RNA–Protein interactions for RNA: ENST00000601150.5

TRIM28-215, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-215ENST00000601150 C7orf69Q9H7B7 122 aa14.05□□□□□ -0.16
TRIM28-215ENST00000601150 MMP26Q9NRE1 261 aa14.05□□□□□ -0.16
TRIM28-215ENST00000601150 ERVK-18Q9QC07 812 aa14.05□□□□□ -0.16
TRIM28-215ENST00000601150 PQLC2LA1A4F0 135 aa14.04□□□□□ -0.16
TRIM28-215ENST00000601150 OR4C45A6NMZ5 311 aa14.04□□□□□ -0.16
TRIM28-215ENST00000601150 H0YJX3 145 aa14.04□□□□□ -0.16
TRIM28-215ENST00000601150 GATBO75879 557 aaKnown RBP14.04□□□□□ -0.16
TRIM28-215ENST00000601150 AVPP01185 164 aa14.04□□□□□ -0.16
TRIM28-215ENST00000601150 NPY4RP50391 375 aa14.04□□□□□ -0.16
TRIM28-215ENST00000601150 GBX2P52951 348 aaPredicted RBP14.04□□□□□ -0.16
TRIM28-215ENST00000601150 HAGHLQ6PII5 290 aaPredicted RBP14.04□□□□□ -0.16
TRIM28-215ENST00000601150 ZNF841Q6ZN19 808 aa14.04□□□□□ -0.16
TRIM28-215ENST00000601150 ZNF573Q86YE8 665 aa14.04□□□□□ -0.16
TRIM28-215ENST00000601150 ZNF676Q8N7Q3 588 aa14.04□□□□□ -0.16
TRIM28-215ENST00000601150 ZNF671Q8TAW3 534 aa14.04□□□□□ -0.16
TRIM28-215ENST00000601150 NRG4Q8WWG1 115 aa14.04□□□□□ -0.16
TRIM28-215ENST00000601150 AQP3Q92482 292 aa14.04□□□□□ -0.16
TRIM28-215ENST00000601150 TFAP2CQ92754 450 aa14.04□□□□□ -0.16
TRIM28-215ENST00000601150 C12orf43Q96C57 262 aaKnown RBP14.04□□□□□ -0.16
TRIM28-215ENST00000601150 TECTBQ96PL2 329 aa14.04□□□□□ -0.16
TRIM28-215ENST00000601150 CTSZQ9UBR2 303 aa14.04□□□□□ -0.16
TRIM28-215ENST00000601150 DNAJB11Q9UBS4 358 aa14.04□□□□□ -0.16
TRIM28-215ENST00000601150 HHLA2Q9UM44 414 aa14.04□□□□□ -0.16
TRIM28-215ENST00000601150 SLC7A11Q9UPY5 501 aa14.04□□□□□ -0.16
TRIM28-215ENST00000601150 INSIG2Q9Y5U4 225 aa14.04□□□□□ -0.16
TRIM28-215ENST00000601150 LOC105371242A0A075B767 164 aa14.03□□□□□ -0.16
TRIM28-215ENST00000601150 AKR7A2O43488 359 aa14.03□□□□□ -0.16
TRIM28-215ENST00000601150 RHBDL1O75783 438 aa14.03□□□□□ -0.16
TRIM28-215ENST00000601150 SERPINA3P01011 423 aa14.03□□□□□ -0.16
TRIM28-215ENST00000601150 RPSAP08865 295 aaKnown RBP14.03□□□□□ -0.16
TRIM28-215ENST00000601150 CCDC159P0C7I6 412 aa14.03□□□□□ -0.16
TRIM28-215ENST00000601150 MYL12AP19105 171 aa14.03□□□□□ -0.16
TRIM28-215ENST00000601150 ETV1P50549 477 aa14.03□□□□□ -0.16
TRIM28-215ENST00000601150 GMFBP60983 142 aa14.03□□□□□ -0.16
TRIM28-215ENST00000601150 PAX2Q02962 417 aa14.03□□□□□ -0.16
TRIM28-215ENST00000601150 C1orf229Q6ZS94 237 aaPredicted RBP14.03□□□□□ -0.16
TRIM28-215ENST00000601150 C1QL2Q7Z5L3 287 aa14.03□□□□□ -0.16
TRIM28-215ENST00000601150 FBLIM1Q8WUP2 373 aa14.03□□□□□ -0.16
TRIM28-215ENST00000601150 PP6455Q8WZ26 134 aa14.03□□□□□ -0.16
TRIM28-215ENST00000601150 SEH1LQ96EE3 360 aa14.03□□□□□ -0.16
TRIM28-215ENST00000601150 MRI1Q9BV20 369 aa14.03□□□□□ -0.16
TRIM28-215ENST00000601150 CHST5Q9GZS9 411 aa14.03□□□□□ -0.16
TRIM28-215ENST00000601150 WDR13Q9H1Z4 485 aa14.03□□□□□ -0.16
TRIM28-215ENST00000601150 KAAG1Q9UBP8 84 aa14.03□□□□□ -0.16
TRIM28-215ENST00000601150 OPN4Q9UHM6 478 aa14.03□□□□□ -0.16
TRIM28-215ENST00000601150 DIMT1Q9UNQ2 313 aaKnown RBP14.03□□□□□ -0.16
TRIM28-215ENST00000601150 CAB39Q9Y376 341 aaPredicted RBP14.03□□□□□ -0.16
TRIM28-215ENST00000601150 EXOSC1Q9Y3B2 195 aaKnown RBP14.03□□□□□ -0.16
TRIM28-215ENST00000601150 MXRA5Q9NR99 2828 aa14.02□□□□□ -0.16
TRIM28-215ENST00000601150 IGHV2-70DA0A0C4DH43 119 aa14.02□□□□□ -0.17
TRIM28-215ENST00000601150 E9PI62 339 aa14.02□□□□□ -0.17
TRIM28-215ENST00000601150 J3QT63 122 aa14.02□□□□□ -0.17
TRIM28-215ENST00000601150 TMPRSS2O15393 492 aa14.02□□□□□ -0.17
TRIM28-215ENST00000601150 GLRA1P23415 457 aa14.02□□□□□ -0.17
TRIM28-215ENST00000601150 HAAOP46952 286 aa14.02□□□□□ -0.17
TRIM28-215ENST00000601150 TGM4P49221 684 aa14.02□□□□□ -0.17
TRIM28-215ENST00000601150 AQP4P55087 323 aa14.02□□□□□ -0.17
TRIM28-215ENST00000601150 MED21Q13503 144 aa14.02□□□□□ -0.17
TRIM28-215ENST00000601150 UBE2V2Q15819 145 aa14.02□□□□□ -0.17
TRIM28-215ENST00000601150 CD276Q5ZPR3 534 aa14.02□□□□□ -0.17
TRIM28-215ENST00000601150 STUMQ69YW2 141 aa14.02□□□□□ -0.17
TRIM28-215ENST00000601150 BTNL3Q6UXE8 466 aa14.02□□□□□ -0.17
TRIM28-215ENST00000601150 TMPRSS11AQ6ZMR5 421 aa14.02□□□□□ -0.17
TRIM28-215ENST00000601150 SLC36A1Q7Z2H8 476 aa14.02□□□□□ -0.17
TRIM28-215ENST00000601150 TRMT10AQ8TBZ6 339 aaKnown RBP14.02□□□□□ -0.17
TRIM28-215ENST00000601150 RAB40AQ8WXH6 277 aa14.02□□□□□ -0.17
TRIM28-215ENST00000601150 ADAT3Q96EY9 351 aaPredicted RBP14.02□□□□□ -0.17
TRIM28-215ENST00000601150 TMEM80Q96HE8 168 aa14.02□□□□□ -0.17
TRIM28-215ENST00000601150 CCL13Q99616 98 aa14.02□□□□□ -0.17
TRIM28-215ENST00000601150 VCX3BQ9H321 246 aa14.02□□□□□ -0.17
TRIM28-215ENST00000601150 METRNQ9UJH8 293 aa14.02□□□□□ -0.17
TRIM28-215ENST00000601150 POLDIP2Q9Y2S7 368 aa14.02□□□□□ -0.17
TRIM28-215ENST00000601150 FAM230AA0A1W2PPH8 454 aa14.01□□□□□ -0.17
TRIM28-215ENST00000601150 EFCAB10A6NFE3 127 aa14.01□□□□□ -0.17
TRIM28-215ENST00000601150 TMEM212A6NML5 194 aa14.01□□□□□ -0.17
TRIM28-215ENST00000601150 DVL1O14640 695 aa14.01□□□□□ -0.17
TRIM28-215ENST00000601150 PIPP12273 146 aaPredicted RBP14.01□□□□□ -0.17
TRIM28-215ENST00000601150 ZNF20P17024 532 aa14.01□□□□□ -0.17
TRIM28-215ENST00000601150 FUT6P51993 359 aa14.01□□□□□ -0.17
TRIM28-215ENST00000601150 SCGB2A2Q13296 93 aa14.01□□□□□ -0.17
TRIM28-215ENST00000601150 CNN3Q15417 329 aaKnown RBP14.01□□□□□ -0.17
TRIM28-215ENST00000601150 ATPAF1Q5TC12 328 aaPredicted RBP14.01□□□□□ -0.17
TRIM28-215ENST00000601150 LAIR2Q6ISS4 152 aa14.01□□□□□ -0.17
TRIM28-215ENST00000601150 POC1AQ8NBT0 407 aa14.01□□□□□ -0.17
TRIM28-215ENST00000601150 OR5T2Q8NGG2 359 aa14.01□□□□□ -0.17
TRIM28-215ENST00000601150 OR13C3Q8NGS6 347 aa14.01□□□□□ -0.17
TRIM28-215ENST00000601150 OR10AC1Q8NH08 325 aa14.01□□□□□ -0.17
TRIM28-215ENST00000601150 OR5AK2Q8NH90 309 aa14.01□□□□□ -0.17
TRIM28-215ENST00000601150 NANPQ8TBE9 248 aa14.01□□□□□ -0.17
TRIM28-215ENST00000601150 NPRL2Q8WTW4 380 aa14.01□□□□□ -0.17
TRIM28-215ENST00000601150 GGHQ92820 318 aa14.01□□□□□ -0.17
TRIM28-215ENST00000601150 DACT3Q96B18 629 aaPredicted RBP14.01□□□□□ -0.17
TRIM28-215ENST00000601150 TMIGD2Q96BF3 282 aa14.01□□□□□ -0.17
TRIM28-215ENST00000601150 FGGYQ96C11 551 aa14.01□□□□□ -0.17
TRIM28-215ENST00000601150 COMMD4Q9H0A8 199 aa14.01□□□□□ -0.17
TRIM28-215ENST00000601150 DNTTIP1Q9H147 329 aa14.01□□□□□ -0.17
TRIM28-215ENST00000601150 RASSF4Q9H2L5 321 aa14.01□□□□□ -0.17
TRIM28-215ENST00000601150 SMURF1Q9HCE7 757 aa14.01□□□□□ -0.17
TRIM28-215ENST00000601150 SNTG1Q9NSN8 517 aa14.01□□□□□ -0.17
TRIM28-215ENST00000601150 PLCXD1Q9NUJ7 323 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms