RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 MS4A18Q3C1V0 323 aa13.56□□□□□ -0.24
PNKP-204ENST00000594661 HES3Q5TGS1 186 aa13.56□□□□□ -0.24
PNKP-204ENST00000594661 ZNF468Q5VIY5 522 aaPredicted RBP13.56□□□□□ -0.24
PNKP-204ENST00000594661 AWAT2Q6E213 333 aa13.56□□□□□ -0.24
PNKP-204ENST00000594661 STEAP1BQ6NZ63 245 aa13.56□□□□□ -0.24
PNKP-204ENST00000594661 LRRC69Q6ZNQ3 347 aa13.56□□□□□ -0.24
PNKP-204ENST00000594661 DND1Q8IYX4 353 aaKnown RBP13.56□□□□□ -0.24
PNKP-204ENST00000594661 ZNF775Q96BV0 537 aaPredicted RBP13.56□□□□□ -0.24
PNKP-204ENST00000594661 PROK2Q9HC23 129 aa13.56□□□□□ -0.24
PNKP-204ENST00000594661 A0A0B4J2A0 478 aa13.55□□□□□ -0.24
PNKP-204ENST00000594661 G3V3Y1 287 aa13.55□□□□□ -0.24
PNKP-204ENST00000594661 IGHMP01871 453 aa13.55□□□□□ -0.24
PNKP-204ENST00000594661 OPN1LWP04000 364 aa13.55□□□□□ -0.24
PNKP-204ENST00000594661 CD3DP04234 171 aa13.55□□□□□ -0.24
PNKP-204ENST00000594661 SNRPCP09234 159 aaKnown RBP13.55□□□□□ -0.24
PNKP-204ENST00000594661 DAOP14920 347 aa13.55□□□□□ -0.24
PNKP-204ENST00000594661 SCAND1P57086 179 aa13.55□□□□□ -0.24
PNKP-204ENST00000594661 EIF5AP63241 154 aaKnown RBP13.55□□□□□ -0.24
PNKP-204ENST00000594661 KHDC3LQ587J8 217 aa13.55□□□□□ -0.24
PNKP-204ENST00000594661 TMEM156Q8N614 296 aa13.55□□□□□ -0.24
PNKP-204ENST00000594661 OR1J1Q8NGS3 322 aa13.55□□□□□ -0.24
PNKP-204ENST00000594661 OTOSQ8NHW6 89 aa13.55□□□□□ -0.24
PNKP-204ENST00000594661 SECTM1Q8WVN6 248 aa13.55□□□□□ -0.24
PNKP-204ENST00000594661 FOXRED1Q96CU9 486 aaPredicted RBP13.55□□□□□ -0.24
PNKP-204ENST00000594661 POM121Q96HA1 1249 aa13.55□□□□□ -0.24
PNKP-204ENST00000594661 AMELYQ99218 206 aa13.55□□□□□ -0.24
PNKP-204ENST00000594661 POTEKPQ9BYX7 375 aa13.55□□□□□ -0.24
PNKP-204ENST00000594661 RGCCQ9H4X1 137 aa13.55□□□□□ -0.24
PNKP-204ENST00000594661 SH2D2AQ9NP31 389 aa13.55□□□□□ -0.24
PNKP-204ENST00000594661 PARD6AQ9NPB6 346 aa13.55□□□□□ -0.24
PNKP-204ENST00000594661 SHPKQ9UHJ6 478 aa13.55□□□□□ -0.24
PNKP-204ENST00000594661 NOP16Q9Y3C1 178 aaKnown RBP13.55□□□□□ -0.24
PNKP-204ENST00000594661 CACNA1CQ13936 2221 aa13.55□□□□□ -0.24
PNKP-204ENST00000594661 LIPT2A6NK58 231 aa13.55□□□□□ -0.24
PNKP-204ENST00000594661 ARG1P05089 322 aa13.55□□□□□ -0.24
PNKP-204ENST00000594661 CRHP06850 196 aa13.55□□□□□ -0.24
PNKP-204ENST00000594661 SOX2P48431 317 aa13.55□□□□□ -0.24
PNKP-204ENST00000594661 Q499Y3 187 aa13.55□□□□□ -0.24
PNKP-204ENST00000594661 HIST2H3PS2Q5TEC6 136 aa13.55□□□□□ -0.24
PNKP-204ENST00000594661 SLC35D2Q76EJ3 337 aa13.55□□□□□ -0.24
PNKP-204ENST00000594661 WDFY1Q8IWB7 410 aa13.55□□□□□ -0.24
PNKP-204ENST00000594661 ZNF248Q8NDW4 579 aa13.55□□□□□ -0.24
PNKP-204ENST00000594661 ASB17Q8WXJ9 295 aa13.55□□□□□ -0.24
PNKP-204ENST00000594661 MAFIPQ8WZ33 124 aa13.55□□□□□ -0.24
PNKP-204ENST00000594661 ZBTB8AQ96BR9 441 aa13.55□□□□□ -0.24
PNKP-204ENST00000594661 PARP11Q9NR21 331 aa13.55□□□□□ -0.24
PNKP-204ENST00000594661 STEAP1Q9UHE8 339 aa13.55□□□□□ -0.24
PNKP-204ENST00000594661 HDGFL3Q9Y3E1 203 aa13.55□□□□□ -0.24
PNKP-204ENST00000594661 OR5H15A6NDH6 313 aa13.54□□□□□ -0.24
PNKP-204ENST00000594661 OR5H1A6NKK0 313 aa13.54□□□□□ -0.24
PNKP-204ENST00000594661 ZNF724A8MTY0 619 aa13.54□□□□□ -0.24
PNKP-204ENST00000594661 EREGO14944 169 aa13.54□□□□□ -0.24
PNKP-204ENST00000594661 CTLA4P16410 223 aa13.54□□□□□ -0.24
PNKP-204ENST00000594661 MYBPHQ13203 477 aa13.54□□□□□ -0.24
PNKP-204ENST00000594661 H1FNTQ75WM6 255 aaPredicted RBP13.54□□□□□ -0.24
PNKP-204ENST00000594661 TMED4Q7Z7H5 227 aa13.54□□□□□ -0.24
PNKP-204ENST00000594661 BPIFB2Q8N4F0 458 aa13.54□□□□□ -0.24
PNKP-204ENST00000594661 ZNF676Q8N7Q3 588 aa13.54□□□□□ -0.24
PNKP-204ENST00000594661 LYPD6BQ8NI32 183 aa13.54□□□□□ -0.24
PNKP-204ENST00000594661 ANGPTL4Q9BY76 406 aa13.54□□□□□ -0.24
PNKP-204ENST00000594661 COMMD4Q9H0A8 199 aa13.54□□□□□ -0.24
PNKP-204ENST00000594661 CHST11Q9NPF2 352 aa13.54□□□□□ -0.24
PNKP-204ENST00000594661 P4HTMQ9NXG6 502 aa13.54□□□□□ -0.24
PNKP-204ENST00000594661 IGLV1-36A0A0B4J1U3 117 aa13.54□□□□□ -0.24
PNKP-204ENST00000594661 A0A1W2PPE2 198 aa13.54□□□□□ -0.24
PNKP-204ENST00000594661 ZNF587BE7ETH6 402 aa13.54□□□□□ -0.24
PNKP-204ENST00000594661 M0R036 132 aa13.54□□□□□ -0.24
PNKP-204ENST00000594661 SPARCP09486 303 aa13.54□□□□□ -0.24
PNKP-204ENST00000594661 PSMB6P28072 239 aa13.54□□□□□ -0.24
PNKP-204ENST00000594661 TLE3Q04726 772 aa13.54□□□□□ -0.24
PNKP-204ENST00000594661 ZP4Q12836 540 aa13.54□□□□□ -0.24
PNKP-204ENST00000594661 GAGE1Q13065 139 aa13.54□□□□□ -0.24
PNKP-204ENST00000594661 CLN3Q13286 438 aa13.54□□□□□ -0.24
PNKP-204ENST00000594661 ODF4Q2M2E3 257 aa13.54□□□□□ -0.24
PNKP-204ENST00000594661 MDGA2Q7Z553 956 aa13.54□□□□□ -0.24
PNKP-204ENST00000594661 GABRG1Q8N1C3 465 aa13.54□□□□□ -0.24
PNKP-204ENST00000594661 ZNF610Q8N9Z0 462 aa13.54□□□□□ -0.24
PNKP-204ENST00000594661 ACBD4Q8NC06 268 aa13.54□□□□□ -0.24
PNKP-204ENST00000594661 OR10AD1Q8NGE0 317 aa13.54□□□□□ -0.24
PNKP-204ENST00000594661 NTNG2Q96CW9 530 aa13.54□□□□□ -0.24
PNKP-204ENST00000594661 ELOVL3Q9HB03 270 aa13.54□□□□□ -0.24
PNKP-204ENST00000594661 MRPL22Q9NWU5 206 aaKnown RBP13.54□□□□□ -0.24
PNKP-204ENST00000594661 ALKBH4Q9NXW9 302 aa13.54□□□□□ -0.24
PNKP-204ENST00000594661 TMEM212A6NML5 194 aa13.53□□□□□ -0.24
PNKP-204ENST00000594661 OR4C45A6NMZ5 311 aa13.53□□□□□ -0.24
PNKP-204ENST00000594661 H3BSH0 61 aa13.53□□□□□ -0.24
PNKP-204ENST00000594661 PPP1R2P9O14990 202 aa13.53□□□□□ -0.24
PNKP-204ENST00000594661 LINC00614P0C842 121 aa13.53□□□□□ -0.24
PNKP-204ENST00000594661 CSRP1P21291 193 aaKnown RBP13.53□□□□□ -0.24
PNKP-204ENST00000594661 ZBTB25P24278 435 aa13.53□□□□□ -0.24
PNKP-204ENST00000594661 GUCA2AQ02747 115 aa13.53□□□□□ -0.24
PNKP-204ENST00000594661 EIF3IQ13347 325 aaKnown RBP13.53□□□□□ -0.24
PNKP-204ENST00000594661 TRIP6Q15654 476 aaKnown RBP13.53□□□□□ -0.24
PNKP-204ENST00000594661 MEP1BQ16820 701 aa13.53□□□□□ -0.24
PNKP-204ENST00000594661 TMEM164Q5U3C3 297 aa13.53□□□□□ -0.24
PNKP-204ENST00000594661 OR2A2Q6IF42 318 aa13.53□□□□□ -0.24
PNKP-204ENST00000594661 STAC2Q6ZMT1 411 aa13.53□□□□□ -0.24
PNKP-204ENST00000594661 DCUN1D4Q92564 292 aa13.53□□□□□ -0.24
PNKP-204ENST00000594661 GNRHR2Q96P88 292 aa13.53□□□□□ -0.24
PNKP-204ENST00000594661 SERINC1Q9NRX5 453 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms