RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 RDH10Q8IZV5 341 aa13.92□□□□□ -0.18
SSBP4-204ENST00000597724 SETD9Q8NE22 299 aa13.92□□□□□ -0.18
SSBP4-204ENST00000597724 RAB40AQ8WXH6 277 aa13.92□□□□□ -0.18
SSBP4-204ENST00000597724 AQP3Q92482 292 aa13.92□□□□□ -0.18
SSBP4-204ENST00000597724 WDR13Q9H1Z4 485 aa13.92□□□□□ -0.18
SSBP4-204ENST00000597724 ISG20L2Q9H9L3 353 aaKnown RBP13.92□□□□□ -0.18
SSBP4-204ENST00000597724 PLEKHA1Q9HB21 404 aa13.92□□□□□ -0.18
SSBP4-204ENST00000597724 FGF20Q9NP95 211 aaPredicted RBP13.92□□□□□ -0.18
SSBP4-204ENST00000597724 METRNQ9UJH8 293 aa13.92□□□□□ -0.18
SSBP4-204ENST00000597724 IGHV2-70DA0A0C4DH43 119 aa13.91□□□□□ -0.18
SSBP4-204ENST00000597724 KIR2DS1A0A191URI9 304 aa13.91□□□□□ -0.18
SSBP4-204ENST00000597724 PQLC2LA1A4F0 135 aa13.91□□□□□ -0.18
SSBP4-204ENST00000597724 ANKRD61A6NGH8 418 aa13.91□□□□□ -0.18
SSBP4-204ENST00000597724 H0YAE9 185 aa13.91□□□□□ -0.18
SSBP4-204ENST00000597724 FSHBP01225 129 aa13.91□□□□□ -0.18
SSBP4-204ENST00000597724 ISG15P05161 165 aa13.91□□□□□ -0.18
SSBP4-204ENST00000597724 CAPGP40121 348 aa13.91□□□□□ -0.18
SSBP4-204ENST00000597724 SLC34A1Q06495 639 aa13.91□□□□□ -0.18
SSBP4-204ENST00000597724 PAX8Q06710 450 aa13.91□□□□□ -0.18
SSBP4-204ENST00000597724 IL18R1Q13478 541 aa13.91□□□□□ -0.18
SSBP4-204ENST00000597724 HAGHLQ6PII5 290 aaPredicted RBP13.91□□□□□ -0.18
SSBP4-204ENST00000597724 NANPQ8TBE9 248 aa13.91□□□□□ -0.18
SSBP4-204ENST00000597724 C12orf43Q96C57 262 aaKnown RBP13.91□□□□□ -0.18
SSBP4-204ENST00000597724 TECTBQ96PL2 329 aa13.91□□□□□ -0.18
SSBP4-204ENST00000597724 CCL13Q99616 98 aa13.91□□□□□ -0.18
SSBP4-204ENST00000597724 JAM3Q9BX67 310 aa13.91□□□□□ -0.18
SSBP4-204ENST00000597724 RASSF4Q9H2L5 321 aa13.91□□□□□ -0.18
SSBP4-204ENST00000597724 SMURF1Q9HCE7 757 aa13.91□□□□□ -0.18
SSBP4-204ENST00000597724 AUP1Q9Y679 476 aa13.91□□□□□ -0.18
SSBP4-204ENST00000597724 HSPE1-MOB4S4R3N1 261 aa13.91□□□□□ -0.18
SSBP4-204ENST00000597724 OR4C45A6NMZ5 311 aa13.9□□□□□ -0.18
SSBP4-204ENST00000597724 DVL1O14640 695 aa13.9□□□□□ -0.18
SSBP4-204ENST00000597724 TMPRSS2O15393 492 aa13.9□□□□□ -0.18
SSBP4-204ENST00000597724 FCN3O75636 299 aa13.9□□□□□ -0.18
SSBP4-204ENST00000597724 GNAO1P09471 354 aa13.9□□□□□ -0.18
SSBP4-204ENST00000597724 LIMS3P0CW19 117 aa13.9□□□□□ -0.18
SSBP4-204ENST00000597724 LIMS4P0CW20 117 aa13.9□□□□□ -0.18
SSBP4-204ENST00000597724 GMFBP60983 142 aa13.9□□□□□ -0.18
SSBP4-204ENST00000597724 ALKBH1Q13686 389 aaKnown RBP13.9□□□□□ -0.18
SSBP4-204ENST00000597724 UBE2V2Q15819 145 aa13.9□□□□□ -0.18
SSBP4-204ENST00000597724 ATPAF1Q5TC12 328 aaPredicted RBP13.9□□□□□ -0.18
SSBP4-204ENST00000597724 CD276Q5ZPR3 534 aa13.9□□□□□ -0.18
SSBP4-204ENST00000597724 STUMQ69YW2 141 aa13.9□□□□□ -0.18
SSBP4-204ENST00000597724 BTNL3Q6UXE8 466 aa13.9□□□□□ -0.18
SSBP4-204ENST00000597724 ZNF573Q86YE8 665 aa13.9□□□□□ -0.18
SSBP4-204ENST00000597724 OR5T2Q8NGG2 359 aa13.9□□□□□ -0.18
SSBP4-204ENST00000597724 ZNF671Q8TAW3 534 aa13.9□□□□□ -0.18
SSBP4-204ENST00000597724 C10orf35Q96D05 121 aa13.9□□□□□ -0.18
SSBP4-204ENST00000597724 MRI1Q9BV20 369 aa13.9□□□□□ -0.18
SSBP4-204ENST00000597724 DNAJB11Q9UBS4 358 aa13.9□□□□□ -0.18
SSBP4-204ENST00000597724 C22orf46C9J442 243 aa13.89□□□□□ -0.19
SSBP4-204ENST00000597724 AMY2BP19961 511 aa13.89□□□□□ -0.19
SSBP4-204ENST00000597724 GLRA1P23415 457 aa13.89□□□□□ -0.19
SSBP4-204ENST00000597724 DCKP27707 260 aa13.89□□□□□ -0.19
SSBP4-204ENST00000597724 HAAOP46952 286 aa13.89□□□□□ -0.19
SSBP4-204ENST00000597724 TGM4P49221 684 aa13.89□□□□□ -0.19
SSBP4-204ENST00000597724 MRPL28Q13084 256 aaKnown RBP13.89□□□□□ -0.19
SSBP4-204ENST00000597724 SCGB2A2Q13296 93 aa13.89□□□□□ -0.19
SSBP4-204ENST00000597724 MDFIQ99750 246 aa13.89□□□□□ -0.19
SSBP4-204ENST00000597724 NUDT16L1Q9BRJ7 211 aaKnown RBP13.89□□□□□ -0.19
SSBP4-204ENST00000597724 CHST5Q9GZS9 411 aa13.89□□□□□ -0.19
SSBP4-204ENST00000597724 DNTTIP1Q9H147 329 aa13.89□□□□□ -0.19
SSBP4-204ENST00000597724 VCXQ9H320 206 aa13.89□□□□□ -0.19
SSBP4-204ENST00000597724 SNTG1Q9NSN8 517 aa13.89□□□□□ -0.19
SSBP4-204ENST00000597724 SLC7A11Q9UPY5 501 aa13.89□□□□□ -0.19
SSBP4-204ENST00000597724 A0A1B0GW55 424 aa13.88□□□□□ -0.19
SSBP4-204ENST00000597724 IRGMA1A4Y4 181 aa13.88□□□□□ -0.19
SSBP4-204ENST00000597724 E9PI62 339 aa13.88□□□□□ -0.19
SSBP4-204ENST00000597724 J3QT63 122 aa13.88□□□□□ -0.19
SSBP4-204ENST00000597724 SYNGR1O43759 233 aa13.88□□□□□ -0.19
SSBP4-204ENST00000597724 NOS1APO75052 506 aaPredicted RBP13.88□□□□□ -0.19
SSBP4-204ENST00000597724 SERPINA3P01011 423 aa13.88□□□□□ -0.19
SSBP4-204ENST00000597724 DUX4L2P0CJ85 424 aa13.88□□□□□ -0.19
SSBP4-204ENST00000597724 DUX4L3P0CJ86 424 aa13.88□□□□□ -0.19
SSBP4-204ENST00000597724 DUX4L4P0CJ87 422 aa13.88□□□□□ -0.19
SSBP4-204ENST00000597724 DUX4L5P0CJ88 424 aa13.88□□□□□ -0.19
SSBP4-204ENST00000597724 DUX4L6P0CJ89 424 aa13.88□□□□□ -0.19
SSBP4-204ENST00000597724 DUX4L7P0CJ90 424 aa13.88□□□□□ -0.19
SSBP4-204ENST00000597724 PPIAL4GP0DN37 164 aa13.88□□□□□ -0.19
SSBP4-204ENST00000597724 EPHA1P21709 976 aa13.88□□□□□ -0.19
SSBP4-204ENST00000597724 ETV1P50549 477 aa13.88□□□□□ -0.19
SSBP4-204ENST00000597724 C11orf91Q3C1V1 193 aa13.88□□□□□ -0.19
SSBP4-204ENST00000597724 DUX4L9Q6RFH8 374 aaPredicted RBP13.88□□□□□ -0.19
SSBP4-204ENST00000597724 SLC36A1Q7Z2H8 476 aa13.88□□□□□ -0.19
SSBP4-204ENST00000597724 C8orf59Q8N0T1 100 aaPredicted RBP13.88□□□□□ -0.19
SSBP4-204ENST00000597724 POC1AQ8NBT0 407 aa13.88□□□□□ -0.19
SSBP4-204ENST00000597724 OR10AC1Q8NH08 325 aa13.88□□□□□ -0.19
SSBP4-204ENST00000597724 ANGPTL6Q8NI99 470 aa13.88□□□□□ -0.19
SSBP4-204ENST00000597724 NRG4Q8WWG1 115 aa13.88□□□□□ -0.19
SSBP4-204ENST00000597724 PP6455Q8WZ26 134 aa13.88□□□□□ -0.19
SSBP4-204ENST00000597724 TFAP2CQ92754 450 aa13.88□□□□□ -0.19
SSBP4-204ENST00000597724 FGGYQ96C11 551 aa13.88□□□□□ -0.19
SSBP4-204ENST00000597724 ADAT3Q96EY9 351 aaPredicted RBP13.88□□□□□ -0.19
SSBP4-204ENST00000597724 RASL12Q9NYN1 266 aa13.88□□□□□ -0.19
SSBP4-204ENST00000597724 NLKQ9UBE8 527 aa13.88□□□□□ -0.19
SSBP4-204ENST00000597724 DUX4Q9UBX2 424 aa13.88□□□□□ -0.19
SSBP4-204ENST00000597724 HHLA2Q9UM44 414 aa13.88□□□□□ -0.19
SSBP4-204ENST00000597724 FAM230AA0A1W2PPH8 454 aa13.87□□□□□ -0.19
SSBP4-204ENST00000597724 OR2AT4A6NND4 320 aa13.87□□□□□ -0.19
SSBP4-204ENST00000597724 ENSAO43768 121 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms