RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 FGF20Q9NP95 211 aaPredicted RBP13.93□□□□□ -0.18
CBWD3-211ENST00000615061 SNTG1Q9NSN8 517 aa13.93□□□□□ -0.18
CBWD3-211ENST00000615061 CLN8Q9UBY8 286 aa13.93□□□□□ -0.18
CBWD3-211ENST00000615061 OPN4Q9UHM6 478 aa13.93□□□□□ -0.18
CBWD3-211ENST00000615061 STAB1Q9NY15 2570 aa13.92□□□□□ -0.18
CBWD3-211ENST00000615061 ANKRD61A6NGH8 418 aa13.92□□□□□ -0.18
CBWD3-211ENST00000615061 OR5B21A6NL26 309 aa13.92□□□□□ -0.18
CBWD3-211ENST00000615061 DHRS7CA6NNS2 312 aa13.92□□□□□ -0.18
CBWD3-211ENST00000615061 UBCP0CG48 685 aaKnown RBP13.92□□□□□ -0.18
CBWD3-211ENST00000615061 AMY2BP19961 511 aa13.92□□□□□ -0.18
CBWD3-211ENST00000615061 ETV1P50549 477 aa13.92□□□□□ -0.18
CBWD3-211ENST00000615061 UBE2V2Q15819 145 aa13.92□□□□□ -0.18
CBWD3-211ENST00000615061 MICBQ29980 383 aa13.92□□□□□ -0.18
CBWD3-211ENST00000615061 SYS1Q8N2H4 156 aa13.92□□□□□ -0.18
CBWD3-211ENST00000615061 FGFRL1Q8N441 504 aa13.92□□□□□ -0.18
CBWD3-211ENST00000615061 AQP3Q92482 292 aa13.92□□□□□ -0.18
CBWD3-211ENST00000615061 INPP5EQ9NRR6 644 aa13.92□□□□□ -0.18
CBWD3-211ENST00000615061 OR5V1Q9UGF6 321 aa13.92□□□□□ -0.18
CBWD3-211ENST00000615061 INSIG2Q9Y5U4 225 aa13.92□□□□□ -0.18
CBWD3-211ENST00000615061 PPIAL4CA0A0B4J2A2 164 aa13.91□□□□□ -0.18
CBWD3-211ENST00000615061 OR4C45A6NMZ5 311 aa13.91□□□□□ -0.18
CBWD3-211ENST00000615061 H0YAE9 185 aa13.91□□□□□ -0.18
CBWD3-211ENST00000615061 AQP4P55087 323 aa13.91□□□□□ -0.18
CBWD3-211ENST00000615061 SRSF2Q01130 221 aaKnown RBP13.91□□□□□ -0.18
CBWD3-211ENST00000615061 IL18R1Q13478 541 aa13.91□□□□□ -0.18
CBWD3-211ENST00000615061 ALKBH1Q13686 389 aaKnown RBP13.91□□□□□ -0.18
CBWD3-211ENST00000615061 KCNJ8Q15842 424 aa13.91□□□□□ -0.18
CBWD3-211ENST00000615061 C8orf59Q8N0T1 100 aaPredicted RBP13.91□□□□□ -0.18
CBWD3-211ENST00000615061 OR10Z1Q8NGY1 313 aa13.91□□□□□ -0.18
CBWD3-211ENST00000615061 TRMT10AQ8TBZ6 339 aaKnown RBP13.91□□□□□ -0.18
CBWD3-211ENST00000615061 TFAP2CQ92754 450 aa13.91□□□□□ -0.18
CBWD3-211ENST00000615061 ADAT3Q96EY9 351 aaPredicted RBP13.91□□□□□ -0.18
CBWD3-211ENST00000615061 ZNF488Q96MN9 340 aa13.91□□□□□ -0.18
CBWD3-211ENST00000615061 TECTBQ96PL2 329 aa13.91□□□□□ -0.18
CBWD3-211ENST00000615061 CCL13Q99616 98 aa13.91□□□□□ -0.18
CBWD3-211ENST00000615061 ERVK-18Q9QC07 812 aa13.91□□□□□ -0.18
CBWD3-211ENST00000615061 PQLC2LA1A4F0 135 aa13.91□□□□□ -0.18
CBWD3-211ENST00000615061 C22orf46C9J442 243 aa13.91□□□□□ -0.18
CBWD3-211ENST00000615061 J3QLI3 93 aa13.91□□□□□ -0.18
CBWD3-211ENST00000615061 TMPRSS2O15393 492 aa13.91□□□□□ -0.18
CBWD3-211ENST00000615061 SYNGR1O43759 233 aa13.91□□□□□ -0.18
CBWD3-211ENST00000615061 MUC1P15941 1255 aaPredicted RBP13.91□□□□□ -0.18
CBWD3-211ENST00000615061 ZNF12P17014 697 aa13.91□□□□□ -0.18
CBWD3-211ENST00000615061 GATA3P23771 443 aa13.91□□□□□ -0.18
CBWD3-211ENST00000615061 HAAOP46952 286 aa13.91□□□□□ -0.18
CBWD3-211ENST00000615061 CCR9P51686 369 aa13.91□□□□□ -0.18
CBWD3-211ENST00000615061 GTF2A1P52655 376 aaPredicted RBP13.91□□□□□ -0.18
CBWD3-211ENST00000615061 OR2G6Q5TZ20 316 aa13.91□□□□□ -0.18
CBWD3-211ENST00000615061 TMEM244Q5VVB8 128 aa13.91□□□□□ -0.18
CBWD3-211ENST00000615061 XAF1Q6GPH4 301 aa13.91□□□□□ -0.18
CBWD3-211ENST00000615061 BATF2Q8N1L9 274 aa13.91□□□□□ -0.18
CBWD3-211ENST00000615061 DACT3Q96B18 629 aaPredicted RBP13.91□□□□□ -0.18
CBWD3-211ENST00000615061 VCXQ9H320 206 aa13.91□□□□□ -0.18
CBWD3-211ENST00000615061 XPNPEP2O43895 674 aa13.9□□□□□ -0.18
CBWD3-211ENST00000615061 ISG15P05161 165 aa13.9□□□□□ -0.18
CBWD3-211ENST00000615061 SELLP14151 372 aa13.9□□□□□ -0.18
CBWD3-211ENST00000615061 GLRA1P23415 457 aa13.9□□□□□ -0.18
CBWD3-211ENST00000615061 ANGPTL5Q86XS5 388 aa13.9□□□□□ -0.18
CBWD3-211ENST00000615061 CALHM1Q8IU99 346 aa13.9□□□□□ -0.18
CBWD3-211ENST00000615061 FAM216BQ8N7L0 139 aa13.9□□□□□ -0.18
CBWD3-211ENST00000615061 GGHQ92820 318 aa13.9□□□□□ -0.18
CBWD3-211ENST00000615061 MRPL48Q96GC5 212 aaKnown RBP13.9□□□□□ -0.18
CBWD3-211ENST00000615061 PDCD1LG2Q9BQ51 273 aa13.9□□□□□ -0.18
CBWD3-211ENST00000615061 JAM3Q9BX67 310 aa13.9□□□□□ -0.18
CBWD3-211ENST00000615061 CHST5Q9GZS9 411 aa13.9□□□□□ -0.18
CBWD3-211ENST00000615061 TRIM36Q9NQ86 728 aa13.9□□□□□ -0.18
CBWD3-211ENST00000615061 DNAJB11Q9UBS4 358 aa13.9□□□□□ -0.18
CBWD3-211ENST00000615061 CLEC2DQ9UHP7 191 aa13.9□□□□□ -0.18
CBWD3-211ENST00000615061 HSPE1-MOB4S4R3N1 261 aa13.9□□□□□ -0.18
CBWD3-211ENST00000615061 IGKV1-27A0A075B6S5 117 aa13.89□□□□□ -0.19
CBWD3-211ENST00000615061 IGHV2-70DA0A0C4DH43 119 aa13.89□□□□□ -0.19
CBWD3-211ENST00000615061 FAM230AA0A1W2PPH8 454 aa13.89□□□□□ -0.19
CBWD3-211ENST00000615061 NDUFA2O43678 99 aa13.89□□□□□ -0.19
CBWD3-211ENST00000615061 IFNA2P01563 188 aa13.89□□□□□ -0.19
CBWD3-211ENST00000615061 CPT2P23786 658 aa13.89□□□□□ -0.19
CBWD3-211ENST00000615061 DCKP27707 260 aa13.89□□□□□ -0.19
CBWD3-211ENST00000615061 STUMQ69YW2 141 aa13.89□□□□□ -0.19
CBWD3-211ENST00000615061 ZNF676Q8N7Q3 588 aa13.89□□□□□ -0.19
CBWD3-211ENST00000615061 FBLIM1Q8WUP2 373 aa13.89□□□□□ -0.19
CBWD3-211ENST00000615061 RAB40AQ8WXH6 277 aa13.89□□□□□ -0.19
CBWD3-211ENST00000615061 FGGYQ96C11 551 aa13.89□□□□□ -0.19
CBWD3-211ENST00000615061 KAAG1Q9UBP8 84 aa13.89□□□□□ -0.19
CBWD3-211ENST00000615061 H0YHG0 523 aa13.88□□□□□ -0.19
CBWD3-211ENST00000615061 DVL1O14640 695 aa13.88□□□□□ -0.19
CBWD3-211ENST00000615061 ZFPL1O95159 310 aa13.88□□□□□ -0.19
CBWD3-211ENST00000615061 HHLA2Q9UM44 414 aa13.88□□□□□ -0.19
CBWD3-211ENST00000615061 DIMT1Q9UNQ2 313 aaKnown RBP13.88□□□□□ -0.19
CBWD3-211ENST00000615061 AUP1Q9Y679 476 aa13.88□□□□□ -0.19
CBWD3-211ENST00000615061 IGKV1-9A0A0C4DH69 117 aa13.88□□□□□ -0.19
CBWD3-211ENST00000615061 J3QT63 122 aa13.88□□□□□ -0.19
CBWD3-211ENST00000615061 PAX8Q06710 450 aa13.88□□□□□ -0.19
CBWD3-211ENST00000615061 IKZF1Q13422 519 aa13.88□□□□□ -0.19
CBWD3-211ENST00000615061 C1QL2Q7Z5L3 287 aa13.88□□□□□ -0.19
CBWD3-211ENST00000615061 ZNF573Q86YE8 665 aa13.88□□□□□ -0.19
CBWD3-211ENST00000615061 CCDC54Q8NEL0 328 aa13.88□□□□□ -0.19
CBWD3-211ENST00000615061 ANGPTL6Q8NI99 470 aa13.88□□□□□ -0.19
CBWD3-211ENST00000615061 ZNF671Q8TAW3 534 aa13.88□□□□□ -0.19
CBWD3-211ENST00000615061 C12orf43Q96C57 262 aaKnown RBP13.88□□□□□ -0.19
CBWD3-211ENST00000615061 TMEM80Q96HE8 168 aa13.88□□□□□ -0.19
CBWD3-211ENST00000615061 MYCBPQ99417 103 aaPredicted RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms