RNA–Protein interactions for RNA: ENST00000603633.2

LINC00221-201, long intergenic non-protein coding RNA 221, humanhuman

TSL 2 BASIC

Gene LINC00221, Length 1,656 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00221-201ENST00000603633 ZMYND11Q15326 602 aa13.18□□□□□ -0.3
LINC00221-201ENST00000603633 TMEM249Q2WGJ8 235 aa13.18□□□□□ -0.3
LINC00221-201ENST00000603633 KCTD21Q4G0X4 260 aa13.18□□□□□ -0.3
LINC00221-201ENST00000603633 ZNF826PQ6ZT77 177 aa13.18□□□□□ -0.3
LINC00221-201ENST00000603633 LHFPL2Q6ZUX7 228 aa13.18□□□□□ -0.3
LINC00221-201ENST00000603633 CLDND2Q8NHS1 167 aa13.18□□□□□ -0.3
LINC00221-201ENST00000603633 LRRC29Q8WV35 223 aa13.18□□□□□ -0.3
LINC00221-201ENST00000603633 RGP1Q92546 391 aaPredicted RBP13.18□□□□□ -0.3
LINC00221-201ENST00000603633 TMEM106AQ96A25 262 aa13.18□□□□□ -0.3
LINC00221-201ENST00000603633 PKIBQ9C010 78 aa13.18□□□□□ -0.3
LINC00221-201ENST00000603633 DCAF16Q9NXF7 216 aa13.18□□□□□ -0.3
LINC00221-201ENST00000603633 CKLFQ9UBR5 152 aa13.18□□□□□ -0.3
LINC00221-201ENST00000603633 PCDHB10Q9UN67 800 aa13.18□□□□□ -0.3
LINC00221-201ENST00000603633 LRCH1Q9Y2L9 728 aa13.18□□□□□ -0.3
LINC00221-201ENST00000603633 TRBV5-5A0A0J9YX44 114 aa13.17□□□□□ -0.3
LINC00221-201ENST00000603633 FAM230AA0A1W2PPH8 454 aa13.17□□□□□ -0.3
LINC00221-201ENST00000603633 J3QT63 122 aa13.17□□□□□ -0.3
LINC00221-201ENST00000603633 HSMCR30P0CW71 290 aa13.17□□□□□ -0.3
LINC00221-201ENST00000603633 MUC1P15941 1255 aaPredicted RBP13.17□□□□□ -0.3
LINC00221-201ENST00000603633 RAB3AP20336 220 aa13.17□□□□□ -0.3
LINC00221-201ENST00000603633 SOX2P48431 317 aa13.17□□□□□ -0.3
LINC00221-201ENST00000603633 TPBGQ13641 420 aa13.17□□□□□ -0.3
LINC00221-201ENST00000603633 HAGHLQ6PII5 290 aaPredicted RBP13.17□□□□□ -0.3
LINC00221-201ENST00000603633 GCSAMQ8N6F7 178 aa13.17□□□□□ -0.3
LINC00221-201ENST00000603633 MAPK1IP1LQ8NDC0 245 aa13.17□□□□□ -0.3
LINC00221-201ENST00000603633 FCGR1BQ92637 280 aa13.17□□□□□ -0.3
LINC00221-201ENST00000603633 MGLLQ99685 303 aa13.17□□□□□ -0.3
LINC00221-201ENST00000603633 TMEM165Q9HC07 324 aa13.17□□□□□ -0.3
LINC00221-201ENST00000603633 ACOT13Q9NPJ3 140 aa13.17□□□□□ -0.3
LINC00221-201ENST00000603633 PNMA8CA0A1B0GUJ8 204 aa13.16□□□□□ -0.3
LINC00221-201ENST00000603633 OOEPA6NGQ2 149 aa13.16□□□□□ -0.3
LINC00221-201ENST00000603633 MAGEB3O15480 346 aa13.16□□□□□ -0.3
LINC00221-201ENST00000603633 SULT1B1O43704 296 aa13.16□□□□□ -0.3
LINC00221-201ENST00000603633 ACAA1P09110 424 aaPredicted RBP13.16□□□□□ -0.3
LINC00221-201ENST00000603633 AZGP1P25311 298 aaKnown RBP13.16□□□□□ -0.3
LINC00221-201ENST00000603633 PSMA1P25786 263 aaKnown RBP13.16□□□□□ -0.3
LINC00221-201ENST00000603633 MTCP1P56278 107 aa13.16□□□□□ -0.3
LINC00221-201ENST00000603633 PPP3R1P63098 170 aa13.16□□□□□ -0.3
LINC00221-201ENST00000603633 EMX1Q04741 257 aaPredicted RBP13.16□□□□□ -0.3
LINC00221-201ENST00000603633 TRAM1Q15629 374 aa13.16□□□□□ -0.3
LINC00221-201ENST00000603633 MICBQ29980 383 aa13.16□□□□□ -0.3
LINC00221-201ENST00000603633 TEX36Q5VZQ5 186 aa13.16□□□□□ -0.3
LINC00221-201ENST00000603633 CYB5R2Q6BCY4 276 aa13.16□□□□□ -0.3
LINC00221-201ENST00000603633 ZNF773Q6PK81 442 aa13.16□□□□□ -0.3
LINC00221-201ENST00000603633 SPARTQ8N0X7 666 aa13.16□□□□□ -0.3
LINC00221-201ENST00000603633 OR13C9Q8NGT0 318 aa13.16□□□□□ -0.3
LINC00221-201ENST00000603633 AQP3Q92482 292 aa13.16□□□□□ -0.3
LINC00221-201ENST00000603633 C12orf43Q96C57 262 aaKnown RBP13.16□□□□□ -0.3
LINC00221-201ENST00000603633 OPALINQ96PE5 141 aa13.16□□□□□ -0.3
LINC00221-201ENST00000603633 NARFLQ9H6Q4 476 aa13.16□□□□□ -0.3
LINC00221-201ENST00000603633 ZNF665Q9H7R5 613 aa13.16□□□□□ -0.3
LINC00221-201ENST00000603633 RASL12Q9NYN1 266 aa13.16□□□□□ -0.3
LINC00221-201ENST00000603633 MIOXQ9UGB7 285 aa13.16□□□□□ -0.3
LINC00221-201ENST00000603633 IGKV1-9A0A0C4DH69 117 aa13.15□□□□□ -0.3
LINC00221-201ENST00000603633 SRRM5B3KS81 715 aa13.15□□□□□ -0.3
LINC00221-201ENST00000603633 ZNF879B4DU55 563 aa13.15□□□□□ -0.3
LINC00221-201ENST00000603633 NOS1APO75052 506 aaPredicted RBP13.15□□□□□ -0.3
LINC00221-201ENST00000603633 TNFAIP8O95379 198 aa13.15□□□□□ -0.3
LINC00221-201ENST00000603633 CYB5AP00167 134 aa13.15□□□□□ -0.3
LINC00221-201ENST00000603633 MPZP25189 248 aa13.15□□□□□ -0.3
LINC00221-201ENST00000603633 MAP2K4P45985 399 aa13.15□□□□□ -0.3
LINC00221-201ENST00000603633 RPS11P62280 158 aaKnown RBP eCLIP13.15□□□□□ -0.3
LINC00221-201ENST00000603633 IL24Q13007 206 aa13.15□□□□□ -0.3
LINC00221-201ENST00000603633 ZNF404Q494X3 552 aa13.15□□□□□ -0.3
LINC00221-201ENST00000603633 DMRTC1Q5HYR2 192 aa13.15□□□□□ -0.3
LINC00221-201ENST00000603633 DCDC5Q6ZRR9 648 aa13.15□□□□□ -0.3
LINC00221-201ENST00000603633 BOLLQ8N9W6 283 aaKnown RBP13.15□□□□□ -0.3
LINC00221-201ENST00000603633 TRMT10AQ8TBZ6 339 aaKnown RBP13.15□□□□□ -0.3
LINC00221-201ENST00000603633 C1orf159Q96HA4 380 aa13.15□□□□□ -0.3
LINC00221-201ENST00000603633 VPS13CQ709C8 3753 aa13.15□□□□□ -0.3
LINC00221-201ENST00000603633 WNT9BO14905 357 aa13.15□□□□□ -0.31
LINC00221-201ENST00000603633 GPX5O75715 221 aa13.15□□□□□ -0.31
LINC00221-201ENST00000603633 IGHV2-5P01817 119 aa13.15□□□□□ -0.31
LINC00221-201ENST00000603633 CPEP16870 476 aa13.15□□□□□ -0.31
LINC00221-201ENST00000603633 LMO4P61968 165 aa13.15□□□□□ -0.31
LINC00221-201ENST00000603633 LIPKQ5VXJ0 399 aa13.15□□□□□ -0.31
LINC00221-201ENST00000603633 ZNF529Q6P280 563 aa13.15□□□□□ -0.31
LINC00221-201ENST00000603633 NLRC3Q7RTR2 1065 aa13.15□□□□□ -0.31
LINC00221-201ENST00000603633 NPRL2Q8WTW4 380 aa13.15□□□□□ -0.31
LINC00221-201ENST00000603633 TMEM246Q9BRR3 403 aa13.15□□□□□ -0.31
LINC00221-201ENST00000603633 PATZ1Q9HBE1 687 aaKnown RBP13.15□□□□□ -0.31
LINC00221-201ENST00000603633 B4DSR2 109 aa13.14□□□□□ -0.31
LINC00221-201ENST00000603633 C3orf80F5H4A9 247 aa13.14□□□□□ -0.31
LINC00221-201ENST00000603633 AKR7A2O43488 359 aa13.14□□□□□ -0.31
LINC00221-201ENST00000603633 ZNF205O95201 554 aa13.14□□□□□ -0.31
LINC00221-201ENST00000603633 ALDOBP05062 364 aa13.14□□□□□ -0.31
LINC00221-201ENST00000603633 HCKP08631 526 aa13.14□□□□□ -0.31
LINC00221-201ENST00000603633 GLRA1P23415 457 aa13.14□□□□□ -0.31
LINC00221-201ENST00000603633 FAM201AQ5SY85 155 aa13.14□□□□□ -0.31
LINC00221-201ENST00000603633 UBE2UQ5VVX9 321 aa13.14□□□□□ -0.31
LINC00221-201ENST00000603633 SFRP4Q6FHJ7 346 aaPredicted RBP13.14□□□□□ -0.31
LINC00221-201ENST00000603633 MKXQ8IYA7 352 aa13.14□□□□□ -0.31
LINC00221-201ENST00000603633 LINC01356Q8N9X3 169 aa13.14□□□□□ -0.31
LINC00221-201ENST00000603633 POC1AQ8NBT0 407 aa13.14□□□□□ -0.31
LINC00221-201ENST00000603633 DEFB108BQ8NET1 73 aa13.14□□□□□ -0.31
LINC00221-201ENST00000603633 PHYHIPQ92561 330 aa13.14□□□□□ -0.31
LINC00221-201ENST00000603633 METTL17Q9H7H0 456 aaPredicted RBP13.14□□□□□ -0.31
LINC00221-201ENST00000603633 TMEM138Q9NPI0 162 aa13.14□□□□□ -0.31
LINC00221-201ENST00000603633 DNAJB11Q9UBS4 358 aa13.14□□□□□ -0.31
LINC00221-201ENST00000603633 FOXJ3Q9UPW0 622 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms