RNA–Protein interactions for RNA: ENST00000611736.5

VEGFA-226, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-226ENST00000611736 TMEM244Q5VVB8 128 aa21.67■■□□□ 1.06
VEGFA-226ENST00000611736 SYS1Q8N2H4 156 aa21.67■■□□□ 1.06
VEGFA-226ENST00000611736 CCDC54Q8NEL0 328 aa21.67■■□□□ 1.06
VEGFA-226ENST00000611736 FGF20Q9NP95 211 aaPredicted RBP21.67■■□□□ 1.06
VEGFA-226ENST00000611736 SNTG1Q9NSN8 517 aa21.67■■□□□ 1.06
VEGFA-226ENST00000611736 DNAJB11Q9UBS4 358 aa21.67■■□□□ 1.06
VEGFA-226ENST00000611736 OPN4Q9UHM6 478 aa21.67■■□□□ 1.06
VEGFA-226ENST00000611736 INSIG2Q9Y5U4 225 aa21.67■■□□□ 1.06
VEGFA-226ENST00000611736 H0YAE9 185 aa21.66■■□□□ 1.06
VEGFA-226ENST00000611736 ALKBH1Q13686 389 aaKnown RBP21.66■■□□□ 1.06
VEGFA-226ENST00000611736 C8orf59Q8N0T1 100 aaPredicted RBP21.66■■□□□ 1.06
VEGFA-226ENST00000611736 OR5T2Q8NGG2 359 aa21.66■■□□□ 1.06
VEGFA-226ENST00000611736 NPRL2Q8WTW4 380 aa21.66■■□□□ 1.06
VEGFA-226ENST00000611736 CCL13Q99616 98 aa21.66■■□□□ 1.06
VEGFA-226ENST00000611736 RASSF4Q9H2L5 321 aa21.66■■□□□ 1.06
VEGFA-226ENST00000611736 TMPRSS2O15393 492 aa21.65■■□□□ 1.06
VEGFA-226ENST00000611736 LIMS3P0CW19 117 aa21.65■■□□□ 1.06
VEGFA-226ENST00000611736 LIMS4P0CW20 117 aa21.65■■□□□ 1.06
VEGFA-226ENST00000611736 C1QL2Q7Z5L3 287 aa21.65■■□□□ 1.06
VEGFA-226ENST00000611736 TEX29Q8N6K0 151 aa21.65■■□□□ 1.06
VEGFA-226ENST00000611736 ZNF671Q8TAW3 534 aa21.65■■□□□ 1.06
VEGFA-226ENST00000611736 TRMT10AQ8TBZ6 339 aaKnown RBP21.65■■□□□ 1.06
VEGFA-226ENST00000611736 NRG4Q8WWG1 115 aa21.65■■□□□ 1.06
VEGFA-226ENST00000611736 AQP3Q92482 292 aa21.65■■□□□ 1.06
VEGFA-226ENST00000611736 SMURF1Q9HCE7 757 aa21.65■■□□□ 1.06
VEGFA-226ENST00000611736 METRNQ9UJH8 293 aa21.65■■□□□ 1.06
VEGFA-226ENST00000611736 HSPE1-MOB4S4R3N1 261 aa21.65■■□□□ 1.06
VEGFA-226ENST00000611736 IGHV2-70DA0A0C4DH43 119 aa21.64■■□□□ 1.05
VEGFA-226ENST00000611736 PQLC2LA1A4F0 135 aa21.64■■□□□ 1.05
VEGFA-226ENST00000611736 OR4C45A6NMZ5 311 aa21.64■■□□□ 1.05
VEGFA-226ENST00000611736 E9PI62 339 aa21.64■■□□□ 1.05
VEGFA-226ENST00000611736 GLRA1P23415 457 aa21.64■■□□□ 1.05
VEGFA-226ENST00000611736 HAAOP46952 286 aa21.64■■□□□ 1.05
VEGFA-226ENST00000611736 NPY4RP50391 375 aa21.64■■□□□ 1.05
VEGFA-226ENST00000611736 CCR9P51686 369 aa21.64■■□□□ 1.05
VEGFA-226ENST00000611736 PAX2Q02962 417 aa21.64■■□□□ 1.05
VEGFA-226ENST00000611736 BTNL3Q6UXE8 466 aa21.64■■□□□ 1.05
VEGFA-226ENST00000611736 ZNF573Q86YE8 665 aa21.64■■□□□ 1.05
VEGFA-226ENST00000611736 ZNF676Q8N7Q3 588 aa21.64■■□□□ 1.05
VEGFA-226ENST00000611736 RAB40AQ8WXH6 277 aa21.64■■□□□ 1.05
VEGFA-226ENST00000611736 C12orf43Q96C57 262 aaKnown RBP21.64■■□□□ 1.05
VEGFA-226ENST00000611736 MRI1Q9BV20 369 aa21.64■■□□□ 1.05
VEGFA-226ENST00000611736 SLC7A11Q9UPY5 501 aa21.64■■□□□ 1.05
VEGFA-226ENST00000611736 AUP1Q9Y679 476 aa21.64■■□□□ 1.05
VEGFA-226ENST00000611736 A0A1B0GW55 424 aa21.63■■□□□ 1.05
VEGFA-226ENST00000611736 FAM230AA0A1W2PPH8 454 aa21.63■■□□□ 1.05
VEGFA-226ENST00000611736 IRGMA1A4Y4 181 aa21.63■■□□□ 1.05
VEGFA-226ENST00000611736 C22orf46C9J442 243 aa21.63■■□□□ 1.05
VEGFA-226ENST00000611736 GATBO75879 557 aaKnown RBP21.63■■□□□ 1.05
VEGFA-226ENST00000611736 ISG15P05161 165 aa21.63■■□□□ 1.05
VEGFA-226ENST00000611736 DUX4L2P0CJ85 424 aa21.63■■□□□ 1.05
VEGFA-226ENST00000611736 DUX4L3P0CJ86 424 aa21.63■■□□□ 1.05
VEGFA-226ENST00000611736 DUX4L4P0CJ87 422 aa21.63■■□□□ 1.05
VEGFA-226ENST00000611736 DUX4L5P0CJ88 424 aa21.63■■□□□ 1.05
VEGFA-226ENST00000611736 DUX4L6P0CJ89 424 aa21.63■■□□□ 1.05
VEGFA-226ENST00000611736 DUX4L7P0CJ90 424 aa21.63■■□□□ 1.05
VEGFA-226ENST00000611736 DCKP27707 260 aa21.63■■□□□ 1.05
VEGFA-226ENST00000611736 ETV1P50549 477 aa21.63■■□□□ 1.05
VEGFA-226ENST00000611736 GBX2P52951 348 aaPredicted RBP21.63■■□□□ 1.05
VEGFA-226ENST00000611736 UBE2V2Q15819 145 aa21.63■■□□□ 1.05
VEGFA-226ENST00000611736 STUMQ69YW2 141 aa21.63■■□□□ 1.05
VEGFA-226ENST00000611736 DUX4L9Q6RFH8 374 aaPredicted RBP21.63■■□□□ 1.05
VEGFA-226ENST00000611736 OR10AC1Q8NH08 325 aa21.63■■□□□ 1.05
VEGFA-226ENST00000611736 NANPQ8TBE9 248 aa21.63■■□□□ 1.05
VEGFA-226ENST00000611736 ADAT3Q96EY9 351 aaPredicted RBP21.63■■□□□ 1.05
VEGFA-226ENST00000611736 NUDT16L1Q9BRJ7 211 aaKnown RBP21.63■■□□□ 1.05
VEGFA-226ENST00000611736 JAM3Q9BX67 310 aa21.63■■□□□ 1.05
VEGFA-226ENST00000611736 CHST5Q9GZS9 411 aa21.63■■□□□ 1.05
VEGFA-226ENST00000611736 DUX4Q9UBX2 424 aa21.63■■□□□ 1.05
VEGFA-226ENST00000611736 H0YHG0 523 aa21.62■■□□□ 1.05
VEGFA-226ENST00000611736 J3QT63 122 aa21.62■■□□□ 1.05
VEGFA-226ENST00000611736 DVL1O14640 695 aa21.62■■□□□ 1.05
VEGFA-226ENST00000611736 SYNGR1O43759 233 aa21.62■■□□□ 1.05
VEGFA-226ENST00000611736 SERPINA3P01011 423 aa21.62■■□□□ 1.05
VEGFA-226ENST00000611736 TFF1P04155 84 aa21.62■■□□□ 1.05
VEGFA-226ENST00000611736 ZNF20P17024 532 aa21.62■■□□□ 1.05
VEGFA-226ENST00000611736 FAM216BQ8N7L0 139 aa21.62■■□□□ 1.05
VEGFA-226ENST00000611736 OR51A4Q8NGJ6 313 aa21.62■■□□□ 1.05
VEGFA-226ENST00000611736 TFAP2CQ92754 450 aa21.62■■□□□ 1.05
VEGFA-226ENST00000611736 FGGYQ96C11 551 aa21.62■■□□□ 1.05
VEGFA-226ENST00000611736 C10orf35Q96D05 121 aa21.62■■□□□ 1.05
VEGFA-226ENST00000611736 ZNF488Q96MN9 340 aa21.62■■□□□ 1.05
VEGFA-226ENST00000611736 KAAG1Q9UBP8 84 aa21.62■■□□□ 1.05
VEGFA-226ENST00000611736 HHLA2Q9UM44 414 aa21.62■■□□□ 1.05
VEGFA-226ENST00000611736 FCN3O75636 299 aa21.61■■□□□ 1.05
VEGFA-226ENST00000611736 MYL12AP19105 171 aa21.61■■□□□ 1.05
VEGFA-226ENST00000611736 AQP4P55087 323 aa21.61■■□□□ 1.05
VEGFA-226ENST00000611736 PAX8Q06710 450 aa21.61■■□□□ 1.05
VEGFA-226ENST00000611736 MRPL28Q13084 256 aaKnown RBP21.61■■□□□ 1.05
VEGFA-226ENST00000611736 SLC36A1Q7Z2H8 476 aa21.61■■□□□ 1.05
VEGFA-226ENST00000611736 ANGPTL5Q86XS5 388 aa21.61■■□□□ 1.05
VEGFA-226ENST00000611736 EGFL6Q8IUX8 553 aa21.61■■□□□ 1.05
VEGFA-226ENST00000611736 FGFRL1Q8N441 504 aa21.61■■□□□ 1.05
VEGFA-226ENST00000611736 OR13C3Q8NGS6 347 aa21.61■■□□□ 1.05
VEGFA-226ENST00000611736 ST8SIA4Q92187 359 aa21.61■■□□□ 1.05
VEGFA-226ENST00000611736 DACT3Q96B18 629 aaPredicted RBP21.61■■□□□ 1.05
VEGFA-226ENST00000611736 TMIGD2Q96BF3 282 aa21.61■■□□□ 1.05
VEGFA-226ENST00000611736 NLKQ9UBE8 527 aa21.61■■□□□ 1.05
VEGFA-226ENST00000611736 DIMT1Q9UNQ2 313 aaKnown RBP21.61■■□□□ 1.05
VEGFA-226ENST00000611736 NKX6-3A6NJ46 265 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms