RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 COL8A2P25067 703 aa11.51□□□□□ -0.57
VMP1-210ENST00000589823 CALRP27797 417 aaKnown RBP11.51□□□□□ -0.57
VMP1-210ENST00000589823 RPL5P46777 297 aaKnown RBP11.51□□□□□ -0.57
VMP1-210ENST00000589823 HAAOP46952 286 aa11.51□□□□□ -0.57
VMP1-210ENST00000589823 ALDH3B2P48448 385 aa11.51□□□□□ -0.57
VMP1-210ENST00000589823 DDI2Q5TDH0 399 aa11.51□□□□□ -0.57
VMP1-210ENST00000589823 C22orf42Q6IC83 251 aa11.51□□□□□ -0.57
VMP1-210ENST00000589823 ASPHD2Q6ICH7 369 aa11.51□□□□□ -0.57
VMP1-210ENST00000589823 HAGHLQ6PII5 290 aaPredicted RBP11.51□□□□□ -0.57
VMP1-210ENST00000589823 GPR141Q7Z602 305 aa11.51□□□□□ -0.57
VMP1-210ENST00000589823 C1orf87Q8N0U7 546 aa11.51□□□□□ -0.57
VMP1-210ENST00000589823 ZNF525Q8N782 197 aa11.51□□□□□ -0.57
VMP1-210ENST00000589823 OR51A2Q8NGJ7 313 aa11.51□□□□□ -0.57
VMP1-210ENST00000589823 ZNF420Q8TAQ5 688 aaPredicted RBP11.51□□□□□ -0.57
VMP1-210ENST00000589823 RPL3LQ92901 407 aaKnown RBP11.51□□□□□ -0.57
VMP1-210ENST00000589823 YIPF5Q969M3 257 aa11.51□□□□□ -0.57
VMP1-210ENST00000589823 TMIGD2Q96BF3 282 aa11.51□□□□□ -0.57
VMP1-210ENST00000589823 GPER1Q99527 375 aa11.51□□□□□ -0.57
VMP1-210ENST00000589823 CHCHD6Q9BRQ6 235 aa11.51□□□□□ -0.57
VMP1-210ENST00000589823 TLNRD1Q9H1K6 362 aa11.51□□□□□ -0.57
VMP1-210ENST00000589823 OR51I2Q9H344 312 aa11.51□□□□□ -0.57
VMP1-210ENST00000589823 CHODLQ9H9P2 273 aa11.51□□□□□ -0.57
VMP1-210ENST00000589823 FLNBO75369 2602 aaKnown RBP11.51□□□□□ -0.57
VMP1-210ENST00000589823 POLQO75417 2590 aa11.5□□□□□ -0.57
VMP1-210ENST00000589823 LOC100506127A0A0U1RQW1 187 aa11.5□□□□□ -0.57
VMP1-210ENST00000589823 MEGF11A6BM72 1044 aa11.5□□□□□ -0.57
VMP1-210ENST00000589823 TRIM64BA6NI03 449 aa11.5□□□□□ -0.57
VMP1-210ENST00000589823 CLDN25C9JDP6 229 aa11.5□□□□□ -0.57
VMP1-210ENST00000589823 J3QT63 122 aa11.5□□□□□ -0.57
VMP1-210ENST00000589823 CDIPTO14735 213 aa11.5□□□□□ -0.57
VMP1-210ENST00000589823 FGF9P31371 208 aaPredicted RBP11.5□□□□□ -0.57
VMP1-210ENST00000589823 DSCR9P59020 149 aa11.5□□□□□ -0.57
VMP1-210ENST00000589823 KISS1Q15726 138 aa11.5□□□□□ -0.57
VMP1-210ENST00000589823 ZNF181Q2M3W8 571 aa11.5□□□□□ -0.57
VMP1-210ENST00000589823 GDPGP1Q6ZNW5 385 aa11.5□□□□□ -0.57
VMP1-210ENST00000589823 SATL1Q86VE3 508 aa11.5□□□□□ -0.57
VMP1-210ENST00000589823 ANGPTL5Q86XS5 388 aa11.5□□□□□ -0.57
VMP1-210ENST00000589823 NKAIN3Q8N8D7 197 aa11.5□□□□□ -0.57
VMP1-210ENST00000589823 SCCPDHQ8NBX0 429 aa11.5□□□□□ -0.57
VMP1-210ENST00000589823 OR52N4Q8NGI2 321 aa11.5□□□□□ -0.57
VMP1-210ENST00000589823 ZNF671Q8TAW3 534 aa11.5□□□□□ -0.57
VMP1-210ENST00000589823 Q8TCH9 128 aa11.5□□□□□ -0.57
VMP1-210ENST00000589823 SPACA5Q96QH8 159 aa11.5□□□□□ -0.57
VMP1-210ENST00000589823 FOXC2Q99958 501 aa11.5□□□□□ -0.57
VMP1-210ENST00000589823 FUNDC2Q9BWH2 189 aa11.5□□□□□ -0.57
VMP1-210ENST00000589823 PPIL3Q9H2H8 161 aaKnown RBP11.5□□□□□ -0.57
VMP1-210ENST00000589823 SNTG1Q9NSN8 517 aa11.5□□□□□ -0.57
VMP1-210ENST00000589823 TMEM106BQ9NUM4 274 aa11.5□□□□□ -0.57
VMP1-210ENST00000589823 TXNL4BQ9NX01 149 aaKnown RBP11.5□□□□□ -0.57
VMP1-210ENST00000589823 RNF7Q9UBF6 113 aa11.5□□□□□ -0.57
VMP1-210ENST00000589823 POLDIP2Q9Y2S7 368 aa11.5□□□□□ -0.57
VMP1-210ENST00000589823 CACNG2Q9Y698 323 aa11.5□□□□□ -0.57
VMP1-210ENST00000589823 NAV2Q8IVL1 2488 aa11.5□□□□□ -0.57
VMP1-210ENST00000589823 ANKRD17O75179 2603 aaKnown RBP11.5□□□□□ -0.57
VMP1-210ENST00000589823 IGKV1-27A0A075B6S5 117 aa11.49□□□□□ -0.57
VMP1-210ENST00000589823 AIREO43918 545 aa11.49□□□□□ -0.57
VMP1-210ENST00000589823 RP2O75695 350 aa11.49□□□□□ -0.57
VMP1-210ENST00000589823 CYB5AP00167 134 aa11.49□□□□□ -0.57
VMP1-210ENST00000589823 ZNF93P35789 620 aaPredicted RBP11.49□□□□□ -0.57
VMP1-210ENST00000589823 PMELP40967 661 aa11.49□□□□□ -0.57
VMP1-210ENST00000589823 POU3F4P49335 361 aa11.49□□□□□ -0.57
VMP1-210ENST00000589823 ART1P52961 327 aa11.49□□□□□ -0.57
VMP1-210ENST00000589823 TMEM33P57088 247 aa11.49□□□□□ -0.57
VMP1-210ENST00000589823 CLEC12BQ2HXU8 276 aa11.49□□□□□ -0.57
VMP1-210ENST00000589823 SHEQ5VZ18 495 aa11.49□□□□□ -0.57
VMP1-210ENST00000589823 PRSS57Q6UWY2 283 aa11.49□□□□□ -0.57
VMP1-210ENST00000589823 ZNF826PQ6ZT77 177 aa11.49□□□□□ -0.57
VMP1-210ENST00000589823 PEG10Q86TG7 708 aaKnown RBP11.49□□□□□ -0.57
VMP1-210ENST00000589823 TGIF2LYQ8IUE0 185 aa11.49□□□□□ -0.57
VMP1-210ENST00000589823 C11orf53Q8IXP5 236 aa11.49□□□□□ -0.57
VMP1-210ENST00000589823 MKXQ8IYA7 352 aa11.49□□□□□ -0.57
VMP1-210ENST00000589823 PNLDC1Q8NA58 520 aaKnown RBP11.49□□□□□ -0.57
VMP1-210ENST00000589823 LRRC29Q8WV35 223 aa11.49□□□□□ -0.57
VMP1-210ENST00000589823 AQP3Q92482 292 aa11.49□□□□□ -0.57
VMP1-210ENST00000589823 FAM168AQ92567 244 aa11.49□□□□□ -0.57
VMP1-210ENST00000589823 RFT1Q96AA3 541 aa11.49□□□□□ -0.57
VMP1-210ENST00000589823 PIMREGQ9BSJ6 248 aa11.49□□□□□ -0.57
VMP1-210ENST00000589823 PKIBQ9C010 78 aa11.49□□□□□ -0.57
VMP1-210ENST00000589823 CSMD2Q7Z408 3487 aa11.49□□□□□ -0.57
VMP1-210ENST00000589823 TRAV1-2A0A0B4J238 106 aa11.48□□□□□ -0.57
VMP1-210ENST00000589823 TMEM178BH3BS89 294 aa11.48□□□□□ -0.57
VMP1-210ENST00000589823 NDUFS8O00217 210 aa11.48□□□□□ -0.57
VMP1-210ENST00000589823 PDCD5O14737 125 aa11.48□□□□□ -0.57
VMP1-210ENST00000589823 PPIHO43447 177 aaKnown RBP11.48□□□□□ -0.57
VMP1-210ENST00000589823 CYB5R3P00387 301 aaPredicted RBP11.48□□□□□ -0.57
VMP1-210ENST00000589823 PLATP00750 562 aa11.48□□□□□ -0.57
VMP1-210ENST00000589823 MPZP25189 248 aa11.48□□□□□ -0.57
VMP1-210ENST00000589823 CFHR2P36980 270 aa11.48□□□□□ -0.57
VMP1-210ENST00000589823 GPR6P46095 362 aaPredicted RBP11.48□□□□□ -0.57
VMP1-210ENST00000589823 IL24Q13007 206 aa11.48□□□□□ -0.57
VMP1-210ENST00000589823 Q5PR19 223 aa11.48□□□□□ -0.57
VMP1-210ENST00000589823 GPR107Q5VW38 600 aa11.48□□□□□ -0.57
VMP1-210ENST00000589823 GLT8D1Q68CQ7 371 aa11.48□□□□□ -0.57
VMP1-210ENST00000589823 WDR82Q6UXN9 313 aa11.48□□□□□ -0.57
VMP1-210ENST00000589823 SLC25A26Q70HW3 274 aa11.48□□□□□ -0.57
VMP1-210ENST00000589823 LRRTM1Q86UE6 522 aa11.48□□□□□ -0.57
VMP1-210ENST00000589823 CALHM1Q8IU99 346 aa11.48□□□□□ -0.57
VMP1-210ENST00000589823 CDH26Q8IXH8 852 aa11.48□□□□□ -0.57
VMP1-210ENST00000589823 JAGN1Q8N5M9 183 aa11.48□□□□□ -0.57
VMP1-210ENST00000589823 BOLLQ8N9W6 283 aaKnown RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms