RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 CYSLTR2Q9NS75 346 aa12.56□□□□□ -0.4
SHKBP1-211ENST00000595945 ADAM30Q9UKF2 790 aa12.56□□□□□ -0.4
SHKBP1-211ENST00000595945 RAI1Q7Z5J4 1906 aaPredicted RBP12.56□□□□□ -0.4
SHKBP1-211ENST00000595945 USP9YO00507 2555 aaPredicted RBP12.56□□□□□ -0.4
SHKBP1-211ENST00000595945 ZNF732B4DXR9 585 aa12.55□□□□□ -0.4
SHKBP1-211ENST00000595945 ARSBP15848 533 aa12.55□□□□□ -0.4
SHKBP1-211ENST00000595945 RAB6AP20340 208 aa12.55□□□□□ -0.4
SHKBP1-211ENST00000595945 GPM6AP51674 278 aa12.55□□□□□ -0.4
SHKBP1-211ENST00000595945 GNG3P63215 75 aa12.55□□□□□ -0.4
SHKBP1-211ENST00000595945 PDZK1IP1Q13113 114 aa12.55□□□□□ -0.4
SHKBP1-211ENST00000595945 AWAT2Q6E213 333 aa12.55□□□□□ -0.4
SHKBP1-211ENST00000595945 OR2W3Q7Z3T1 314 aa12.55□□□□□ -0.4
SHKBP1-211ENST00000595945 WDR86Q86TI4 376 aa12.55□□□□□ -0.4
SHKBP1-211ENST00000595945 BIVMQ86UB2 503 aa12.55□□□□□ -0.4
SHKBP1-211ENST00000595945 LRRC28Q86X40 367 aaPredicted RBP12.55□□□□□ -0.4
SHKBP1-211ENST00000595945 CALHM1Q8IU99 346 aa12.55□□□□□ -0.4
SHKBP1-211ENST00000595945 CMTM4Q8IZR5 234 aa12.55□□□□□ -0.4
SHKBP1-211ENST00000595945 PXT1Q8NFP0 134 aa12.55□□□□□ -0.4
SHKBP1-211ENST00000595945 OR5D18Q8NGL1 313 aa12.55□□□□□ -0.4
SHKBP1-211ENST00000595945 OR13G1Q8NGZ3 307 aa12.55□□□□□ -0.4
SHKBP1-211ENST00000595945 TNFAIP8L1Q8WVP5 186 aa12.55□□□□□ -0.4
SHKBP1-211ENST00000595945 NEUROG1Q92886 237 aa12.55□□□□□ -0.4
SHKBP1-211ENST00000595945 MICU1Q9BPX6 476 aa12.55□□□□□ -0.4
SHKBP1-211ENST00000595945 RTL8AQ9BWD3 113 aa12.55□□□□□ -0.4
SHKBP1-211ENST00000595945 OR51I2Q9H344 312 aa12.55□□□□□ -0.4
SHKBP1-211ENST00000595945 GHRLQ9UBU3 117 aa12.55□□□□□ -0.4
SHKBP1-211ENST00000595945 DUSP13Q9UII6 198 aa12.55□□□□□ -0.4
SHKBP1-211ENST00000595945 KLF2Q9Y5W3 355 aaPredicted RBP12.55□□□□□ -0.4
SHKBP1-211ENST00000595945 V9GYH0 126 aa12.55□□□□□ -0.4
SHKBP1-211ENST00000595945 CLEC18AA5D8T8 446 aa12.54□□□□□ -0.4
SHKBP1-211ENST00000595945 ZSCAN5BA6NJL1 495 aa12.54□□□□□ -0.4
SHKBP1-211ENST00000595945 CLDN25C9JDP6 229 aa12.54□□□□□ -0.4
SHKBP1-211ENST00000595945 PLAUP00749 431 aa12.54□□□□□ -0.4
SHKBP1-211ENST00000595945 MPZP25189 248 aa12.54□□□□□ -0.4
SHKBP1-211ENST00000595945 EFNB2P52799 333 aa12.54□□□□□ -0.4
SHKBP1-211ENST00000595945 SELENOVP59797 346 aa12.54□□□□□ -0.4
SHKBP1-211ENST00000595945 UNC119Q13432 240 aa12.54□□□□□ -0.4
SHKBP1-211ENST00000595945 DAZAP2Q15038 168 aaPredicted RBP12.54□□□□□ -0.4
SHKBP1-211ENST00000595945 OR8G1Q15617 311 aa12.54□□□□□ -0.4
SHKBP1-211ENST00000595945 CNIH2Q6PI25 160 aa12.54□□□□□ -0.4
SHKBP1-211ENST00000595945 CLEC18BQ6UXF7 455 aa12.54□□□□□ -0.4
SHKBP1-211ENST00000595945 SAXO1Q8IYX7 474 aa12.54□□□□□ -0.4
SHKBP1-211ENST00000595945 SPERTQ8NA61 448 aa12.54□□□□□ -0.4
SHKBP1-211ENST00000595945 ZSCAN4Q8NAM6 433 aaPredicted RBP12.54□□□□□ -0.4
SHKBP1-211ENST00000595945 CLEC18CQ8NCF0 446 aa12.54□□□□□ -0.4
SHKBP1-211ENST00000595945 RAB40AQ8WXH6 277 aa12.54□□□□□ -0.4
SHKBP1-211ENST00000595945 GTF3AQ92664 365 aaKnown RBP12.54□□□□□ -0.4
SHKBP1-211ENST00000595945 PIK3IP1Q96FE7 263 aa12.54□□□□□ -0.4
SHKBP1-211ENST00000595945 DIRAS2Q96HU8 199 aa12.54□□□□□ -0.4
SHKBP1-211ENST00000595945 CEP19Q96LK0 163 aa12.54□□□□□ -0.4
SHKBP1-211ENST00000595945 CXXC4Q9H2H0 198 aa12.54□□□□□ -0.4
SHKBP1-211ENST00000595945 RHBDL2Q9NX52 303 aa12.54□□□□□ -0.4
SHKBP1-211ENST00000595945 IL36GQ9NZH8 169 aa12.54□□□□□ -0.4
SHKBP1-211ENST00000595945 TAAR3PQ9P1P4 343 aa12.54□□□□□ -0.4
SHKBP1-211ENST00000595945 POU2F3Q9UKI9 436 aa12.54□□□□□ -0.4
SHKBP1-211ENST00000595945 IGKV1-12A0A0C4DH73 117 aa12.53□□□□□ -0.4
SHKBP1-211ENST00000595945 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.53□□□□□ -0.4
SHKBP1-211ENST00000595945 LRP5LA4QPB2 252 aa12.53□□□□□ -0.4
SHKBP1-211ENST00000595945 TMEM210A6NLX4 147 aa12.53□□□□□ -0.4
SHKBP1-211ENST00000595945 SPRY1O43609 319 aaPredicted RBP12.53□□□□□ -0.4
SHKBP1-211ENST00000595945 IGKV1D-12P01611 117 aa12.53□□□□□ -0.4
SHKBP1-211ENST00000595945 ADH4P08319 380 aa12.53□□□□□ -0.4
SHKBP1-211ENST00000595945 OR4A8P0C604 315 aa12.53□□□□□ -0.4
SHKBP1-211ENST00000595945 TMEM225BP0DP42 221 aa12.53□□□□□ -0.4
SHKBP1-211ENST00000595945 PTBP1P26599 531 aaKnown RBP eCLIP12.53□□□□□ -0.4
SHKBP1-211ENST00000595945 CD200P41217 278 aa12.53□□□□□ -0.4
SHKBP1-211ENST00000595945 ART1P52961 327 aa12.53□□□□□ -0.4
SHKBP1-211ENST00000595945 ZNF45Q02386 682 aa12.53□□□□□ -0.4
SHKBP1-211ENST00000595945 ZNF846Q147U1 533 aa12.53□□□□□ -0.4
SHKBP1-211ENST00000595945 EFNB3Q15768 340 aa12.53□□□□□ -0.4
SHKBP1-211ENST00000595945 ZNF672Q499Z4 452 aaPredicted RBP12.53□□□□□ -0.4
SHKBP1-211ENST00000595945 OR10K2Q6IF99 312 aa12.53□□□□□ -0.4
SHKBP1-211ENST00000595945 METAP1DQ6UB28 335 aaPredicted RBP12.53□□□□□ -0.4
SHKBP1-211ENST00000595945 TMEM200AQ86VY9 491 aa12.53□□□□□ -0.4
SHKBP1-211ENST00000595945 ZNF573Q86YE8 665 aa12.53□□□□□ -0.4
SHKBP1-211ENST00000595945 Q8NFD4 153 aa12.53□□□□□ -0.4
SHKBP1-211ENST00000595945 OR4M1Q8NGD0 313 aa12.53□□□□□ -0.4
SHKBP1-211ENST00000595945 OR8S1Q8NH09 359 aa12.53□□□□□ -0.4
SHKBP1-211ENST00000595945 DHRS9Q9BPW9 319 aa12.53□□□□□ -0.4
SHKBP1-211ENST00000595945 PKIBQ9C010 78 aa12.53□□□□□ -0.4
SHKBP1-211ENST00000595945 WDR12Q9GZL7 423 aaKnown RBP12.53□□□□□ -0.4
SHKBP1-211ENST00000595945 TLNRD1Q9H1K6 362 aa12.53□□□□□ -0.4
SHKBP1-211ENST00000595945 PLK3Q9H4B4 646 aa12.53□□□□□ -0.4
SHKBP1-211ENST00000595945 MSL2Q9HCI7 577 aa12.53□□□□□ -0.4
SHKBP1-211ENST00000595945 HMG20AQ9NP66 347 aa12.53□□□□□ -0.4
SHKBP1-211ENST00000595945 EXTL2Q9UBQ6 330 aa12.53□□□□□ -0.4
SHKBP1-211ENST00000595945 RAB22AQ9UL26 194 aa12.53□□□□□ -0.4
SHKBP1-211ENST00000595945 ING4Q9UNL4 249 aa12.53□□□□□ -0.4
SHKBP1-211ENST00000595945 AKAP6Q13023 2319 aa12.53□□□□□ -0.4
SHKBP1-211ENST00000595945 TANC2Q9HCD6 1990 aa12.52□□□□□ -0.4
SHKBP1-211ENST00000595945 DYSFO75923 2080 aa12.52□□□□□ -0.4
SHKBP1-211ENST00000595945 VSTM5A8MXK1 200 aa12.52□□□□□ -0.41
SHKBP1-211ENST00000595945 FAM25AB3EWG3 89 aa12.52□□□□□ -0.41
SHKBP1-211ENST00000595945 FAM25CB3EWG5 89 aa12.52□□□□□ -0.41
SHKBP1-211ENST00000595945 FAM25GB3EWG6 89 aa12.52□□□□□ -0.41
SHKBP1-211ENST00000595945 J3QT63 122 aa12.52□□□□□ -0.41
SHKBP1-211ENST00000595945 ANGPTL7O43827 346 aa12.52□□□□□ -0.41
SHKBP1-211ENST00000595945 PTBP3O95758 552 aaKnown RBP12.52□□□□□ -0.41
SHKBP1-211ENST00000595945 APOBEC3AP31941 199 aaPredicted RBP12.52□□□□□ -0.41
SHKBP1-211ENST00000595945 SERPINF1P36955 418 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms