RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 WBP1Q96G27 269 aa11.41□□□□□ -0.58
VRK3-205ENST00000593919 SLA2Q9H6Q3 261 aa11.41□□□□□ -0.58
VRK3-205ENST00000593919 MTFP1Q9UDX5 166 aa11.41□□□□□ -0.58
VRK3-205ENST00000593919 OSGIN2Q9Y236 505 aa11.41□□□□□ -0.58
VRK3-205ENST00000593919 DHRS7CA6NNS2 312 aa11.4□□□□□ -0.58
VRK3-205ENST00000593919 AKR7A2O43488 359 aa11.4□□□□□ -0.58
VRK3-205ENST00000593919 ANXA3P12429 323 aa11.4□□□□□ -0.58
VRK3-205ENST00000593919 RAB3AP20336 220 aa11.4□□□□□ -0.58
VRK3-205ENST00000593919 SNRPD2P62316 118 aaKnown RBP11.4□□□□□ -0.58
VRK3-205ENST00000593919 MRPL49Q13405 166 aaKnown RBP11.4□□□□□ -0.58
VRK3-205ENST00000593919 NDUFA5Q16718 116 aa11.4□□□□□ -0.58
VRK3-205ENST00000593919 TIMM23BQ5SRD1 257 aa11.4□□□□□ -0.58
VRK3-205ENST00000593919 OR10K2Q6IF99 312 aa11.4□□□□□ -0.58
VRK3-205ENST00000593919 RFPL4BQ6ZWI9 263 aa11.4□□□□□ -0.58
VRK3-205ENST00000593919 CCDC54Q8NEL0 328 aa11.4□□□□□ -0.58
VRK3-205ENST00000593919 SEMA6DQ8NFY4 1073 aa11.4□□□□□ -0.58
VRK3-205ENST00000593919 C10orf35Q96D05 121 aa11.4□□□□□ -0.58
VRK3-205ENST00000593919 CNTNAP3BQ96NU0 1288 aa11.4□□□□□ -0.58
VRK3-205ENST00000593919 CNTNAP3Q9BZ76 1288 aa11.4□□□□□ -0.58
VRK3-205ENST00000593919 OR51B6Q9H340 312 aa11.4□□□□□ -0.58
VRK3-205ENST00000593919 TMEM138Q9NPI0 162 aa11.4□□□□□ -0.58
VRK3-205ENST00000593919 JKAMPQ9P055 326 aa11.4□□□□□ -0.58
VRK3-205ENST00000593919 ZNF69Q9UC07 566 aa11.4□□□□□ -0.58
VRK3-205ENST00000593919 AMDHD2Q9Y303 409 aa11.4□□□□□ -0.58
VRK3-205ENST00000593919 STARD10Q9Y365 291 aa11.4□□□□□ -0.58
VRK3-205ENST00000593919 SLC25A15Q9Y619 301 aa11.4□□□□□ -0.58
VRK3-205ENST00000593919 PLCE1Q9P212 2302 aa11.4□□□□□ -0.58
VRK3-205ENST00000593919 BDKRB2P30411 391 aa11.39□□□□□ -0.59
VRK3-205ENST00000593919 CCKARP32238 428 aa11.39□□□□□ -0.59
VRK3-205ENST00000593919 PRSS3P35030 304 aa11.39□□□□□ -0.59
VRK3-205ENST00000593919 THBS4P35443 961 aa11.39□□□□□ -0.59
VRK3-205ENST00000593919 RAD52P43351 418 aa11.39□□□□□ -0.59
VRK3-205ENST00000593919 GSK3AP49840 483 aa11.39□□□□□ -0.59
VRK3-205ENST00000593919 GK2Q14410 553 aaPredicted RBP11.39□□□□□ -0.59
VRK3-205ENST00000593919 OR8B8Q15620 311 aa11.39□□□□□ -0.59
VRK3-205ENST00000593919 DMRTC1Q5HYR2 192 aa11.39□□□□□ -0.59
VRK3-205ENST00000593919 THOC7Q6I9Y2 204 aaKnown RBP11.39□□□□□ -0.59
VRK3-205ENST00000593919 PGAP1Q75T13 922 aa11.39□□□□□ -0.59
VRK3-205ENST00000593919 NKAIN3Q8N8D7 197 aa11.39□□□□□ -0.59
VRK3-205ENST00000593919 OR52N4Q8NGI2 321 aa11.39□□□□□ -0.59
VRK3-205ENST00000593919 OR4D6Q8NGJ1 314 aa11.39□□□□□ -0.59
VRK3-205ENST00000593919 OR4C16Q8NGL9 310 aa11.39□□□□□ -0.59
VRK3-205ENST00000593919 SEC22CQ9BRL7 303 aa11.39□□□□□ -0.59
VRK3-205ENST00000593919 CHST5Q9GZS9 411 aa11.39□□□□□ -0.59
VRK3-205ENST00000593919 SPTBN1Q01082 2364 aaKnown RBP11.39□□□□□ -0.59
VRK3-205ENST00000593919 IGKV1-9A0A0C4DH69 117 aa11.39□□□□□ -0.59
VRK3-205ENST00000593919 IGLV1-44P01699 117 aa11.39□□□□□ -0.59
VRK3-205ENST00000593919 CSF1P09603 554 aa11.39□□□□□ -0.59
VRK3-205ENST00000593919 CECR9P0C854 216 aa11.39□□□□□ -0.59
VRK3-205ENST00000593919 SULT1A3P0DMM9 295 aa11.39□□□□□ -0.59
VRK3-205ENST00000593919 SULT1A4P0DMN0 295 aa11.39□□□□□ -0.59
VRK3-205ENST00000593919 GTF2F2P13984 249 aa11.39□□□□□ -0.59
VRK3-205ENST00000593919 S100A1P23297 94 aa11.39□□□□□ -0.59
VRK3-205ENST00000593919 FAUP35544 74 aaKnown RBP11.39□□□□□ -0.59
VRK3-205ENST00000593919 RIPPLY1Q0D2K3 151 aa11.39□□□□□ -0.59
VRK3-205ENST00000593919 MALLQ13021 153 aa11.39□□□□□ -0.59
VRK3-205ENST00000593919 HLXQ14774 488 aaPredicted RBP11.39□□□□□ -0.59
VRK3-205ENST00000593919 ZNF782Q6ZMW2 699 aaPredicted RBP11.39□□□□□ -0.59
VRK3-205ENST00000593919 Q6ZTK2 550 aa11.39□□□□□ -0.59
VRK3-205ENST00000593919 OR5AS1Q8N127 324 aa11.39□□□□□ -0.59
VRK3-205ENST00000593919 OR4D10Q8NGI6 311 aa11.39□□□□□ -0.59
VRK3-205ENST00000593919 PP6455Q8WZ26 134 aa11.39□□□□□ -0.59
VRK3-205ENST00000593919 SORCS2Q96PQ0 1159 aa11.39□□□□□ -0.59
VRK3-205ENST00000593919 POFUT1Q9H488 388 aa11.39□□□□□ -0.59
VRK3-205ENST00000593919 CDH20Q9HBT6 801 aa11.39□□□□□ -0.59
VRK3-205ENST00000593919 PTTG3PQ9NZH4 202 aa11.39□□□□□ -0.59
VRK3-205ENST00000593919 ING4Q9UNL4 249 aa11.39□□□□□ -0.59
VRK3-205ENST00000593919 HSPB11Q9Y547 144 aa11.39□□□□□ -0.59
VRK3-205ENST00000593919 CCL21O00585 134 aa11.38□□□□□ -0.59
VRK3-205ENST00000593919 PRAF2O60831 178 aa11.38□□□□□ -0.59
VRK3-205ENST00000593919 NDUFB6O95139 128 aa11.38□□□□□ -0.59
VRK3-205ENST00000593919 CD37P11049 281 aa11.38□□□□□ -0.59
VRK3-205ENST00000593919 ANXA7P20073 488 aaKnown RBP11.38□□□□□ -0.59
VRK3-205ENST00000593919 C1orf100Q5SVJ3 147 aa11.38□□□□□ -0.59
VRK3-205ENST00000593919 METTL11BQ5VVY1 283 aa11.38□□□□□ -0.59
VRK3-205ENST00000593919 LAMTOR1Q6IAA8 161 aa11.38□□□□□ -0.59
VRK3-205ENST00000593919 LYPD6Q86Y78 171 aa11.38□□□□□ -0.59
VRK3-205ENST00000593919 OR8S1Q8NH09 359 aa11.38□□□□□ -0.59
VRK3-205ENST00000593919 DEDD2Q8WXF8 326 aa11.38□□□□□ -0.59
VRK3-205ENST00000593919 HYLS1Q96M11 299 aa11.38□□□□□ -0.59
VRK3-205ENST00000593919 SPACA5Q96QH8 159 aa11.38□□□□□ -0.59
VRK3-205ENST00000593919 CNTD2Q9H8S5 307 aa11.38□□□□□ -0.59
VRK3-205ENST00000593919 TAS2R8Q9NYW2 309 aa11.38□□□□□ -0.59
VRK3-205ENST00000593919 IGHV1-18A0A0C4DH31 117 aa11.37□□□□□ -0.59
VRK3-205ENST00000593919 A0A1B0GUH1 482 aa11.37□□□□□ -0.59
VRK3-205ENST00000593919 TMEM238LA0A1B0GVL6 79 aa11.37□□□□□ -0.59
VRK3-205ENST00000593919 SMPD2O60906 423 aa11.37□□□□□ -0.59
VRK3-205ENST00000593919 ERCC1P07992 297 aaPredicted RBP11.37□□□□□ -0.59
VRK3-205ENST00000593919 UBE2V2Q15819 145 aa11.37□□□□□ -0.59
VRK3-205ENST00000593919 MRPL21Q7Z2W9 205 aaKnown RBP11.37□□□□□ -0.59
VRK3-205ENST00000593919 ACBD4Q8NC06 268 aa11.37□□□□□ -0.59
VRK3-205ENST00000593919 STEAP2Q8NFT2 490 aa11.37□□□□□ -0.59
VRK3-205ENST00000593919 DVL3Q92997 716 aaPredicted RBP11.37□□□□□ -0.59
VRK3-205ENST00000593919 FOXRED1Q96CU9 486 aaPredicted RBP11.37□□□□□ -0.59
VRK3-205ENST00000593919 TRAF4Q9BUZ4 470 aaPredicted RBP11.37□□□□□ -0.59
VRK3-205ENST00000593919 ZMAT3Q9HA38 289 aaKnown RBP11.37□□□□□ -0.59
VRK3-205ENST00000593919 ELOVL5Q9NYP7 299 aa11.37□□□□□ -0.59
VRK3-205ENST00000593919 RHBDD3Q9Y3P4 386 aa11.37□□□□□ -0.59
VRK3-205ENST00000593919 MEIKINA0A087WXM9 373 aa11.37□□□□□ -0.59
VRK3-205ENST00000593919 J3QW42 95 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms