RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 TGM4P49221 684 aa9.66□□□□□ -0.86
RFX1-204ENST00000588885 ZNF121P58317 390 aaPredicted RBP9.66□□□□□ -0.86
RFX1-204ENST00000588885 ZNF154Q13106 437 aa9.66□□□□□ -0.86
RFX1-204ENST00000588885 TPBGQ13641 420 aa9.66□□□□□ -0.86
RFX1-204ENST00000588885 ZNF829Q3KNS6 432 aaPredicted RBP9.66□□□□□ -0.86
RFX1-204ENST00000588885 WDR38Q5JTN6 314 aa9.66□□□□□ -0.86
RFX1-204ENST00000588885 GPR107Q5VW38 600 aa9.66□□□□□ -0.86
RFX1-204ENST00000588885 SFRP4Q6FHJ7 346 aaPredicted RBP9.66□□□□□ -0.86
RFX1-204ENST00000588885 ZNF826PQ6ZT77 177 aa9.66□□□□□ -0.86
RFX1-204ENST00000588885 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.66□□□□□ -0.86
RFX1-204ENST00000588885 CLVS1Q8IUQ0 354 aaPredicted RBP9.66□□□□□ -0.86
RFX1-204ENST00000588885 C1orf87Q8N0U7 546 aa9.66□□□□□ -0.86
RFX1-204ENST00000588885 PRSS35Q8N3Z0 413 aa9.66□□□□□ -0.86
RFX1-204ENST00000588885 TEX29Q8N6K0 151 aa9.66□□□□□ -0.86
RFX1-204ENST00000588885 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.66□□□□□ -0.86
RFX1-204ENST00000588885 RPS4Y2Q8TD47 263 aa9.66□□□□□ -0.86
RFX1-204ENST00000588885 ZNF418Q8TF45 676 aaPredicted RBP9.66□□□□□ -0.86
RFX1-204ENST00000588885 SMIM19Q96E16 107 aa9.66□□□□□ -0.86
RFX1-204ENST00000588885 REEP6Q96HR9 211 aa9.66□□□□□ -0.86
RFX1-204ENST00000588885 PGLYRP3Q96LB9 341 aa9.66□□□□□ -0.86
RFX1-204ENST00000588885 MYCBPQ99417 103 aaPredicted RBP9.66□□□□□ -0.86
RFX1-204ENST00000588885 FUNDC2Q9BWH2 189 aa9.66□□□□□ -0.86
RFX1-204ENST00000588885 PPP1R3EQ9H7J1 279 aa9.66□□□□□ -0.86
RFX1-204ENST00000588885 C1orf123Q9NWV4 160 aa9.66□□□□□ -0.86
RFX1-204ENST00000588885 NDUFB11Q9NX14 153 aa9.66□□□□□ -0.86
RFX1-204ENST00000588885 FAM206AQ9NX38 181 aa9.66□□□□□ -0.86
RFX1-204ENST00000588885 ZNF319Q9P2F9 582 aa9.66□□□□□ -0.86
RFX1-204ENST00000588885 OR5V1Q9UGF6 321 aa9.66□□□□□ -0.86
RFX1-204ENST00000588885 ENPP5Q9UJA9 477 aa9.66□□□□□ -0.86
RFX1-204ENST00000588885 GTF2A1LQ9UNN4 478 aa9.66□□□□□ -0.86
RFX1-204ENST00000588885 AUP1Q9Y679 476 aa9.66□□□□□ -0.86
RFX1-204ENST00000588885 CEPT1Q9Y6K0 416 aa9.66□□□□□ -0.86
RFX1-204ENST00000588885 DOCK11Q5JSL3 2073 aa9.66□□□□□ -0.86
RFX1-204ENST00000588885 A6NHS1 94 aa9.65□□□□□ -0.86
RFX1-204ENST00000588885 A6NLC8 198 aa9.65□□□□□ -0.86
RFX1-204ENST00000588885 ANKRD30BLA7E2S9 258 aa9.65□□□□□ -0.86
RFX1-204ENST00000588885 C3orf80F5H4A9 247 aa9.65□□□□□ -0.86
RFX1-204ENST00000588885 LOC110117498-PIK3R3F6TDL0 507 aa9.65□□□□□ -0.86
RFX1-204ENST00000588885 ST8SIA5O15466 376 aa9.65□□□□□ -0.86
RFX1-204ENST00000588885 XRCC2O43543 280 aa9.65□□□□□ -0.86
RFX1-204ENST00000588885 GMDSO60547 372 aa9.65□□□□□ -0.86
RFX1-204ENST00000588885 ZNF254O75437 659 aa9.65□□□□□ -0.86
RFX1-204ENST00000588885 CELP19835 753 aa9.65□□□□□ -0.86
RFX1-204ENST00000588885 CD80P33681 288 aa9.65□□□□□ -0.86
RFX1-204ENST00000588885 GATA4P43694 442 aa9.65□□□□□ -0.86
RFX1-204ENST00000588885 PRR20EP86478 221 aa9.65□□□□□ -0.86
RFX1-204ENST00000588885 PRR20CP86479 221 aa9.65□□□□□ -0.86
RFX1-204ENST00000588885 PRR20DP86480 221 aa9.65□□□□□ -0.86
RFX1-204ENST00000588885 PRR20BP86481 221 aa9.65□□□□□ -0.86
RFX1-204ENST00000588885 PRR20AP86496 221 aa9.65□□□□□ -0.86
RFX1-204ENST00000588885 FAM3AP98173 230 aa9.65□□□□□ -0.86
RFX1-204ENST00000588885 MRPL28Q13084 256 aaKnown RBP9.65□□□□□ -0.86
RFX1-204ENST00000588885 ALKBH1Q13686 389 aaKnown RBP9.65□□□□□ -0.86
RFX1-204ENST00000588885 ZNF404Q494X3 552 aa9.65□□□□□ -0.86
RFX1-204ENST00000588885 DMKNQ6E0U4 476 aaPredicted RBP9.65□□□□□ -0.86
RFX1-204ENST00000588885 RPL22L1Q6P5R6 122 aaKnown RBP9.65□□□□□ -0.86
RFX1-204ENST00000588885 DEGS2Q6QHC5 323 aa9.65□□□□□ -0.86
RFX1-204ENST00000588885 SLC16A12Q6ZSM3 486 aa9.65□□□□□ -0.86
RFX1-204ENST00000588885 KCTD20Q7Z5Y7 419 aa9.65□□□□□ -0.86
RFX1-204ENST00000588885 CATSPERDQ86XM0 798 aa9.65□□□□□ -0.86
RFX1-204ENST00000588885 BPIFB2Q8N4F0 458 aa9.65□□□□□ -0.86
RFX1-204ENST00000588885 CELF2-AS1Q8N7Q2 184 aa9.65□□□□□ -0.86
RFX1-204ENST00000588885 OR13C5Q8NGS8 318 aa9.65□□□□□ -0.86
RFX1-204ENST00000588885 OR2G2Q8NGZ5 317 aa9.65□□□□□ -0.86
RFX1-204ENST00000588885 RGP1Q92546 391 aaPredicted RBP9.65□□□□□ -0.86
RFX1-204ENST00000588885 RPL3LQ92901 407 aaKnown RBP9.65□□□□□ -0.86
RFX1-204ENST00000588885 PGAM5Q96HS1 289 aa9.65□□□□□ -0.86
RFX1-204ENST00000588885 TMED9Q9BVK6 235 aa9.65□□□□□ -0.86
RFX1-204ENST00000588885 SSBP3Q9BWW4 388 aaPredicted RBP9.65□□□□□ -0.86
RFX1-204ENST00000588885 SLC22A4Q9H015 551 aa9.65□□□□□ -0.86
RFX1-204ENST00000588885 OR10A2Q9H208 303 aa9.65□□□□□ -0.86
RFX1-204ENST00000588885 OR51E2Q9H255 320 aa9.65□□□□□ -0.86
RFX1-204ENST00000588885 FN3KRPQ9HA64 309 aa9.65□□□□□ -0.86
RFX1-204ENST00000588885 BATF3Q9NR55 127 aa9.65□□□□□ -0.86
RFX1-204ENST00000588885 MRPL15Q9P015 296 aaKnown RBP9.65□□□□□ -0.86
RFX1-204ENST00000588885 RNF7Q9UBF6 113 aa9.65□□□□□ -0.86
RFX1-204ENST00000588885 MIOXQ9UGB7 285 aa9.65□□□□□ -0.86
RFX1-204ENST00000588885 SLC22A13Q9Y226 551 aa9.65□□□□□ -0.86
RFX1-204ENST00000588885 SF3B6Q9Y3B4 125 aaKnown RBP9.65□□□□□ -0.86
RFX1-204ENST00000588885 INSIG2Q9Y5U4 225 aa9.65□□□□□ -0.86
RFX1-204ENST00000588885 SMIM31A0A1B0GVY4 71 aa9.64□□□□□ -0.87
RFX1-204ENST00000588885 hCG_1807616A0A1W2PRN6 198 aa9.64□□□□□ -0.87
RFX1-204ENST00000588885 OGG1O15527 345 aa9.64□□□□□ -0.87
RFX1-204ENST00000588885 GABARAPO95166 117 aa9.64□□□□□ -0.87
RFX1-204ENST00000588885 ZNF12P17014 697 aa9.64□□□□□ -0.87
RFX1-204ENST00000588885 PITPNBP48739 271 aa9.64□□□□□ -0.87
RFX1-204ENST00000588885 GSK3AP49840 483 aa9.64□□□□□ -0.87
RFX1-204ENST00000588885 GNB2P62879 340 aa9.64□□□□□ -0.87
RFX1-204ENST00000588885 OR8B8Q15620 311 aa9.64□□□□□ -0.87
RFX1-204ENST00000588885 ODF4Q2M2E3 257 aa9.64□□□□□ -0.87
RFX1-204ENST00000588885 ZNF181Q2M3W8 571 aa9.64□□□□□ -0.87
RFX1-204ENST00000588885 CCDC58Q4VC31 144 aa9.64□□□□□ -0.87
RFX1-204ENST00000588885 BCL2L15Q5TBC7 163 aa9.64□□□□□ -0.87
RFX1-204ENST00000588885 FDX2Q6P4F2 183 aa9.64□□□□□ -0.87
RFX1-204ENST00000588885 PRSS45Q7RTY3 260 aa9.64□□□□□ -0.87
RFX1-204ENST00000588885 OR8B3Q8NGG8 313 aa9.64□□□□□ -0.87
RFX1-204ENST00000588885 OR8S1Q8NH09 359 aa9.64□□□□□ -0.87
RFX1-204ENST00000588885 Q8TCH9 128 aa9.64□□□□□ -0.87
RFX1-204ENST00000588885 TMEM203Q969S6 136 aa9.64□□□□□ -0.87
RFX1-204ENST00000588885 ERGIC1Q969X5 290 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms