RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 CYB5BO43169 146 aa11.64□□□□□ -0.55
MSH6-214ENST00000616033 SCAF4O95104 1147 aaKnown RBP11.64□□□□□ -0.55
MSH6-214ENST00000616033 TTRP02766 147 aa11.64□□□□□ -0.55
MSH6-214ENST00000616033 APLNRP35414 380 aa11.64□□□□□ -0.55
MSH6-214ENST00000616033 TMEM50BP56557 158 aa11.64□□□□□ -0.55
MSH6-214ENST00000616033 SPEM2Q0P670 501 aa11.64□□□□□ -0.55
MSH6-214ENST00000616033 PLCXD2Q0VAA5 305 aa11.64□□□□□ -0.55
MSH6-214ENST00000616033 ISXQ2M1V0 245 aa11.64□□□□□ -0.55
MSH6-214ENST00000616033 C1orf189Q5VU69 101 aa11.64□□□□□ -0.55
MSH6-214ENST00000616033 FAM57BQ71RH2 274 aa11.64□□□□□ -0.55
MSH6-214ENST00000616033 DYRK2Q92630 601 aa11.64□□□□□ -0.55
MSH6-214ENST00000616033 MR1Q95460 341 aa11.64□□□□□ -0.55
MSH6-214ENST00000616033 PIGTQ969N2 578 aa11.64□□□□□ -0.55
MSH6-214ENST00000616033 ELSPBP1Q96BH3 223 aa11.64□□□□□ -0.55
MSH6-214ENST00000616033 GPHA2Q96T91 129 aa11.64□□□□□ -0.55
MSH6-214ENST00000616033 RAB18Q9NP72 206 aa11.64□□□□□ -0.55
MSH6-214ENST00000616033 TMEM127O75204 238 aa11.64□□□□□ -0.55
MSH6-214ENST00000616033 HTR5AP47898 357 aa11.64□□□□□ -0.55
MSH6-214ENST00000616033 RELQ04864 619 aaPredicted RBP11.64□□□□□ -0.55
MSH6-214ENST00000616033 C6orf201Q7Z4U5 140 aa11.64□□□□□ -0.55
MSH6-214ENST00000616033 C1QL2Q7Z5L3 287 aa11.64□□□□□ -0.55
MSH6-214ENST00000616033 SULF2Q8IWU5 870 aa11.64□□□□□ -0.55
MSH6-214ENST00000616033 TMEM217Q8N7C4 229 aa11.64□□□□□ -0.55
MSH6-214ENST00000616033 OR5L1Q8NGL2 311 aa11.64□□□□□ -0.55
MSH6-214ENST00000616033 WFIKKN1Q96NZ8 548 aa11.64□□□□□ -0.55
MSH6-214ENST00000616033 PRRX2Q99811 253 aa11.64□□□□□ -0.55
MSH6-214ENST00000616033 GPR84Q9NQS5 396 aa11.64□□□□□ -0.55
MSH6-214ENST00000616033 H0YL77 283 aa11.63□□□□□ -0.55
MSH6-214ENST00000616033 FOXS1O43638 330 aa11.63□□□□□ -0.55
MSH6-214ENST00000616033 PTGER4P35408 488 aa11.63□□□□□ -0.55
MSH6-214ENST00000616033 BIDP55957 195 aa11.63□□□□□ -0.55
MSH6-214ENST00000616033 FAM189A2Q15884 450 aa11.63□□□□□ -0.55
MSH6-214ENST00000616033 EMC4Q5J8M3 183 aa11.63□□□□□ -0.55
MSH6-214ENST00000616033 DMRTA1Q5VZB9 504 aa11.63□□□□□ -0.55
MSH6-214ENST00000616033 OGFOD3Q6PK18 319 aa11.63□□□□□ -0.55
MSH6-214ENST00000616033 THRSPQ92748 146 aa11.63□□□□□ -0.55
MSH6-214ENST00000616033 AQP10Q96PS8 301 aa11.63□□□□□ -0.55
MSH6-214ENST00000616033 NKX2-4Q9H2Z4 354 aa11.63□□□□□ -0.55
MSH6-214ENST00000616033 TXNIPQ9H3M7 391 aa11.63□□□□□ -0.55
MSH6-214ENST00000616033 MYOZ1Q9NP98 299 aaPredicted RBP11.63□□□□□ -0.55
MSH6-214ENST00000616033 TIMM10BQ9Y5J6 103 aa11.63□□□□□ -0.55
MSH6-214ENST00000616033 IGKV1D-8A0A087WSZ0 117 aa11.63□□□□□ -0.55
MSH6-214ENST00000616033 A0A1B0GWJ7 208 aa11.63□□□□□ -0.55
MSH6-214ENST00000616033 ZNF850A8MQ14 1090 aa11.63□□□□□ -0.55
MSH6-214ENST00000616033 BGLAPP02818 100 aa11.63□□□□□ -0.55
MSH6-214ENST00000616033 HIST1H1DP16402 221 aaKnown RBP11.63□□□□□ -0.55
MSH6-214ENST00000616033 HLA-GP17693 338 aa11.63□□□□□ -0.55
MSH6-214ENST00000616033 COL9A1P20849 921 aa11.63□□□□□ -0.55
MSH6-214ENST00000616033 UBE2KP61086 200 aa11.63□□□□□ -0.55
MSH6-214ENST00000616033 SRSF4Q08170 494 aaKnown RBP11.63□□□□□ -0.55
MSH6-214ENST00000616033 GGNBP1Q5YKI7 109 aa11.63□□□□□ -0.55
MSH6-214ENST00000616033 ZNF440Q8IYI8 595 aa11.63□□□□□ -0.55
MSH6-214ENST00000616033 ZNF283Q8N7M2 679 aa11.63□□□□□ -0.55
MSH6-214ENST00000616033 MAGT1Q9H0U3 335 aa11.63□□□□□ -0.55
MSH6-214ENST00000616033 DUSP15Q9H1R2 295 aaPredicted RBP11.63□□□□□ -0.55
MSH6-214ENST00000616033 NUP210LQ5VU65 1888 aa11.63□□□□□ -0.55
MSH6-214ENST00000616033 NUDT19A8MXV4 375 aa11.63□□□□□ -0.55
MSH6-214ENST00000616033 F5H5K5 113 aa11.63□□□□□ -0.55
MSH6-214ENST00000616033 KLF8O95600 359 aaPredicted RBP11.63□□□□□ -0.55
MSH6-214ENST00000616033 SLC37A1P57057 533 aa11.63□□□□□ -0.55
MSH6-214ENST00000616033 LSM6P62312 80 aaKnown RBP11.63□□□□□ -0.55
MSH6-214ENST00000616033 TLE3Q04726 772 aa11.63□□□□□ -0.55
MSH6-214ENST00000616033 KIAA2026Q5HYC2 2103 aa11.63□□□□□ -0.55
MSH6-214ENST00000616033 TMEM196Q5HYL7 178 aa11.63□□□□□ -0.55
MSH6-214ENST00000616033 NUP54Q7Z3B4 507 aa11.63□□□□□ -0.55
MSH6-214ENST00000616033 OR13H1Q8NG92 308 aa11.63□□□□□ -0.55
MSH6-214ENST00000616033 C11orf40Q8WZ69 217 aa11.63□□□□□ -0.55
MSH6-214ENST00000616033 DAZLQ92904 295 aaKnown RBP11.63□□□□□ -0.55
MSH6-214ENST00000616033 S1PR5Q9H228 398 aa11.63□□□□□ -0.55
MSH6-214ENST00000616033 C19orf12Q9NSK7 152 aa11.63□□□□□ -0.55
MSH6-214ENST00000616033 LUZP4Q9P127 313 aa11.63□□□□□ -0.55
MSH6-214ENST00000616033 PRODH2Q9UF12 536 aa11.63□□□□□ -0.55
MSH6-214ENST00000616033 B3GALT5Q9Y2C3 310 aa11.63□□□□□ -0.55
MSH6-214ENST00000616033 A0A087WZY1 265 aa11.62□□□□□ -0.55
MSH6-214ENST00000616033 TGIF2-C20orf24A0A0A6YYL0 155 aa11.62□□□□□ -0.55
MSH6-214ENST00000616033 EPOPA6NHQ4 379 aa11.62□□□□□ -0.55
MSH6-214ENST00000616033 JTBO76095 146 aa11.62□□□□□ -0.55
MSH6-214ENST00000616033 NPSP0C0P6 89 aa11.62□□□□□ -0.55
MSH6-214ENST00000616033 TMEM225BP0DP42 221 aa11.62□□□□□ -0.55
MSH6-214ENST00000616033 SNCAP37840 140 aa11.62□□□□□ -0.55
MSH6-214ENST00000616033 GABRA4P48169 554 aa11.62□□□□□ -0.55
MSH6-214ENST00000616033 CCL20P78556 96 aa11.62□□□□□ -0.55
MSH6-214ENST00000616033 NSUN5P2Q63ZY6 315 aa11.62□□□□□ -0.55
MSH6-214ENST00000616033 NKAIN3Q8N8D7 197 aa11.62□□□□□ -0.55
MSH6-214ENST00000616033 POC1AQ8NBT0 407 aa11.62□□□□□ -0.55
MSH6-214ENST00000616033 OR1J1Q8NGS3 322 aa11.62□□□□□ -0.55
MSH6-214ENST00000616033 MESP1Q9BRJ9 268 aa11.62□□□□□ -0.55
MSH6-214ENST00000616033 PRDM13Q9H4Q3 707 aa11.62□□□□□ -0.55
MSH6-214ENST00000616033 CBLN4Q9NTU7 201 aa11.62□□□□□ -0.55
MSH6-214ENST00000616033 ZNF407Q9C0G0 2248 aa11.62□□□□□ -0.55
MSH6-214ENST00000616033 LOC102724200A0A096LPH7 203 aaPredicted RBP11.62□□□□□ -0.55
MSH6-214ENST00000616033 RER1O15258 196 aa11.62□□□□□ -0.55
MSH6-214ENST00000616033 CDC14BO60729 498 aa11.62□□□□□ -0.55
MSH6-214ENST00000616033 TRGC2P03986 189 aa11.62□□□□□ -0.55
MSH6-214ENST00000616033 CRABP1P29762 137 aa11.62□□□□□ -0.55
MSH6-214ENST00000616033 ABCA11PQ4W5N1 156 aa11.62□□□□□ -0.55
MSH6-214ENST00000616033 LYZL2Q7Z4W2 148 aa11.62□□□□□ -0.55
MSH6-214ENST00000616033 SGPP2Q8IWX5 399 aa11.62□□□□□ -0.55
MSH6-214ENST00000616033 TNFSF14O43557 240 aa11.61□□□□□ -0.55
MSH6-214ENST00000616033 NUDT21O43809 227 aaKnown RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms