RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 PNPP00491 289 aa7.29□□□□□ -1.24
GPC6-202ENST00000617456 LALBAP00709 142 aa7.29□□□□□ -1.24
GPC6-202ENST00000617456 AVPP01185 164 aa7.29□□□□□ -1.24
GPC6-202ENST00000617456 IGHG1P01857 330 aa7.29□□□□□ -1.24
GPC6-202ENST00000617456 TFP02787 698 aa7.29□□□□□ -1.24
GPC6-202ENST00000617456 HPXP02790 462 aa7.29□□□□□ -1.24
GPC6-202ENST00000617456 THY1P04216 161 aa7.29□□□□□ -1.24
GPC6-202ENST00000617456 ALPLP05186 524 aa7.29□□□□□ -1.24
GPC6-202ENST00000617456 NBEAP1P0C6P0 100 aa7.29□□□□□ -1.24
GPC6-202ENST00000617456 PGA4P0DJD7 388 aa7.29□□□□□ -1.24
GPC6-202ENST00000617456 PGA3P0DJD8 388 aa7.29□□□□□ -1.24
GPC6-202ENST00000617456 HIST1H1BP16401 226 aaKnown RBP7.29□□□□□ -1.24
GPC6-202ENST00000617456 OTX1P32242 354 aaPredicted RBP7.29□□□□□ -1.24
GPC6-202ENST00000617456 MAGEA2P43356 314 aa7.29□□□□□ -1.24
GPC6-202ENST00000617456 CDC34P49427 236 aaPredicted RBP7.29□□□□□ -1.24
GPC6-202ENST00000617456 CRYBA2P53672 197 aa7.29□□□□□ -1.24
GPC6-202ENST00000617456 BIDP55957 195 aa7.29□□□□□ -1.24
GPC6-202ENST00000617456 TMEM33P57088 247 aa7.29□□□□□ -1.24
GPC6-202ENST00000617456 AP3S2P59780 193 aa7.29□□□□□ -1.24
GPC6-202ENST00000617456 GABARAPL2P60520 117 aa7.29□□□□□ -1.24
GPC6-202ENST00000617456 SELENOWP63302 87 aa7.29□□□□□ -1.24
GPC6-202ENST00000617456 ST3GAL3Q11203 375 aa7.29□□□□□ -1.24
GPC6-202ENST00000617456 MAB21L1Q13394 359 aa7.29□□□□□ -1.24
GPC6-202ENST00000617456 SLC36A2Q495M3 483 aa7.29□□□□□ -1.24
GPC6-202ENST00000617456 MIDNQ504T8 468 aa7.29□□□□□ -1.24
GPC6-202ENST00000617456 TM4SF20Q53R12 229 aa7.29□□□□□ -1.24
GPC6-202ENST00000617456 PHYHD1Q5SRE7 291 aa7.29□□□□□ -1.24
GPC6-202ENST00000617456 C10orf128Q5T292 105 aa7.29□□□□□ -1.24
GPC6-202ENST00000617456 AVPI1Q5T686 147 aa7.29□□□□□ -1.24
GPC6-202ENST00000617456 DHRS7BQ6IAN0 325 aaPredicted RBP7.29□□□□□ -1.24
GPC6-202ENST00000617456 RGS7BPQ6MZT1 257 aaPredicted RBP7.29□□□□□ -1.24
GPC6-202ENST00000617456 BPIFB2Q8N4F0 458 aa7.29□□□□□ -1.24
GPC6-202ENST00000617456 CCDC54Q8NEL0 328 aa7.29□□□□□ -1.24
GPC6-202ENST00000617456 OR1J2Q8NGS2 313 aa7.29□□□□□ -1.24
GPC6-202ENST00000617456 MITD1Q8WV92 249 aa7.29□□□□□ -1.24
GPC6-202ENST00000617456 RDH5Q92781 318 aa7.29□□□□□ -1.24
GPC6-202ENST00000617456 MISP3Q96FF7 219 aa7.29□□□□□ -1.24
GPC6-202ENST00000617456 ZNF48Q96MX3 618 aaPredicted RBP7.29□□□□□ -1.24
GPC6-202ENST00000617456 ZNF583Q96ND8 569 aa7.29□□□□□ -1.24
GPC6-202ENST00000617456 HOPXQ9BPY8 73 aaPredicted RBP7.29□□□□□ -1.24
GPC6-202ENST00000617456 SYT3Q9BQG1 590 aa7.29□□□□□ -1.24
GPC6-202ENST00000617456 PRSS27Q9BQR3 290 aa7.29□□□□□ -1.24
GPC6-202ENST00000617456 MRI1Q9BV20 369 aa7.29□□□□□ -1.24
GPC6-202ENST00000617456 EMC6Q9BV81 110 aa7.29□□□□□ -1.24
GPC6-202ENST00000617456 ZNF747Q9BV97 191 aa7.29□□□□□ -1.24
GPC6-202ENST00000617456 SLIRPQ9GZT3 109 aaKnown RBP7.29□□□□□ -1.24
GPC6-202ENST00000617456 DCSTAMPQ9H295 470 aa7.29□□□□□ -1.24
GPC6-202ENST00000617456 NMNAT1Q9HAN9 279 aaPredicted RBP7.29□□□□□ -1.24
GPC6-202ENST00000617456 ESM1Q9NQ30 184 aa7.29□□□□□ -1.24
GPC6-202ENST00000617456 MEPEQ9NQ76 525 aaPredicted RBP7.29□□□□□ -1.24
GPC6-202ENST00000617456 TMEM38BQ9NVV0 291 aa7.29□□□□□ -1.24
GPC6-202ENST00000617456 MED29Q9NX70 200 aa7.29□□□□□ -1.24
GPC6-202ENST00000617456 PLEK2Q9NYT0 353 aa7.29□□□□□ -1.24
GPC6-202ENST00000617456 SLC7A7Q9UM01 511 aa7.29□□□□□ -1.24
GPC6-202ENST00000617456 A0A0A6YYH2 397 aa7.28□□□□□ -1.24
GPC6-202ENST00000617456 ZNF503-AS2A6NEH8 195 aa7.28□□□□□ -1.24
GPC6-202ENST00000617456 CBY3A6NI87 242 aa7.28□□□□□ -1.24
GPC6-202ENST00000617456 A6NJ64 397 aa7.28□□□□□ -1.24
GPC6-202ENST00000617456 CPSF4LA6NMK7 179 aaKnown RBP7.28□□□□□ -1.24
GPC6-202ENST00000617456 FAM220BPB1ANY3 271 aa7.28□□□□□ -1.24
GPC6-202ENST00000617456 J3QW42 95 aa7.28□□□□□ -1.24
GPC6-202ENST00000617456 M0R233 179 aa7.28□□□□□ -1.24
GPC6-202ENST00000617456 HLA-HP01893 362 aa7.28□□□□□ -1.24
GPC6-202ENST00000617456 CD79AP11912 226 aa7.28□□□□□ -1.24
GPC6-202ENST00000617456 ADRA2CP18825 462 aa7.28□□□□□ -1.24
GPC6-202ENST00000617456 FUT1P19526 365 aa7.28□□□□□ -1.24
GPC6-202ENST00000617456 TUBG1P23258 451 aa7.28□□□□□ -1.24
GPC6-202ENST00000617456 GABRR1P24046 479 aa7.28□□□□□ -1.24
GPC6-202ENST00000617456 DDTP30046 118 aa7.28□□□□□ -1.24
GPC6-202ENST00000617456 KDELR2P33947 212 aa7.28□□□□□ -1.24
GPC6-202ENST00000617456 TGM4P49221 684 aa7.28□□□□□ -1.24
GPC6-202ENST00000617456 ZNF84P51523 738 aa7.28□□□□□ -1.24
GPC6-202ENST00000617456 LUMP51884 338 aaPredicted RBP7.28□□□□□ -1.24
GPC6-202ENST00000617456 TAS2R41P59536 307 aa7.28□□□□□ -1.24
GPC6-202ENST00000617456 RAB2AP61019 212 aa7.28□□□□□ -1.24
GPC6-202ENST00000617456 RAB5BP61020 215 aa7.28□□□□□ -1.24
GPC6-202ENST00000617456 MRPS34P82930 218 aaKnown RBP7.28□□□□□ -1.24
GPC6-202ENST00000617456 KLF10Q13118 480 aa7.28□□□□□ -1.24
GPC6-202ENST00000617456 MAD2L1BPQ15013 274 aaPredicted RBP7.28□□□□□ -1.24
GPC6-202ENST00000617456 MSMPQ1L6U9 139 aa7.28□□□□□ -1.24
GPC6-202ENST00000617456 ALKBH6Q3KRA9 238 aa7.28□□□□□ -1.24
GPC6-202ENST00000617456 C9orf152Q5JTZ5 239 aa7.28□□□□□ -1.24
GPC6-202ENST00000617456 RBM48Q5RL73 367 aaKnown RBP7.28□□□□□ -1.24
GPC6-202ENST00000617456 XAF1Q6GPH4 301 aa7.28□□□□□ -1.24
GPC6-202ENST00000617456 SHISA2Q6UWI4 295 aa7.28□□□□□ -1.24
GPC6-202ENST00000617456 WDR88Q6ZMY6 472 aa7.28□□□□□ -1.24
GPC6-202ENST00000617456 ZBTB46Q86UZ6 589 aa7.28□□□□□ -1.24
GPC6-202ENST00000617456 RBM45Q8IUH3 476 aaKnown RBP7.28□□□□□ -1.24
GPC6-202ENST00000617456 ZDHHC22Q8N966 263 aa7.28□□□□□ -1.24
GPC6-202ENST00000617456 BVESQ8NE79 360 aa7.28□□□□□ -1.24
GPC6-202ENST00000617456 OR4D11Q8NGI4 311 aa7.28□□□□□ -1.24
GPC6-202ENST00000617456 OR5D18Q8NGL1 313 aa7.28□□□□□ -1.24
GPC6-202ENST00000617456 NEK7Q8TDX7 302 aa7.28□□□□□ -1.24
GPC6-202ENST00000617456 TMEM239Q8WW34 195 aa7.28□□□□□ -1.24
GPC6-202ENST00000617456 MUL1Q969V5 352 aa7.28□□□□□ -1.24
GPC6-202ENST00000617456 MEGF10Q96KG7 1140 aa7.28□□□□□ -1.24
GPC6-202ENST00000617456 ZNF436Q9C0F3 470 aaPredicted RBP7.28□□□□□ -1.24
GPC6-202ENST00000617456 POLE4Q9NR33 117 aa7.28□□□□□ -1.24
GPC6-202ENST00000617456 SIRT7Q9NRC8 400 aa7.28□□□□□ -1.24
GPC6-202ENST00000617456 TUBG2Q9NRH3 451 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms