RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 MFGE8Q08431 387 aaPredicted RBP12.51□□□□□ -0.41
TGFB1-202ENST00000597453 WDR38Q5JTN6 314 aa12.51□□□□□ -0.41
TGFB1-202ENST00000597453 ZNF684Q5T5D7 378 aa12.51□□□□□ -0.41
TGFB1-202ENST00000597453 METTL11BQ5VVY1 283 aa12.51□□□□□ -0.41
TGFB1-202ENST00000597453 WDR82Q6UXN9 313 aa12.51□□□□□ -0.41
TGFB1-202ENST00000597453 OR1M1Q8NGA1 313 aa12.51□□□□□ -0.41
TGFB1-202ENST00000597453 GATAD2BQ8WXI9 593 aa12.51□□□□□ -0.41
TGFB1-202ENST00000597453 ST8SIA4Q92187 359 aa12.51□□□□□ -0.41
TGFB1-202ENST00000597453 LHX4Q969G2 390 aa12.51□□□□□ -0.41
TGFB1-202ENST00000597453 ITFG2Q969R8 447 aa12.51□□□□□ -0.41
TGFB1-202ENST00000597453 Q96MT0 163 aa12.51□□□□□ -0.41
TGFB1-202ENST00000597453 CCL13Q99616 98 aa12.51□□□□□ -0.41
TGFB1-202ENST00000597453 PBOV1Q9GZY1 135 aa12.51□□□□□ -0.41
TGFB1-202ENST00000597453 NUFIP1Q9UHK0 495 aaKnown RBP12.51□□□□□ -0.41
TGFB1-202ENST00000597453 RHBDD3Q9Y3P4 386 aa12.51□□□□□ -0.41
TGFB1-202ENST00000597453 MMP24Q9Y5R2 645 aa12.51□□□□□ -0.41
TGFB1-202ENST00000597453 R4GMQ9 66 aa12.51□□□□□ -0.41
TGFB1-202ENST00000597453 IGHV1-69DA0A0B4J2H0 117 aa12.5□□□□□ -0.41
TGFB1-202ENST00000597453 VGLL3A8MV65 326 aa12.5□□□□□ -0.41
TGFB1-202ENST00000597453 LOC110117498-PIK3R3F6TDL0 507 aa12.5□□□□□ -0.41
TGFB1-202ENST00000597453 SULT1C4O75897 302 aa12.5□□□□□ -0.41
TGFB1-202ENST00000597453 IGLV3-1P01715 115 aa12.5□□□□□ -0.41
TGFB1-202ENST00000597453 IGHV1-69P01742 117 aa12.5□□□□□ -0.41
TGFB1-202ENST00000597453 KRT8P05787 483 aa12.5□□□□□ -0.41
TGFB1-202ENST00000597453 DBTP11182 482 aaKnown RBP12.5□□□□□ -0.41
TGFB1-202ENST00000597453 RAG2P55895 527 aa12.5□□□□□ -0.41
TGFB1-202ENST00000597453 ZNF85Q03923 595 aa12.5□□□□□ -0.41
TGFB1-202ENST00000597453 ZNF91Q05481 1191 aa12.5□□□□□ -0.41
TGFB1-202ENST00000597453 PDCD1Q15116 288 aa12.5□□□□□ -0.41
TGFB1-202ENST00000597453 ZNF691Q5VV52 312 aa12.5□□□□□ -0.41
TGFB1-202ENST00000597453 TTC23Q5W5X9 447 aa12.5□□□□□ -0.41
TGFB1-202ENST00000597453 TREML4Q6UXN2 200 aa12.5□□□□□ -0.41
TGFB1-202ENST00000597453 PDZD9Q8IXQ8 264 aa12.5□□□□□ -0.41
TGFB1-202ENST00000597453 FTMTQ8N4E7 242 aa12.5□□□□□ -0.41
TGFB1-202ENST00000597453 TMEM86BQ8N661 226 aa12.5□□□□□ -0.41
TGFB1-202ENST00000597453 KIR3DL3Q8N743 410 aa12.5□□□□□ -0.41
TGFB1-202ENST00000597453 FAM216BQ8N7L0 139 aa12.5□□□□□ -0.41
TGFB1-202ENST00000597453 CSNK2A3Q8NEV1 391 aa12.5□□□□□ -0.41
TGFB1-202ENST00000597453 APH1BQ8WW43 257 aa12.5□□□□□ -0.41
TGFB1-202ENST00000597453 LYZL4Q96KX0 146 aa12.5□□□□□ -0.41
TGFB1-202ENST00000597453 VCXQ9H320 206 aa12.5□□□□□ -0.41
TGFB1-202ENST00000597453 ACOXLQ9NUZ1 547 aa12.5□□□□□ -0.41
TGFB1-202ENST00000597453 C1RLQ9NZP8 487 aa12.5□□□□□ -0.41
TGFB1-202ENST00000597453 AASSQ9UDR5 926 aa12.5□□□□□ -0.41
TGFB1-202ENST00000597453 RPUSD1Q9UJJ7 312 aaKnown RBP12.5□□□□□ -0.41
TGFB1-202ENST00000597453 EXOGQ9Y2C4 368 aaKnown RBP12.5□□□□□ -0.41
TGFB1-202ENST00000597453 A0A0U1RQK1 487 aa12.49□□□□□ -0.41
TGFB1-202ENST00000597453 METTL15A6NJ78 407 aa12.49□□□□□ -0.41
TGFB1-202ENST00000597453 CDIPTO14735 213 aa12.49□□□□□ -0.41
TGFB1-202ENST00000597453 MAGEB4O15481 346 aaPredicted RBP12.49□□□□□ -0.41
TGFB1-202ENST00000597453 AMY2BP19961 511 aa12.49□□□□□ -0.41
TGFB1-202ENST00000597453 IL5RAQ01344 420 aa12.49□□□□□ -0.41
TGFB1-202ENST00000597453 BLMHQ13867 455 aa12.49□□□□□ -0.41
TGFB1-202ENST00000597453 MICBQ29980 383 aa12.49□□□□□ -0.41
TGFB1-202ENST00000597453 PIP4P2Q8N4L2 257 aa12.49□□□□□ -0.41
TGFB1-202ENST00000597453 DHRSXQ8N5I4 330 aa12.49□□□□□ -0.41
TGFB1-202ENST00000597453 YIPF7Q8N8F6 280 aa12.49□□□□□ -0.41
TGFB1-202ENST00000597453 CYGBQ8WWM9 190 aa12.49□□□□□ -0.41
TGFB1-202ENST00000597453 WFDC12Q8WWY7 111 aa12.49□□□□□ -0.41
TGFB1-202ENST00000597453 LGALS12Q96DT0 336 aa12.49□□□□□ -0.41
TGFB1-202ENST00000597453 ITPKCQ96DU7 683 aa12.49□□□□□ -0.41
TGFB1-202ENST00000597453 FAM71F1Q96KD3 344 aaPredicted RBP12.49□□□□□ -0.41
TGFB1-202ENST00000597453 PAPOLGQ9BWT3 736 aaKnown RBP12.49□□□□□ -0.41
TGFB1-202ENST00000597453 TLNRD1Q9H1K6 362 aa12.49□□□□□ -0.41
TGFB1-202ENST00000597453 NOTCH1P46531 2555 aa12.48□□□□□ -0.41
TGFB1-202ENST00000597453 ECDO95905 644 aaPredicted RBP12.48□□□□□ -0.41
TGFB1-202ENST00000597453 IGHV4-59P01825 116 aa12.48□□□□□ -0.41
TGFB1-202ENST00000597453 TTRP02766 147 aa12.48□□□□□ -0.41
TGFB1-202ENST00000597453 CRYBA1P05813 215 aa12.48□□□□□ -0.41
TGFB1-202ENST00000597453 ATP6V1B1P15313 513 aa12.48□□□□□ -0.41
TGFB1-202ENST00000597453 MUC1P15941 1255 aaPredicted RBP12.48□□□□□ -0.41
TGFB1-202ENST00000597453 ACKR3P25106 362 aa12.48□□□□□ -0.41
TGFB1-202ENST00000597453 GNALP38405 381 aa12.48□□□□□ -0.41
TGFB1-202ENST00000597453 GMFBP60983 142 aa12.48□□□□□ -0.41
TGFB1-202ENST00000597453 ISL1P61371 349 aa12.48□□□□□ -0.41
TGFB1-202ENST00000597453 ADARB1P78563 741 aaKnown RBP12.48□□□□□ -0.41
TGFB1-202ENST00000597453 PRB3Q04118 309 aaPredicted RBP12.48□□□□□ -0.41
TGFB1-202ENST00000597453 RAB40BQ12829 278 aa12.48□□□□□ -0.41
TGFB1-202ENST00000597453 IL18R1Q13478 541 aa12.48□□□□□ -0.41
TGFB1-202ENST00000597453 CDONQ4KMG0 1287 aa12.48□□□□□ -0.41
TGFB1-202ENST00000597453 BCL2L15Q5TBC7 163 aa12.48□□□□□ -0.41
TGFB1-202ENST00000597453 PLEKHG7Q6ZR37 379 aa12.48□□□□□ -0.41
TGFB1-202ENST00000597453 FAM220AQ7Z4H9 259 aa12.48□□□□□ -0.41
TGFB1-202ENST00000597453 VMO1Q7Z5L0 202 aa12.48□□□□□ -0.41
TGFB1-202ENST00000597453 LY6G5BQ8NDX9 201 aa12.48□□□□□ -0.41
TGFB1-202ENST00000597453 SETD9Q8NE22 299 aa12.48□□□□□ -0.41
TGFB1-202ENST00000597453 OR4F5Q8NH21 305 aa12.48□□□□□ -0.41
TGFB1-202ENST00000597453 SSMEM1Q8WWF3 244 aa12.48□□□□□ -0.41
TGFB1-202ENST00000597453 ADI1Q9BV57 179 aa12.48□□□□□ -0.41
TGFB1-202ENST00000597453 FGF23Q9GZV9 251 aaPredicted RBP12.48□□□□□ -0.41
TGFB1-202ENST00000597453 CNTD2Q9H8S5 307 aa12.48□□□□□ -0.41
TGFB1-202ENST00000597453 BEX1Q9HBH7 125 aa12.48□□□□□ -0.41
TGFB1-202ENST00000597453 ABCB9Q9NP78 766 aa12.48□□□□□ -0.41
TGFB1-202ENST00000597453 MRPS18AQ9NVS2 196 aaKnown RBP12.48□□□□□ -0.41
TGFB1-202ENST00000597453 RPL36Q9Y3U8 105 aaKnown RBP12.48□□□□□ -0.41
TGFB1-202ENST00000597453 SNX5Q9Y5X3 404 aa12.48□□□□□ -0.41
TGFB1-202ENST00000597453 POMT1Q9Y6A1 747 aa12.48□□□□□ -0.41
TGFB1-202ENST00000597453 VWFP04275 2813 aa12.48□□□□□ -0.41
TGFB1-202ENST00000597453 DAPL1A0PJW8 107 aa12.47□□□□□ -0.41
TGFB1-202ENST00000597453 ZNF850A8MQ14 1090 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms