RNA–Protein interactions for RNA: ENST00000603232.6

CELF4-223, Transcript of CUGBP Elav-like family member 4, human

APPRIS ALT1 TSL 1 (best) BASIC

Gene CELF4, Length 1,906 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CELF4-223	ENST00000603232	CA11	O75493	328 aa		13.52	□□□□□ -0.25
CELF4-223	ENST00000603232	IGLV3-1	P01715	115 aa		13.52	□□□□□ -0.25
CELF4-223	ENST00000603232	ZNF17	P17021	662 aa		13.52	□□□□□ -0.25
CELF4-223	ENST00000603232	RFC3	P40938	356 aa		13.52	□□□□□ -0.25
CELF4-223	ENST00000603232	TMEM50B	P56557	158 aa		13.52	□□□□□ -0.25
CELF4-223	ENST00000603232	CLRN1	P58418	232 aa		13.52	□□□□□ -0.25
CELF4-223	ENST00000603232	SRSF3	P84103	164 aa	Known RBP	13.52	□□□□□ -0.25
CELF4-223	ENST00000603232	SURF2	Q15527	256 aa	Predicted RBP	13.52	□□□□□ -0.25
CELF4-223	ENST00000603232	OR8B12	Q8NGG6	310 aa		13.52	□□□□□ -0.25
CELF4-223	ENST00000603232	OR4A4P	Q8NGN8	299 aa		13.52	□□□□□ -0.25
CELF4-223	ENST00000603232	POC1B	Q8TC44	478 aa		13.52	□□□□□ -0.25
CELF4-223	ENST00000603232	ADAMTS17	Q8TE56	1095 aa		13.52	□□□□□ -0.25
CELF4-223	ENST00000603232	ARL11	Q969Q4	196 aa		13.52	□□□□□ -0.25
CELF4-223	ENST00000603232	ZNF775	Q96BV0	537 aa	Predicted RBP	13.52	□□□□□ -0.25
CELF4-223	ENST00000603232	NARS2	Q96I59	477 aa	Known RBP	13.52	□□□□□ -0.25
CELF4-223	ENST00000603232	WDR77	Q9BQA1	342 aa	Predicted RBP	13.52	□□□□□ -0.25
CELF4-223	ENST00000603232	EMC6	Q9BV81	110 aa		13.52	□□□□□ -0.25
CELF4-223	ENST00000603232	PTPRQ	Q9UMZ3	2332 aa		13.52	□□□□□ -0.25
CELF4-223	ENST00000603232	FOXI3	A8MTJ6	420 aa	Predicted RBP	13.51	□□□□□ -0.25
CELF4-223	ENST00000603232	SMAD9	O15198	467 aa	Known RBP	13.51	□□□□□ -0.25
CELF4-223	ENST00000603232	CELA2A	P08217	269 aa		13.51	□□□□□ -0.25
CELF4-223	ENST00000603232	PRF1	P14222	555 aa		13.51	□□□□□ -0.25
CELF4-223	ENST00000603232	DSP	P15924	2871 aa	Known RBP	13.51	□□□□□ -0.25
CELF4-223	ENST00000603232	PTGDS	P41222	190 aa		13.51	□□□□□ -0.25
CELF4-223	ENST00000603232	RAB13	P51153	203 aa		13.51	□□□□□ -0.25
CELF4-223	ENST00000603232	GRB2	P62993	217 aa	Known RBP	13.51	□□□□□ -0.25
CELF4-223	ENST00000603232	IL15RA	Q13261	267 aa		13.51	□□□□□ -0.25
CELF4-223	ENST00000603232	SSPN	Q14714	243 aa		13.51	□□□□□ -0.25
CELF4-223	ENST00000603232	ARL6IP1	Q15041	203 aa		13.51	□□□□□ -0.25
CELF4-223	ENST00000603232	PCOLCE	Q15113	449 aa		13.51	□□□□□ -0.25
CELF4-223	ENST00000603232	TMEM88	Q6PEY1	159 aa		13.51	□□□□□ -0.25
CELF4-223	ENST00000603232	IL34	Q6ZMJ4	242 aa		13.51	□□□□□ -0.25
CELF4-223	ENST00000603232		Q6ZSR3	168 aa		13.51	□□□□□ -0.25
CELF4-223	ENST00000603232	CPEB2	Q7Z5Q1	589 aa	Known RBP	13.51	□□□□□ -0.25
CELF4-223	ENST00000603232	TMEM104	Q8NE00	496 aa		13.51	□□□□□ -0.25
CELF4-223	ENST00000603232	DCUN1D4	Q92564	292 aa		13.51	□□□□□ -0.25
CELF4-223	ENST00000603232	USB1	Q9BQ65	265 aa	Known RBP	13.51	□□□□□ -0.25
CELF4-223	ENST00000603232	IFT22	Q9H7X7	185 aa		13.51	□□□□□ -0.25
CELF4-223	ENST00000603232	ACKR4	Q9NPB9	350 aa		13.51	□□□□□ -0.25
CELF4-223	ENST00000603232	PPP4R1L	Q9P1A2	415 aa		13.51	□□□□□ -0.25
CELF4-223	ENST00000603232	FLVCR1	Q9Y5Y0	555 aa		13.51	□□□□□ -0.25
CELF4-223	ENST00000603232		H0YIZ8	118 aa		13.51	□□□□□ -0.25
CELF4-223	ENST00000603232	MPIG6B	O95866	241 aa		13.51	□□□□□ -0.25
CELF4-223	ENST00000603232	COX6A1	P12074	109 aa		13.51	□□□□□ -0.25
CELF4-223	ENST00000603232	ZNF121	P58317	390 aa	Predicted RBP	13.51	□□□□□ -0.25
CELF4-223	ENST00000603232	PPA1	Q15181	289 aa		13.51	□□□□□ -0.25
CELF4-223	ENST00000603232	SGCA	Q16586	387 aa		13.51	□□□□□ -0.25
CELF4-223	ENST00000603232	PLEKHN1	Q494U1	663 aa	Predicted RBP	13.51	□□□□□ -0.25
CELF4-223	ENST00000603232	HAGHL	Q6PII5	290 aa	Predicted RBP	13.51	□□□□□ -0.25
CELF4-223	ENST00000603232	CLEC18B	Q6UXF7	455 aa		13.51	□□□□□ -0.25
CELF4-223	ENST00000603232	C16orf47	Q6ZP98	133 aa	Predicted RBP	13.51	□□□□□ -0.25
CELF4-223	ENST00000603232	ABHD12B	Q7Z5M8	362 aa	Predicted RBP	13.51	□□□□□ -0.25
CELF4-223	ENST00000603232	CBLN2	Q8IUK8	224 aa		13.51	□□□□□ -0.25
CELF4-223	ENST00000603232	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	13.51	□□□□□ -0.25
CELF4-223	ENST00000603232	SLC25A43	Q8WUT9	341 aa	Predicted RBP	13.51	□□□□□ -0.25
CELF4-223	ENST00000603232	SAT2	Q96F10	170 aa	Predicted RBP	13.51	□□□□□ -0.25
CELF4-223	ENST00000603232	TMEM41A	Q96HV5	264 aa		13.51	□□□□□ -0.25
CELF4-223	ENST00000603232	OXGR1	Q96P68	337 aa		13.51	□□□□□ -0.25
CELF4-223	ENST00000603232	ADAT1	Q9BUB4	502 aa	Known RBP	13.51	□□□□□ -0.25
CELF4-223	ENST00000603232	TLNRD1	Q9H1K6	362 aa		13.51	□□□□□ -0.25
CELF4-223	ENST00000603232	MMP26	Q9NRE1	261 aa		13.51	□□□□□ -0.25
CELF4-223	ENST00000603232	OSGIN2	Q9Y236	505 aa		13.51	□□□□□ -0.25
CELF4-223	ENST00000603232	IGHV1-45	A0A0A0MS14	117 aa		13.5	□□□□□ -0.25
CELF4-223	ENST00000603232	C2orf72	A6NCS6	295 aa		13.5	□□□□□ -0.25
CELF4-223	ENST00000603232	FIGNL2	A6NMB9	653 aa		13.5	□□□□□ -0.25
CELF4-223	ENST00000603232		H3BML4	177 aa		13.5	□□□□□ -0.25
CELF4-223	ENST00000603232	SOCS1	O15524	211 aa		13.5	□□□□□ -0.25
CELF4-223	ENST00000603232	HEXA	P06865	529 aa		13.5	□□□□□ -0.25
CELF4-223	ENST00000603232	CD63	P08962	238 aa		13.5	□□□□□ -0.25
CELF4-223	ENST00000603232	PET100	P0DJ07	73 aa		13.5	□□□□□ -0.25
CELF4-223	ENST00000603232	NR2C1	P13056	603 aa		13.5	□□□□□ -0.25
CELF4-223	ENST00000603232	ABO	P16442	354 aa		13.5	□□□□□ -0.25
CELF4-223	ENST00000603232	ADH6	P28332	368 aa		13.5	□□□□□ -0.25
CELF4-223	ENST00000603232	TAS2R46	P59540	309 aa		13.5	□□□□□ -0.25
CELF4-223	ENST00000603232	EIF5A	P63241	154 aa	Known RBP	13.5	□□□□□ -0.25
CELF4-223	ENST00000603232	SUPT4H1	P63272	117 aa	Known RBP	13.5	□□□□□ -0.25
CELF4-223	ENST00000603232	AIMP2	Q13155	320 aa	Known RBP	13.5	□□□□□ -0.25
CELF4-223	ENST00000603232	RTL6	Q6ICC9	239 aa		13.5	□□□□□ -0.25
CELF4-223	ENST00000603232	UNQ6126/PRO20091	Q6UXV3	157 aa		13.5	□□□□□ -0.25
CELF4-223	ENST00000603232	CCDC54	Q8NEL0	328 aa		13.5	□□□□□ -0.25
CELF4-223	ENST00000603232	OR5H2	Q8NGV7	314 aa		13.5	□□□□□ -0.25
CELF4-223	ENST00000603232	OR14K1	Q8NGZ2	314 aa		13.5	□□□□□ -0.25
CELF4-223	ENST00000603232	LILRB1	Q8NHL6	650 aa	Predicted RBP	13.5	□□□□□ -0.25
CELF4-223	ENST00000603232	WNT2B	Q93097	391 aa		13.5	□□□□□ -0.25
CELF4-223	ENST00000603232	RTBDN	Q9BSG5	229 aa	Predicted RBP	13.5	□□□□□ -0.25
CELF4-223	ENST00000603232	GPR84	Q9NQS5	396 aa		13.5	□□□□□ -0.25
CELF4-223	ENST00000603232	P4HTM	Q9NXG6	502 aa		13.5	□□□□□ -0.25
CELF4-223	ENST00000603232	MLX	Q9UH92	298 aa		13.5	□□□□□ -0.25
CELF4-223	ENST00000603232	WIF1	Q9Y5W5	379 aa		13.5	□□□□□ -0.25
CELF4-223	ENST00000603232	LOC102723996	A0A087X1L8	192 aa		13.49	□□□□□ -0.25
CELF4-223	ENST00000603232	C13orf42	A0A1B0GVH6	325 aa		13.49	□□□□□ -0.25
CELF4-223	ENST00000603232	KCNAB3	O43448	404 aa		13.49	□□□□□ -0.25
CELF4-223	ENST00000603232	NAT2	P11245	290 aa		13.49	□□□□□ -0.25
CELF4-223	ENST00000603232	ECI1	P42126	302 aa		13.49	□□□□□ -0.25
CELF4-223	ENST00000603232	RPL35	P42766	123 aa	Known RBP	13.49	□□□□□ -0.25
CELF4-223	ENST00000603232	OR3A4P	P47883	348 aa		13.49	□□□□□ -0.25
CELF4-223	ENST00000603232	AKR1C2	P52895	323 aa		13.49	□□□□□ -0.25
CELF4-223	ENST00000603232	LSM6	P62312	80 aa	Known RBP	13.49	□□□□□ -0.25
CELF4-223	ENST00000603232	AKR1C1	Q04828	323 aa		13.49	□□□□□ -0.25
CELF4-223	ENST00000603232	CHAF1B	Q13112	559 aa		13.49	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 44 ms