Q15543 124 aa2.81□□□□□ -1.96
U1.39-201ENST00000621562 SLC9A3R2Q15599 337 aa2.81□□□□□ -1.96
U1.39-201ENST00000621562 OR8B8Q15620 311 aa2.81□□□□□ -1.96
U1.39-201ENST00000621562 SGCAQ16586 387 aa2.81□□□□□ -1.96
U1.39-201ENST00000621562 GFOD2Q3B7J2 385 aa2.81□□□□□ -1.96
U1.39-201ENST00000621562 PDSS1Q5T2R2 415 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms