RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 FAM87AP0C7U9 286 aa7.92□□□□□ -1.14
TTC28-208ENST00000612946 HMGA2P52926 109 aa7.92□□□□□ -1.14
TTC28-208ENST00000612946 PLPP4Q5VZY2 271 aa7.92□□□□□ -1.14
TTC28-208ENST00000612946 GPA33Q99795 319 aa7.92□□□□□ -1.14
TTC28-208ENST00000612946 SH2D2AQ9NP31 389 aa7.92□□□□□ -1.14
TTC28-208ENST00000612946 PATJQ8NI35 1801 aa7.92□□□□□ -1.14
TTC28-208ENST00000612946 A0A087WWC5 75 aa7.92□□□□□ -1.14
TTC28-208ENST00000612946 B4DGG1 531 aa7.92□□□□□ -1.14
TTC28-208ENST00000612946 COX6CP09669 75 aa7.92□□□□□ -1.14
TTC28-208ENST00000612946 LMAN2Q12907 356 aa7.92□□□□□ -1.14
TTC28-208ENST00000612946 ELAVL1Q15717 326 aaKnown RBP7.92□□□□□ -1.14
TTC28-208ENST00000612946 COX20Q5RI15 118 aa7.92□□□□□ -1.14
TTC28-208ENST00000612946 TMPRSS9Q7Z410 1059 aa7.92□□□□□ -1.14
TTC28-208ENST00000612946 DIO2Q92813 273 aa7.92□□□□□ -1.14
TTC28-208ENST00000612946 ULBP2Q9BZM5 246 aa7.92□□□□□ -1.14
TTC28-208ENST00000612946 AAMDCQ9H7C9 122 aa7.92□□□□□ -1.14
TTC28-208ENST00000612946 SHANK1Q9Y566 2161 aa7.92□□□□□ -1.14
TTC28-208ENST00000612946 DSCR3O14972 297 aa7.92□□□□□ -1.14
TTC28-208ENST00000612946 GALR2O43603 387 aaPredicted RBP7.92□□□□□ -1.14
TTC28-208ENST00000612946 SEMG1P04279 462 aa7.92□□□□□ -1.14
TTC28-208ENST00000612946 SLC38A11Q08AI6 406 aa7.92□□□□□ -1.14
TTC28-208ENST00000612946 SMAGPQ0VAQ4 97 aa7.92□□□□□ -1.14
TTC28-208ENST00000612946 SPANXN5Q5MJ07 72 aa7.92□□□□□ -1.14
TTC28-208ENST00000612946 SLC48A1Q6P1K1 146 aa7.92□□□□□ -1.14
TTC28-208ENST00000612946 DEGS2Q6QHC5 323 aa7.92□□□□□ -1.14
TTC28-208ENST00000612946 STRADBQ9C0K7 418 aa7.92□□□□□ -1.14
TTC28-208ENST00000612946 CACNA1GO43497 2377 aa7.92□□□□□ -1.14
TTC28-208ENST00000612946 TAF1P21675 1872 aa7.92□□□□□ -1.14
TTC28-208ENST00000612946 HMGN4O00479 90 aa7.92□□□□□ -1.14
TTC28-208ENST00000612946 PRDX1Q06830 199 aaKnown RBP7.92□□□□□ -1.14
TTC28-208ENST00000612946 SFRP2Q96HF1 295 aa7.92□□□□□ -1.14
TTC28-208ENST00000612946 OR6C3Q9NZP0 311 aa7.92□□□□□ -1.14
TTC28-208ENST00000612946 KIAA1551Q9HCM1 1747 aa7.92□□□□□ -1.14
TTC28-208ENST00000612946 ZNF840PA6NDX5 716 aa7.92□□□□□ -1.14
TTC28-208ENST00000612946 COCHO43405 550 aa7.92□□□□□ -1.14
TTC28-208ENST00000612946 IRF3Q14653 427 aa7.92□□□□□ -1.14
TTC28-208ENST00000612946 JOSD1Q15040 202 aaPredicted RBP7.92□□□□□ -1.14
TTC28-208ENST00000612946 SPSB1Q96BD6 273 aa7.92□□□□□ -1.14
TTC28-208ENST00000612946 HAPLN2Q9GZV7 340 aa7.92□□□□□ -1.14
TTC28-208ENST00000612946 WNT11O96014 354 aa7.92□□□□□ -1.14
TTC28-208ENST00000612946 CA2P00918 260 aa7.92□□□□□ -1.14
TTC28-208ENST00000612946 PLA2G12AQ9BZM1 189 aa7.92□□□□□ -1.14
TTC28-208ENST00000612946 CHST11Q9NPF2 352 aa7.92□□□□□ -1.14
TTC28-208ENST00000612946 M0QZQ0 153 aa7.92□□□□□ -1.14
TTC28-208ENST00000612946 P2RY10O00398 339 aa7.92□□□□□ -1.14
TTC28-208ENST00000612946 PSMB2P49721 201 aa7.92□□□□□ -1.14
TTC28-208ENST00000612946 SELENOPP49908 381 aa7.92□□□□□ -1.14
TTC28-208ENST00000612946 TMEM33P57088 247 aa7.92□□□□□ -1.14
TTC28-208ENST00000612946 SSX1Q16384 188 aa7.92□□□□□ -1.14
TTC28-208ENST00000612946 C6orf132Q5T0Z8 1188 aa7.92□□□□□ -1.14
TTC28-208ENST00000612946 PLPP6Q8IY26 295 aa7.92□□□□□ -1.14
TTC28-208ENST00000612946 TMEM190Q8WZ59 177 aa7.92□□□□□ -1.14
TTC28-208ENST00000612946 ZNF764Q96H86 408 aaPredicted RBP7.92□□□□□ -1.14
TTC28-208ENST00000612946 TMEM38BQ9NVV0 291 aa7.92□□□□□ -1.14
TTC28-208ENST00000612946 NRAPQ86VF7 1730 aa7.92□□□□□ -1.14
TTC28-208ENST00000612946 ZNF860A6NHJ4 632 aa7.92□□□□□ -1.14
TTC28-208ENST00000612946 AQP7P3A6NL99 342 aa7.92□□□□□ -1.14
TTC28-208ENST00000612946 CTBSQ01459 385 aa7.92□□□□□ -1.14
TTC28-208ENST00000612946 FAM169BQ8N8A8 192 aa7.92□□□□□ -1.14
TTC28-208ENST00000612946 HHIPQ96QV1 700 aa7.92□□□□□ -1.14
TTC28-208ENST00000612946 CSF3RQ99062 836 aa7.92□□□□□ -1.14
TTC28-208ENST00000612946 KLK11Q9UBX7 282 aa7.92□□□□□ -1.14
TTC28-208ENST00000612946 LRRC30A6NM36 301 aa7.92□□□□□ -1.14
TTC28-208ENST00000612946 M0R296 226 aa7.92□□□□□ -1.14
TTC28-208ENST00000612946 LEFTY2O00292 366 aa7.92□□□□□ -1.14
TTC28-208ENST00000612946 KLF7O75840 302 aaPredicted RBP7.92□□□□□ -1.14
TTC28-208ENST00000612946 SEMA4FO95754 770 aa7.92□□□□□ -1.14
TTC28-208ENST00000612946 LCN2P80188 198 aa7.92□□□□□ -1.14
TTC28-208ENST00000612946 OR52B4Q8NGK2 314 aa7.92□□□□□ -1.14
TTC28-208ENST00000612946 CYB5D2Q8WUJ1 264 aa7.92□□□□□ -1.14
TTC28-208ENST00000612946 ST8SIA1Q92185 356 aa7.92□□□□□ -1.14
TTC28-208ENST00000612946 P2RY12Q9H244 342 aa7.92□□□□□ -1.14
TTC28-208ENST00000612946 XRCC2O43543 280 aa7.91□□□□□ -1.14
TTC28-208ENST00000612946 COX7A2P2O60397 106 aa7.91□□□□□ -1.14
TTC28-208ENST00000612946 HIST1H1EP10412 219 aaKnown RBP7.91□□□□□ -1.14
TTC28-208ENST00000612946 SLC6A12P48065 614 aa7.91□□□□□ -1.14
TTC28-208ENST00000612946 CDC34P49427 236 aaPredicted RBP7.91□□□□□ -1.14
TTC28-208ENST00000612946 ERGIC1Q969X5 290 aa7.91□□□□□ -1.14
TTC28-208ENST00000612946 TXNIPQ9H3M7 391 aa7.91□□□□□ -1.14
TTC28-208ENST00000612946 CTXND1A0A1B0GTU2 59 aa7.91□□□□□ -1.14
TTC28-208ENST00000612946 ZNF732B4DXR9 585 aa7.91□□□□□ -1.14
TTC28-208ENST00000612946 PRR18Q8N4B5 295 aa7.91□□□□□ -1.14
TTC28-208ENST00000612946 OR52N4Q8NGI2 321 aa7.91□□□□□ -1.14
TTC28-208ENST00000612946 LCORQ96JN0 433 aaPredicted RBP7.91□□□□□ -1.14
TTC28-208ENST00000612946 GLIPR2Q9H4G4 154 aa7.91□□□□□ -1.14
TTC28-208ENST00000612946 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.91□□□□□ -1.14
TTC28-208ENST00000612946 MBD1Q9UIS9 605 aaPredicted RBP7.91□□□□□ -1.14
TTC28-208ENST00000612946 ZNF816-ZNF321PA0A0X1KG74 233 aa7.91□□□□□ -1.14
TTC28-208ENST00000612946 CEBPDP49716 269 aaPredicted RBP7.91□□□□□ -1.14
TTC28-208ENST00000612946 ZNF542PQ5EBM4 170 aa7.91□□□□□ -1.14
TTC28-208ENST00000612946 PRSS36Q5K4E3 855 aa7.91□□□□□ -1.14
TTC28-208ENST00000612946 PRAMEF5Q5TYX0 476 aa7.91□□□□□ -1.14
TTC28-208ENST00000612946 PRAMEF6Q5VXH4 476 aa7.91□□□□□ -1.14
TTC28-208ENST00000612946 IGKV6-21A0A0C4DH24 114 aa7.91□□□□□ -1.14
TTC28-208ENST00000612946 NKX6-3A6NJ46 265 aa7.91□□□□□ -1.14
TTC28-208ENST00000612946 DUSP3P51452 185 aaPredicted RBP7.91□□□□□ -1.14
TTC28-208ENST00000612946 C17orf67Q0P5P2 114 aa7.91□□□□□ -1.14
TTC28-208ENST00000612946 HFEQ30201 348 aa7.91□□□□□ -1.14
TTC28-208ENST00000612946 LYPD8Q6UX82 237 aa7.91□□□□□ -1.14
TTC28-208ENST00000612946 LIPHQ8WWY8 451 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms