RNA–Protein interactions for RNA: ENST00000600012.5

UPF1-208, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 501 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-208ENST00000600012 CFL1P23528 166 aaKnown RBP10.77□□□□□ -0.69
UPF1-208ENST00000600012 SOX6P35712 828 aa10.77□□□□□ -0.69
UPF1-208ENST00000600012 DDOSTP39656 456 aa10.77□□□□□ -0.69
UPF1-208ENST00000600012 MAP2K3P46734 347 aa10.77□□□□□ -0.69
UPF1-208ENST00000600012 RORCP51449 518 aa10.77□□□□□ -0.69
UPF1-208ENST00000600012 PPP3R1P63098 170 aa10.77□□□□□ -0.69
UPF1-208ENST00000600012 SRSF2Q01130 221 aaKnown RBP10.77□□□□□ -0.69
UPF1-208ENST00000600012 RIPPLY1Q0D2K3 151 aa10.77□□□□□ -0.69
UPF1-208ENST00000600012 SNTB2Q13425 540 aaKnown RBP10.77□□□□□ -0.69
UPF1-208ENST00000600012 DMRTC1Q5HYR2 192 aa10.77□□□□□ -0.69
UPF1-208ENST00000600012 PGAP1Q75T13 922 aa10.77□□□□□ -0.69
UPF1-208ENST00000600012 SERPINA12Q8IW75 414 aa10.77□□□□□ -0.69
UPF1-208ENST00000600012 OR1M1Q8NGA1 313 aa10.77□□□□□ -0.69
UPF1-208ENST00000600012 OR5L1Q8NGL2 311 aa10.77□□□□□ -0.69
UPF1-208ENST00000600012 MCFD2Q8NI22 146 aa10.77□□□□□ -0.69
UPF1-208ENST00000600012 OR2J1Q9GZK6 312 aa10.77□□□□□ -0.69
UPF1-208ENST00000600012 PPP1R3EQ9H7J1 279 aa10.77□□□□□ -0.69
UPF1-208ENST00000600012 GPR173Q9NS66 373 aa10.77□□□□□ -0.69
UPF1-208ENST00000600012 DHRS7CA6NNS2 312 aa10.76□□□□□ -0.69
UPF1-208ENST00000600012 VSTM5A8MXK1 200 aa10.76□□□□□ -0.69
UPF1-208ENST00000600012 SULT1B1O43704 296 aa10.76□□□□□ -0.69
UPF1-208ENST00000600012 ERCC1P07992 297 aaPredicted RBP10.76□□□□□ -0.69
UPF1-208ENST00000600012 RAB3AP20336 220 aa10.76□□□□□ -0.69
UPF1-208ENST00000600012 GIFP27352 417 aa10.76□□□□□ -0.69
UPF1-208ENST00000600012 MPV17P39210 176 aa10.76□□□□□ -0.69
UPF1-208ENST00000600012 CR1LQ2VPA4 569 aa10.76□□□□□ -0.69
UPF1-208ENST00000600012 ZNF404Q494X3 552 aa10.76□□□□□ -0.69
UPF1-208ENST00000600012 IDNKQ5T6J7 187 aa10.76□□□□□ -0.69
UPF1-208ENST00000600012 HES5Q5TA89 166 aa10.76□□□□□ -0.69
UPF1-208ENST00000600012 DDI2Q5TDH0 399 aa10.76□□□□□ -0.69
UPF1-208ENST00000600012 OR2T2Q6IF00 324 aa10.76□□□□□ -0.69
UPF1-208ENST00000600012 SFXN4Q6P4A7 337 aa10.76□□□□□ -0.69
UPF1-208ENST00000600012 VHLLQ6RSH7 139 aa10.76□□□□□ -0.69
UPF1-208ENST00000600012 OR5AS1Q8N127 324 aa10.76□□□□□ -0.69
UPF1-208ENST00000600012 BHLHE23Q8NDY6 225 aa10.76□□□□□ -0.69
UPF1-208ENST00000600012 NUP37Q8NFH4 326 aa10.76□□□□□ -0.69
UPF1-208ENST00000600012 NPRL2Q8WTW4 380 aa10.76□□□□□ -0.69
UPF1-208ENST00000600012 NEU4Q8WWR8 484 aaPredicted RBP10.76□□□□□ -0.69
UPF1-208ENST00000600012 CMBLQ96DG6 245 aa10.76□□□□□ -0.69
UPF1-208ENST00000600012 CHST5Q9GZS9 411 aa10.76□□□□□ -0.69
UPF1-208ENST00000600012 C6orf62Q9GZU0 229 aaPredicted RBP10.76□□□□□ -0.69
UPF1-208ENST00000600012 OPA3Q9H6K4 179 aa10.76□□□□□ -0.69
UPF1-208ENST00000600012 ZNF442Q9H7R0 627 aa10.76□□□□□ -0.69
UPF1-208ENST00000600012 SMURF1Q9HCE7 757 aa10.76□□□□□ -0.69
UPF1-208ENST00000600012 CGGBP1Q9UFW8 167 aaPredicted RBP10.76□□□□□ -0.69
UPF1-208ENST00000600012 DAPK2Q9UIK4 370 aa10.76□□□□□ -0.69
UPF1-208ENST00000600012 FZR1Q9UM11 496 aa10.76□□□□□ -0.69
UPF1-208ENST00000600012 V9GY05 133 aa10.76□□□□□ -0.69
UPF1-208ENST00000600012 A0A0B4J203 849 aa10.75□□□□□ -0.69
UPF1-208ENST00000600012 IGKV1-9A0A0C4DH69 117 aa10.75□□□□□ -0.69
UPF1-208ENST00000600012 ZNF816-ZNF321PA0A0X1KG74 233 aa10.75□□□□□ -0.69
UPF1-208ENST00000600012 CD300LBA8K4G0 201 aa10.75□□□□□ -0.69
UPF1-208ENST00000600012 NOTOA8MTQ0 251 aa10.75□□□□□ -0.69
UPF1-208ENST00000600012 CLPXO76031 633 aa10.75□□□□□ -0.69
UPF1-208ENST00000600012 ATF1P18846 271 aa10.75□□□□□ -0.69
UPF1-208ENST00000600012 BDKRB2P30411 391 aa10.75□□□□□ -0.69
UPF1-208ENST00000600012 RAD52P43351 418 aa10.75□□□□□ -0.69
UPF1-208ENST00000600012 TMEM255AQ5JRV8 349 aa10.75□□□□□ -0.69
UPF1-208ENST00000600012 ZNF529Q6P280 563 aa10.75□□□□□ -0.69
UPF1-208ENST00000600012 FBXW12Q6X9E4 464 aa10.75□□□□□ -0.69
UPF1-208ENST00000600012 RNF144BQ7Z419 303 aa10.75□□□□□ -0.69
UPF1-208ENST00000600012 OR52N4Q8NGI2 321 aa10.75□□□□□ -0.69
UPF1-208ENST00000600012 OR5D14Q8NGL3 314 aa10.75□□□□□ -0.69
UPF1-208ENST00000600012 PP6455Q8WZ26 134 aa10.75□□□□□ -0.69
UPF1-208ENST00000600012 PIGCQ92535 297 aa10.75□□□□□ -0.69
UPF1-208ENST00000600012 HPS1Q92902 700 aa10.75□□□□□ -0.69
UPF1-208ENST00000600012 C10orf35Q96D05 121 aa10.75□□□□□ -0.69
UPF1-208ENST00000600012 SPACA5Q96QH8 159 aa10.75□□□□□ -0.69
UPF1-208ENST00000600012 BCL2L14Q9BZR8 327 aa10.75□□□□□ -0.69
UPF1-208ENST00000600012 NXF2Q9GZY0 626 aaKnown RBP10.75□□□□□ -0.69
UPF1-208ENST00000600012 GPR160Q9UJ42 338 aa10.75□□□□□ -0.69
UPF1-208ENST00000600012 LRP5LA4QPB2 252 aa10.74□□□□□ -0.69
UPF1-208ENST00000600012 ZNF850A8MQ14 1090 aa10.74□□□□□ -0.69
UPF1-208ENST00000600012 LILRA1O75019 489 aa10.74□□□□□ -0.69
UPF1-208ENST00000600012 HCKP08631 526 aa10.74□□□□□ -0.69
UPF1-208ENST00000600012 OCMP0CE72 109 aaPredicted RBP10.74□□□□□ -0.69
UPF1-208ENST00000600012 DAOP14920 347 aa10.74□□□□□ -0.69
UPF1-208ENST00000600012 AZGP1P25311 298 aaKnown RBP10.74□□□□□ -0.69
UPF1-208ENST00000600012 CLDN12P56749 244 aa10.74□□□□□ -0.69
UPF1-208ENST00000600012 UBE2V2Q15819 145 aa10.74□□□□□ -0.69
UPF1-208ENST00000600012 MSMPQ1L6U9 139 aa10.74□□□□□ -0.69
UPF1-208ENST00000600012 ALKBH6Q3KRA9 238 aa10.74□□□□□ -0.69
UPF1-208ENST00000600012 CLVS2Q5SYC1 327 aa10.74□□□□□ -0.69
UPF1-208ENST00000600012 ZBTB37Q5TC79 503 aa10.74□□□□□ -0.69
UPF1-208ENST00000600012 PLCXD3Q63HM9 321 aa10.74□□□□□ -0.69
UPF1-208ENST00000600012 TMEM42Q69YG0 159 aa10.74□□□□□ -0.69
UPF1-208ENST00000600012 UNQ6126/PRO20091Q6UXV3 157 aa10.74□□□□□ -0.69
UPF1-208ENST00000600012 MOB3CQ70IA8 216 aa10.74□□□□□ -0.69
UPF1-208ENST00000600012 UTS2BQ765I0 119 aa10.74□□□□□ -0.69
UPF1-208ENST00000600012 JAGN1Q8N5M9 183 aa10.74□□□□□ -0.69
UPF1-208ENST00000600012 TRMT10AQ8TBZ6 339 aaKnown RBP10.74□□□□□ -0.69
UPF1-208ENST00000600012 TBC1D15Q8TC07 691 aa10.74□□□□□ -0.69
UPF1-208ENST00000600012 KLF14Q8TD94 323 aaPredicted RBP10.74□□□□□ -0.69
UPF1-208ENST00000600012 UBASH3BQ8TF42 649 aa10.74□□□□□ -0.69
UPF1-208ENST00000600012 DVL3Q92997 716 aaPredicted RBP10.74□□□□□ -0.69
UPF1-208ENST00000600012 MARS2Q96GW9 593 aaKnown RBP10.74□□□□□ -0.69
UPF1-208ENST00000600012 TSC22D3Q99576 134 aa10.74□□□□□ -0.69
UPF1-208ENST00000600012 PAPOLGQ9BWT3 736 aaKnown RBP10.74□□□□□ -0.69
UPF1-208ENST00000600012 PLGRKTQ9HBL7 147 aa10.74□□□□□ -0.69
UPF1-208ENST00000600012 DYNLRB1Q9NP97 96 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms