RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 DHRS3O75911 302 aa12.42□□□□□ -0.42
LIG1-215ENST00000597901 OR2T7P0C7T2 308 aa12.42□□□□□ -0.42
LIG1-215ENST00000597901 SELLP14151 372 aa12.42□□□□□ -0.42
LIG1-215ENST00000597901 HTR1FP30939 366 aa12.42□□□□□ -0.42
LIG1-215ENST00000597901 DGUOKQ16854 277 aa12.42□□□□□ -0.42
LIG1-215ENST00000597901 BCL2L15Q5TBC7 163 aa12.42□□□□□ -0.42
LIG1-215ENST00000597901 PLCXD3Q63HM9 321 aa12.42□□□□□ -0.42
LIG1-215ENST00000597901 SSX6Q7RTT6 188 aa12.42□□□□□ -0.42
LIG1-215ENST00000597901 OR8J1Q8NGP2 316 aa12.42□□□□□ -0.42
LIG1-215ENST00000597901 OR14K1Q8NGZ2 314 aa12.42□□□□□ -0.42
LIG1-215ENST00000597901 OR2T27Q8NH04 317 aa12.42□□□□□ -0.42
LIG1-215ENST00000597901 PYDC1Q8WXC3 89 aa12.42□□□□□ -0.42
LIG1-215ENST00000597901 AQP3Q92482 292 aa12.42□□□□□ -0.42
LIG1-215ENST00000597901 TAF15Q92804 592 aaKnown RBP eCLIP12.42□□□□□ -0.42
LIG1-215ENST00000597901 UBE2FQ969M7 185 aa12.42□□□□□ -0.42
LIG1-215ENST00000597901 EME1Q96AY2 570 aa12.42□□□□□ -0.42
LIG1-215ENST00000597901 TMIGD2Q96BF3 282 aa12.42□□□□□ -0.42
LIG1-215ENST00000597901 GAFA1Q96PS6 74 aa12.42□□□□□ -0.42
LIG1-215ENST00000597901 TBX5Q99593 518 aa12.42□□□□□ -0.42
LIG1-215ENST00000597901 DCTN5Q9BTE1 182 aa12.42□□□□□ -0.42
LIG1-215ENST00000597901 GABARAPL3Q9BY60 117 aa12.42□□□□□ -0.42
LIG1-215ENST00000597901 ACOXLQ9NUZ1 547 aa12.42□□□□□ -0.42
LIG1-215ENST00000597901 SLC22A13Q9Y226 551 aa12.42□□□□□ -0.42
LIG1-215ENST00000597901 PCDHGB1Q9Y5G3 927 aa12.42□□□□□ -0.42
LIG1-215ENST00000597901 V9GYS6 101 aa12.42□□□□□ -0.42
LIG1-215ENST00000597901 A0A1W2PQL4 384 aaPredicted RBP12.41□□□□□ -0.42
LIG1-215ENST00000597901 RPP14O95059 124 aaKnown RBP12.41□□□□□ -0.42
LIG1-215ENST00000597901 KRT8P05787 483 aa12.41□□□□□ -0.42
LIG1-215ENST00000597901 PSG2P11465 335 aa12.41□□□□□ -0.42
LIG1-215ENST00000597901 GABRA2P47869 451 aa12.41□□□□□ -0.42
LIG1-215ENST00000597901 IL13RA1P78552 427 aa12.41□□□□□ -0.42
LIG1-215ENST00000597901 CLVS2Q5SYC1 327 aa12.41□□□□□ -0.42
LIG1-215ENST00000597901 ZNF684Q5T5D7 378 aa12.41□□□□□ -0.42
LIG1-215ENST00000597901 TMEM42Q69YG0 159 aa12.41□□□□□ -0.42
LIG1-215ENST00000597901 HAGHLQ6PII5 290 aaPredicted RBP12.41□□□□□ -0.42
LIG1-215ENST00000597901 Q6ZSR3 168 aa12.41□□□□□ -0.42
LIG1-215ENST00000597901 VMO1Q7Z5L0 202 aa12.41□□□□□ -0.42
LIG1-215ENST00000597901 PDZD9Q8IXQ8 264 aa12.41□□□□□ -0.42
LIG1-215ENST00000597901 YIPF7Q8N8F6 280 aa12.41□□□□□ -0.42
LIG1-215ENST00000597901 C8orf46Q8TAG6 207 aa12.41□□□□□ -0.42
LIG1-215ENST00000597901 H1FXQ92522 213 aaKnown RBP12.41□□□□□ -0.42
LIG1-215ENST00000597901 RBM4BQ9BQ04 359 aaKnown RBP12.41□□□□□ -0.42
LIG1-215ENST00000597901 MOB1AQ9H8S9 216 aa12.41□□□□□ -0.42
LIG1-215ENST00000597901 TNFRSF19Q9NS68 423 aa12.41□□□□□ -0.42
LIG1-215ENST00000597901 RASL12Q9NYN1 266 aa12.41□□□□□ -0.42
LIG1-215ENST00000597901 ONECUT1Q9UBC0 465 aa12.41□□□□□ -0.42
LIG1-215ENST00000597901 SLC25A10Q9UBX3 287 aaPredicted RBP12.41□□□□□ -0.42
LIG1-215ENST00000597901 MAB21L2Q9Y586 359 aa12.41□□□□□ -0.42
LIG1-215ENST00000597901 IGKV1D-17A0A075B6S4 117 aa12.4□□□□□ -0.42
LIG1-215ENST00000597901 A0A1B0GVI7 797 aa12.4□□□□□ -0.42
LIG1-215ENST00000597901 A6NIN4 97 aa12.4□□□□□ -0.42
LIG1-215ENST00000597901 NKX6-3A6NJ46 265 aa12.4□□□□□ -0.42
LIG1-215ENST00000597901 METTL15A6NJ78 407 aa12.4□□□□□ -0.42
LIG1-215ENST00000597901 DLGAP1O14490 977 aa12.4□□□□□ -0.42
LIG1-215ENST00000597901 SIGLEC5O15389 551 aa12.4□□□□□ -0.42
LIG1-215ENST00000597901 APOL3O95236 402 aa12.4□□□□□ -0.42
LIG1-215ENST00000597901 MELTFP08582 738 aa12.4□□□□□ -0.42
LIG1-215ENST00000597901 ATP6V1E1P36543 226 aa12.4□□□□□ -0.42
LIG1-215ENST00000597901 TMED1Q13445 227 aa12.4□□□□□ -0.42
LIG1-215ENST00000597901 ZNF573Q86YE8 665 aa12.4□□□□□ -0.42
LIG1-215ENST00000597901 CMTM4Q8IZR5 234 aa12.4□□□□□ -0.42
LIG1-215ENST00000597901 TMEM86BQ8N661 226 aa12.4□□□□□ -0.42
LIG1-215ENST00000597901 Q8N7P7 452 aa12.4□□□□□ -0.42
LIG1-215ENST00000597901 TRUB1Q8WWH5 349 aaKnown RBP12.4□□□□□ -0.42
LIG1-215ENST00000597901 GPR173Q9NS66 373 aa12.4□□□□□ -0.42
LIG1-215ENST00000597901 DOCK11Q5JSL3 2073 aa12.39□□□□□ -0.43
LIG1-215ENST00000597901 A0A0U1RQK1 487 aa12.39□□□□□ -0.43
LIG1-215ENST00000597901 FAM181BA6NEQ2 426 aa12.39□□□□□ -0.43
LIG1-215ENST00000597901 POM121CA8CG34 1229 aa12.39□□□□□ -0.43
LIG1-215ENST00000597901 NOS1APO75052 506 aaPredicted RBP12.39□□□□□ -0.43
LIG1-215ENST00000597901 SULT1C4O75897 302 aa12.39□□□□□ -0.43
LIG1-215ENST00000597901 NDUFB7P17568 137 aa12.39□□□□□ -0.43
LIG1-215ENST00000597901 HAAOP46952 286 aa12.39□□□□□ -0.43
LIG1-215ENST00000597901 CAV3P56539 151 aa12.39□□□□□ -0.43
LIG1-215ENST00000597901 CDC42P60953 191 aa12.39□□□□□ -0.43
LIG1-215ENST00000597901 KPNB1Q14974 876 aaKnown RBP12.39□□□□□ -0.43
LIG1-215ENST00000597901 SHISA2Q6UWI4 295 aa12.39□□□□□ -0.43
LIG1-215ENST00000597901 C1orf122Q6ZSJ8 110 aa12.39□□□□□ -0.43
LIG1-215ENST00000597901 CATSPERDQ86XM0 798 aa12.39□□□□□ -0.43
LIG1-215ENST00000597901 PIP4P2Q8N4L2 257 aa12.39□□□□□ -0.43
LIG1-215ENST00000597901 KIR3DL3Q8N743 410 aa12.39□□□□□ -0.43
LIG1-215ENST00000597901 ZNRF1Q8ND25 227 aa12.39□□□□□ -0.43
LIG1-215ENST00000597901 OR10H4Q8NGA5 316 aa12.39□□□□□ -0.43
LIG1-215ENST00000597901 TBC1D15Q8TC07 691 aa12.39□□□□□ -0.43
LIG1-215ENST00000597901 RORBQ92753 470 aa12.39□□□□□ -0.43
LIG1-215ENST00000597901 RFKQ969G6 155 aa12.39□□□□□ -0.43
LIG1-215ENST00000597901 SDSLQ96GA7 329 aa12.39□□□□□ -0.43
LIG1-215ENST00000597901 ZNF488Q96MN9 340 aa12.39□□□□□ -0.43
LIG1-215ENST00000597901 UNKLQ9H9P5 680 aaKnown RBP12.39□□□□□ -0.43
LIG1-215ENST00000597901 ZNF222Q9UK12 451 aa12.39□□□□□ -0.43
LIG1-215ENST00000597901 TENM1Q9UKZ4 2725 aa12.38□□□□□ -0.43
LIG1-215ENST00000597901 PQLC2LA1A4F0 135 aa12.38□□□□□ -0.43
LIG1-215ENST00000597901 DHRS7CA6NNS2 312 aa12.38□□□□□ -0.43
LIG1-215ENST00000597901 H3BNX3 289 aa12.38□□□□□ -0.43
LIG1-215ENST00000597901 SYNGR1O43759 233 aa12.38□□□□□ -0.43
LIG1-215ENST00000597901 ALPLP05186 524 aa12.38□□□□□ -0.43
LIG1-215ENST00000597901 CCL1P22362 96 aa12.38□□□□□ -0.43
LIG1-215ENST00000597901 OMGP23515 440 aa12.38□□□□□ -0.43
LIG1-215ENST00000597901 PRDX2P32119 198 aa12.38□□□□□ -0.43
LIG1-215ENST00000597901 PRB3Q04118 309 aaPredicted RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms