RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 TRGC2P03986 189 aa12.41□□□□□ -0.42
CHD1-212ENST00000614616 RABIFP47224 123 aa12.41□□□□□ -0.42
CHD1-212ENST00000614616 INSL4Q14641 139 aa12.41□□□□□ -0.42
CHD1-212ENST00000614616 KHDC3LQ587J8 217 aa12.41□□□□□ -0.42
CHD1-212ENST00000614616 C16orf82Q7Z2V1 217 aa12.41□□□□□ -0.42
CHD1-212ENST00000614616 KLHDC7BQ96G42 594 aa12.41□□□□□ -0.42
CHD1-212ENST00000614616 RNF208Q9H0X6 261 aa12.41□□□□□ -0.42
CHD1-212ENST00000614616 BCL2L10Q9HD36 194 aa12.41□□□□□ -0.42
CHD1-212ENST00000614616 ARHGAP21Q5T5U3 1957 aa12.41□□□□□ -0.42
CHD1-212ENST00000614616 A0A1W2PN81 502 aa12.41□□□□□ -0.42
CHD1-212ENST00000614616 B4E171 279 aa12.41□□□□□ -0.42
CHD1-212ENST00000614616 SOD2P04179 222 aa12.41□□□□□ -0.42
CHD1-212ENST00000614616 TNFSF18Q9UNG2 199 aa12.41□□□□□ -0.42
CHD1-212ENST00000614616 CYB5R3P00387 301 aaPredicted RBP12.41□□□□□ -0.42
CHD1-212ENST00000614616 HHIPQ96QV1 700 aa12.41□□□□□ -0.42
CHD1-212ENST00000614616 IGKV6-21A0A0C4DH24 114 aa12.41□□□□□ -0.42
CHD1-212ENST00000614616 C16orf70Q9BSU1 422 aa12.41□□□□□ -0.42
CHD1-212ENST00000614616 PLSCR5A0PG75 271 aa12.41□□□□□ -0.42
CHD1-212ENST00000614616 TGFBR3Q03167 851 aa12.41□□□□□ -0.42
CHD1-212ENST00000614616 BCL2L2Q92843 193 aaPredicted RBP12.41□□□□□ -0.42
CHD1-212ENST00000614616 HSF4Q9ULV5 492 aa12.41□□□□□ -0.42
CHD1-212ENST00000614616 FCMRO60667 390 aa12.41□□□□□ -0.42
CHD1-212ENST00000614616 GLRA1P23415 457 aa12.41□□□□□ -0.42
CHD1-212ENST00000614616 OPRM1P35372 400 aa12.41□□□□□ -0.42
CHD1-212ENST00000614616 FGF8P55075 233 aaPredicted RBP12.41□□□□□ -0.42
CHD1-212ENST00000614616 CARFQ8N187 725 aa12.41□□□□□ -0.42
CHD1-212ENST00000614616 NRIP2Q9BQI9 281 aa12.41□□□□□ -0.42
CHD1-212ENST00000614616 EPHX3Q9H6B9 360 aa12.41□□□□□ -0.42
CHD1-212ENST00000614616 TICRRQ7Z2Z1 1910 aa12.41□□□□□ -0.42
CHD1-212ENST00000614616 C1SP09871 688 aa12.4□□□□□ -0.42
CHD1-212ENST00000614616 TRMT12Q53H54 448 aaKnown RBP12.4□□□□□ -0.42
CHD1-212ENST00000614616 SLC17A4Q9Y2C5 497 aa12.4□□□□□ -0.42
CHD1-212ENST00000614616 ZNF835Q9Y2P0 537 aa12.4□□□□□ -0.42
CHD1-212ENST00000614616 COA3Q9Y2R0 106 aaPredicted RBP12.4□□□□□ -0.42
CHD1-212ENST00000614616 C5orf52A6NGY3 159 aa12.4□□□□□ -0.42
CHD1-212ENST00000614616 LIPHQ8WWY8 451 aa12.4□□□□□ -0.42
CHD1-212ENST00000614616 OR2A5Q96R48 311 aa12.4□□□□□ -0.42
CHD1-212ENST00000614616 ZFP64Q9NPA5 681 aa12.4□□□□□ -0.42
CHD1-212ENST00000614616 PRAMEF25A6NGN4 478 aa12.4□□□□□ -0.42
CHD1-212ENST00000614616 DMWDQ09019 674 aa12.4□□□□□ -0.42
CHD1-212ENST00000614616 SHHQ15465 462 aa12.4□□□□□ -0.42
CHD1-212ENST00000614616 PRAMEF5Q5TYX0 476 aa12.4□□□□□ -0.42
CHD1-212ENST00000614616 PRAMEF6Q5VXH4 476 aa12.4□□□□□ -0.42
CHD1-212ENST00000614616 VN1R1Q9GZP7 353 aa12.4□□□□□ -0.42
CHD1-212ENST00000614616 PLXNA3P51805 1871 aa12.4□□□□□ -0.42
CHD1-212ENST00000614616 FDX2Q6P4F2 183 aa12.4□□□□□ -0.42
CHD1-212ENST00000614616 MED25Q71SY5 747 aa12.4□□□□□ -0.42
CHD1-212ENST00000614616 MRGPRGQ86SM5 289 aa12.4□□□□□ -0.42
CHD1-212ENST00000614616 LPAR4Q99677 370 aa12.4□□□□□ -0.42
CHD1-212ENST00000614616 CHST6Q9GZX3 395 aa12.4□□□□□ -0.42
CHD1-212ENST00000614616 NAA60Q9H7X0 242 aa12.4□□□□□ -0.42
CHD1-212ENST00000614616 A0A0U1RQS6 177 aa12.4□□□□□ -0.42
CHD1-212ENST00000614616 DNPH1O43598 174 aa12.4□□□□□ -0.42
CHD1-212ENST00000614616 ONECUT2O95948 504 aa12.4□□□□□ -0.42
CHD1-212ENST00000614616 APCSP02743 223 aa12.4□□□□□ -0.42
CHD1-212ENST00000614616 HPXP02790 462 aa12.4□□□□□ -0.42
CHD1-212ENST00000614616 HOXA6P31267 233 aa12.4□□□□□ -0.42
CHD1-212ENST00000614616 FAM3AP98173 230 aa12.4□□□□□ -0.42
CHD1-212ENST00000614616 SLAMF6Q96DU3 332 aa12.4□□□□□ -0.42
CHD1-212ENST00000614616 SDF2Q99470 211 aa12.4□□□□□ -0.42
CHD1-212ENST00000614616 ING1Q9UK53 422 aaPredicted RBP12.4□□□□□ -0.42
CHD1-212ENST00000614616 MCTS1Q9ULC4 181 aaKnown RBP12.4□□□□□ -0.42
CHD1-212ENST00000614616 ZNF253O75346 499 aa12.4□□□□□ -0.42
CHD1-212ENST00000614616 CA2P00918 260 aa12.4□□□□□ -0.42
CHD1-212ENST00000614616 CLDN17P56750 224 aa12.4□□□□□ -0.42
CHD1-212ENST00000614616 ERHP84090 104 aaKnown RBP12.4□□□□□ -0.42
CHD1-212ENST00000614616 CST6Q15828 149 aa12.4□□□□□ -0.42
CHD1-212ENST00000614616 SCD5Q86SK9 330 aa12.4□□□□□ -0.42
CHD1-212ENST00000614616 ALKBH7Q9BT30 221 aaPredicted RBP12.4□□□□□ -0.42
CHD1-212ENST00000614616 SFXN1Q9H9B4 322 aa12.4□□□□□ -0.42
CHD1-212ENST00000614616 GPR84Q9NQS5 396 aa12.4□□□□□ -0.42
CHD1-212ENST00000614616 PSMB5P28074 263 aa12.39□□□□□ -0.43
CHD1-212ENST00000614616 IL10RAQ13651 578 aa12.39□□□□□ -0.43
CHD1-212ENST00000614616 DUSP5Q16690 384 aa12.39□□□□□ -0.43
CHD1-212ENST00000614616 H1FNTQ75WM6 255 aaPredicted RBP12.39□□□□□ -0.43
CHD1-212ENST00000614616 OR52L2PQ8NGH6 319 aa12.39□□□□□ -0.43
CHD1-212ENST00000614616 LPAR5Q9H1C0 372 aa12.39□□□□□ -0.43
CHD1-212ENST00000614616 LYRM4Q9HD34 91 aa12.39□□□□□ -0.43
CHD1-212ENST00000614616 CBLN4Q9NTU7 201 aa12.39□□□□□ -0.43
CHD1-212ENST00000614616 LINC00587B1AMM8 73 aa12.39□□□□□ -0.43
CHD1-212ENST00000614616 CRYABP02511 175 aaKnown RBP12.39□□□□□ -0.43
CHD1-212ENST00000614616 NKG7Q16617 165 aa12.39□□□□□ -0.43
CHD1-212ENST00000614616 TMED7-TICAM2A0A0A6YYA0 188 aa12.39□□□□□ -0.43
CHD1-212ENST00000614616 ADAM20O43506 726 aa12.39□□□□□ -0.43
CHD1-212ENST00000614616 IGHA2P01877 340 aa12.39□□□□□ -0.43
CHD1-212ENST00000614616 PLPPR5Q32ZL2 321 aa12.39□□□□□ -0.43
CHD1-212ENST00000614616 TMED7Q9Y3B3 224 aa12.39□□□□□ -0.43
CHD1-212ENST00000614616 HEPACAM2A8MVW5 462 aa12.39□□□□□ -0.43
CHD1-212ENST00000614616 C11orf94C9JXX5 98 aa12.39□□□□□ -0.43
CHD1-212ENST00000614616 CBR3O75828 277 aa12.39□□□□□ -0.43
CHD1-212ENST00000614616 FKBP2P26885 142 aaKnown RBP12.39□□□□□ -0.43
CHD1-212ENST00000614616 SLC37A1P57057 533 aa12.39□□□□□ -0.43
CHD1-212ENST00000614616 LTC4SQ16873 150 aa12.39□□□□□ -0.43
CHD1-212ENST00000614616 ARIH2OSQ8N7S6 290 aa12.39□□□□□ -0.43
CHD1-212ENST00000614616 SLC16A11Q8NCK7 471 aa12.39□□□□□ -0.43
CHD1-212ENST00000614616 RGP1Q92546 391 aaPredicted RBP12.39□□□□□ -0.43
CHD1-212ENST00000614616 GHITMQ9H3K2 345 aa12.39□□□□□ -0.43
CHD1-212ENST00000614616 LY75O60449 1722 aa12.39□□□□□ -0.43
CHD1-212ENST00000614616 DNAJC13O75165 2243 aa12.39□□□□□ -0.43
CHD1-212ENST00000614616 TGIF2-C20orf24A0A0A6YYL0 155 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms