RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 C9orf139Q6ZV77 190 aa22.55■■□□□ 1.2
SMAD4-213ENST00000591914 BCL6BQ8N143 479 aaPredicted RBP22.55■■□□□ 1.2
SMAD4-213ENST00000591914 PRSS35Q8N3Z0 413 aa22.55■■□□□ 1.2
SMAD4-213ENST00000591914 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP22.55■■□□□ 1.2
SMAD4-213ENST00000591914 PNLDC1Q8NA58 520 aaKnown RBP22.55■■□□□ 1.2
SMAD4-213ENST00000591914 OR5T2Q8NGG2 359 aa22.55■■□□□ 1.2
SMAD4-213ENST00000591914 RHOXF1Q8NHV9 184 aa22.55■■□□□ 1.2
SMAD4-213ENST00000591914 ST8SIA4Q92187 359 aa22.55■■□□□ 1.2
SMAD4-213ENST00000591914 ESM1Q9NQ30 184 aa22.55■■□□□ 1.2
SMAD4-213ENST00000591914 GPR173Q9NS66 373 aa22.55■■□□□ 1.2
SMAD4-213ENST00000591914 SNTG1Q9NSN8 517 aa22.55■■□□□ 1.2
SMAD4-213ENST00000591914 FAM118AQ9NWS6 357 aa22.55■■□□□ 1.2
SMAD4-213ENST00000591914 EXOGQ9Y2C4 368 aaKnown RBP22.55■■□□□ 1.2
SMAD4-213ENST00000591914 TRAV40A0A0B4J280 105 aa22.54■■□□□ 1.2
SMAD4-213ENST00000591914 LOC100130705A0A1B0GUX0 176 aa22.54■■□□□ 1.2
SMAD4-213ENST00000591914 A0A1B0GVI7 797 aa22.54■■□□□ 1.2
SMAD4-213ENST00000591914 ZNF879B4DU55 563 aa22.54■■□□□ 1.2
SMAD4-213ENST00000591914 HAGHLQ6PII5 290 aaPredicted RBP22.54■■□□□ 1.2
SMAD4-213ENST00000591914 KCTD20Q7Z5Y7 419 aa22.54■■□□□ 1.2
SMAD4-213ENST00000591914 FGFRL1Q8N441 504 aa22.54■■□□□ 1.2
SMAD4-213ENST00000591914 ANGPTL6Q8NI99 470 aa22.54■■□□□ 1.2
SMAD4-213ENST00000591914 ZNF671Q8TAW3 534 aa22.54■■□□□ 1.2
SMAD4-213ENST00000591914 PCDHGB1Q9Y5G3 927 aa22.54■■□□□ 1.2
SMAD4-213ENST00000591914 IGHV3OR16-10A0A075B7F0 116 aa22.53■■□□□ 1.2
SMAD4-213ENST00000591914 DAPL1A0PJW8 107 aa22.53■■□□□ 1.2
SMAD4-213ENST00000591914 PQLC2LA1A4F0 135 aa22.53■■□□□ 1.2
SMAD4-213ENST00000591914 A6NIN4 97 aa22.53■■□□□ 1.2
SMAD4-213ENST00000591914 SLC16A6O15403 523 aa22.53■■□□□ 1.2
SMAD4-213ENST00000591914 SYT7O43581 403 aa22.53■■□□□ 1.2
SMAD4-213ENST00000591914 MMP9P14780 707 aa22.53■■□□□ 1.2
SMAD4-213ENST00000591914 GLRA1P23415 457 aa22.53■■□□□ 1.2
SMAD4-213ENST00000591914 KIR3DL2P43630 455 aa22.53■■□□□ 1.2
SMAD4-213ENST00000591914 ZNF91Q05481 1191 aa22.53■■□□□ 1.2
SMAD4-213ENST00000591914 ZNF788Q6ZQV5 615 aa22.53■■□□□ 1.2
SMAD4-213ENST00000591914 ACBD7Q8N6N7 88 aa22.53■■□□□ 1.2
SMAD4-213ENST00000591914 SIGLECL1Q8N7X8 197 aa22.53■■□□□ 1.2
SMAD4-213ENST00000591914 ZDHHC22Q8N966 263 aa22.53■■□□□ 1.2
SMAD4-213ENST00000591914 CCDC54Q8NEL0 328 aa22.53■■□□□ 1.2
SMAD4-213ENST00000591914 LGALS12Q96DT0 336 aa22.53■■□□□ 1.2
SMAD4-213ENST00000591914 MS4A7Q9GZW8 240 aaPredicted RBP22.53■■□□□ 1.2
SMAD4-213ENST00000591914 NLKQ9UBE8 527 aa22.53■■□□□ 1.2
SMAD4-213ENST00000591914 RPUSD1Q9UJJ7 312 aaKnown RBP22.53■■□□□ 1.2
SMAD4-213ENST00000591914 ANK2Q01484 3957 aa22.52■■□□□ 1.2
SMAD4-213ENST00000591914 OR2AT4A6NND4 320 aa22.52■■□□□ 1.2
SMAD4-213ENST00000591914 TRIM77I1YAP6 450 aa22.52■■□□□ 1.2
SMAD4-213ENST00000591914 GPR37O15354 613 aa22.52■■□□□ 1.2
SMAD4-213ENST00000591914 NDUFB3O43676 98 aa22.52■■□□□ 1.2
SMAD4-213ENST00000591914 UBCP0CG48 685 aaKnown RBP22.52■■□□□ 1.2
SMAD4-213ENST00000591914 DBTP11182 482 aaKnown RBP22.52■■□□□ 1.2
SMAD4-213ENST00000591914 ZNF573Q86YE8 665 aa22.52■■□□□ 1.2
SMAD4-213ENST00000591914 FAM216AQ8WUB2 273 aa22.52■■□□□ 1.2
SMAD4-213ENST00000591914 Q96MT0 163 aa22.52■■□□□ 1.2
SMAD4-213ENST00000591914 RDH12Q96NR8 316 aa22.52■■□□□ 1.2
SMAD4-213ENST00000591914 GAFA1Q96PS6 74 aa22.52■■□□□ 1.2
SMAD4-213ENST00000591914 PLEKHA1Q9HB21 404 aa22.52■■□□□ 1.2
SMAD4-213ENST00000591914 ANKRD61A6NGH8 418 aa22.51■■□□□ 1.19
SMAD4-213ENST00000591914 NKX6-3A6NJ46 265 aa22.51■■□□□ 1.19
SMAD4-213ENST00000591914 J3QT63 122 aa22.51■■□□□ 1.19
SMAD4-213ENST00000591914 SFTPBP07988 381 aa22.51■■□□□ 1.19
SMAD4-213ENST00000591914 SELLP14151 372 aa22.51■■□□□ 1.19
SMAD4-213ENST00000591914 HAAOP46952 286 aa22.51■■□□□ 1.19
SMAD4-213ENST00000591914 OR12D2P58182 307 aa22.51■■□□□ 1.19
SMAD4-213ENST00000591914 IKZF1Q13422 519 aa22.51■■□□□ 1.19
SMAD4-213ENST00000591914 FDX2Q6P4F2 183 aa22.51■■□□□ 1.19
SMAD4-213ENST00000591914 RBMS3Q6XE24 437 aaKnown RBP22.51■■□□□ 1.19
SMAD4-213ENST00000591914 POC1AQ8NBT0 407 aa22.51■■□□□ 1.19
SMAD4-213ENST00000591914 LY6G5BQ8NDX9 201 aa22.51■■□□□ 1.19
SMAD4-213ENST00000591914 OR2G2Q8NGZ5 317 aa22.51■■□□□ 1.19
SMAD4-213ENST00000591914 TMIGD2Q96BF3 282 aa22.51■■□□□ 1.19
SMAD4-213ENST00000591914 MED30Q96HR3 178 aa22.51■■□□□ 1.19
SMAD4-213ENST00000591914 ZNF48Q96MX3 618 aaPredicted RBP22.51■■□□□ 1.19
SMAD4-213ENST00000591914 WDFY2Q96P53 400 aa22.51■■□□□ 1.19
SMAD4-213ENST00000591914 TBX15Q96SF7 602 aa22.51■■□□□ 1.19
SMAD4-213ENST00000591914 PCGF1Q9BSM1 259 aa22.51■■□□□ 1.19
SMAD4-213ENST00000591914 SIRPDQ9H106 197 aa22.51■■□□□ 1.19
SMAD4-213ENST00000591914 SMPD3Q9NY59 655 aaPredicted RBP22.51■■□□□ 1.19
SMAD4-213ENST00000591914 RASL12Q9NYN1 266 aa22.51■■□□□ 1.19
SMAD4-213ENST00000591914 IGKV1D-17A0A075B6S4 117 aa22.5■■□□□ 1.19
SMAD4-213ENST00000591914 LOC107986453A0A1B0GWG9 222 aa22.5■■□□□ 1.19
SMAD4-213ENST00000591914 SIGLEC5O15389 551 aa22.5■■□□□ 1.19
SMAD4-213ENST00000591914 TOX4O94842 621 aa22.5■■□□□ 1.19
SMAD4-213ENST00000591914 TFF1P04155 84 aa22.5■■□□□ 1.19
SMAD4-213ENST00000591914 ACAA1P09110 424 aaPredicted RBP22.5■■□□□ 1.19
SMAD4-213ENST00000591914 IL13RA1P78552 427 aa22.5■■□□□ 1.19
SMAD4-213ENST00000591914 LRRC10Q5BKY1 277 aa22.5■■□□□ 1.19
SMAD4-213ENST00000591914 DMRTB1Q96MA1 342 aa22.5■■□□□ 1.19
SMAD4-213ENST00000591914 ADI1Q9BV57 179 aa22.5■■□□□ 1.19
SMAD4-213ENST00000591914 ZNF222Q9UK12 451 aa22.5■■□□□ 1.19
SMAD4-213ENST00000591914 H3BSH0 61 aa22.49■■□□□ 1.19
SMAD4-213ENST00000591914 PGA5P0DJD9 388 aa22.49■■□□□ 1.19
SMAD4-213ENST00000591914 PSG2P11465 335 aa22.49■■□□□ 1.19
SMAD4-213ENST00000591914 MPZP25189 248 aa22.49■■□□□ 1.19
SMAD4-213ENST00000591914 ACTA2P62736 377 aa22.49■■□□□ 1.19
SMAD4-213ENST00000591914 ACTG2P63267 376 aa22.49■■□□□ 1.19
SMAD4-213ENST00000591914 DGUOKQ16854 277 aa22.49■■□□□ 1.19
SMAD4-213ENST00000591914 METTL11BQ5VVY1 283 aa22.49■■□□□ 1.19
SMAD4-213ENST00000591914 C10orf35Q96D05 121 aa22.49■■□□□ 1.19
SMAD4-213ENST00000591914 CNTD2Q9H8S5 307 aa22.49■■□□□ 1.19
SMAD4-213ENST00000591914 FRRS1LQ9P0K9 344 aa22.49■■□□□ 1.19
SMAD4-213ENST00000591914 POLDIP2Q9Y2S7 368 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms