RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 PLPP2O43688 288 aa16.89■□□□□ 0.29
DDX39A-207ENST00000588542 WNT2P09544 360 aa16.89■□□□□ 0.29
DDX39A-207ENST00000588542 DVL1P1P54792 670 aaPredicted RBP16.89■□□□□ 0.29
DDX39A-207ENST00000588542 SEC61A1P61619 476 aaKnown RBP16.89■□□□□ 0.29
DDX39A-207ENST00000588542 TEX36Q5VZQ5 186 aa16.89■□□□□ 0.29
DDX39A-207ENST00000588542 LYPD2Q6UXB3 125 aa16.89■□□□□ 0.29
DDX39A-207ENST00000588542 OR10Z1Q8NGY1 313 aa16.89■□□□□ 0.29
DDX39A-207ENST00000588542 PP6455Q8WZ26 134 aa16.89■□□□□ 0.29
DDX39A-207ENST00000588542 RGP1Q92546 391 aaPredicted RBP16.89■□□□□ 0.29
DDX39A-207ENST00000588542 CNBD2Q96M20 576 aa16.89■□□□□ 0.29
DDX39A-207ENST00000588542 RHBDL1O75783 438 aa16.88■□□□□ 0.29
DDX39A-207ENST00000588542 ZFP36P26651 326 aaKnown RBP16.88■□□□□ 0.29
DDX39A-207ENST00000588542 SLC35A2P78381 396 aa16.88■□□□□ 0.29
DDX39A-207ENST00000588542 RNLSQ5VYX0 342 aa16.88■□□□□ 0.29
DDX39A-207ENST00000588542 DCDC5Q6ZRR9 648 aa16.88■□□□□ 0.29
DDX39A-207ENST00000588542 FAM90A1Q86YD7 464 aa16.88■□□□□ 0.29
DDX39A-207ENST00000588542 NANOGP1Q8N7R0 232 aa16.88■□□□□ 0.29
DDX39A-207ENST00000588542 OR13C3Q8NGS6 347 aa16.88■□□□□ 0.29
DDX39A-207ENST00000588542 OR51F2Q8NH61 342 aa16.88■□□□□ 0.29
DDX39A-207ENST00000588542 AQP3Q92482 292 aa16.88■□□□□ 0.29
DDX39A-207ENST00000588542 SEH1LQ96EE3 360 aa16.88■□□□□ 0.29
DDX39A-207ENST00000588542 COMMD4Q9H0A8 199 aa16.88■□□□□ 0.29
DDX39A-207ENST00000588542 DUSP21Q9H596 190 aa16.88■□□□□ 0.29
DDX39A-207ENST00000588542 TMEM160Q9NX00 188 aa16.88■□□□□ 0.29
DDX39A-207ENST00000588542 SCN3BQ9NY72 215 aa16.88■□□□□ 0.29
DDX39A-207ENST00000588542 MIOXQ9UGB7 285 aa16.88■□□□□ 0.29
DDX39A-207ENST00000588542 KCNS2Q9ULS6 477 aa16.88■□□□□ 0.29
DDX39A-207ENST00000588542 MXRA5Q9NR99 2828 aa16.87■□□□□ 0.29
DDX39A-207ENST00000588542 IGHV3OR15-7A0A075B7D8 119 aa16.87■□□□□ 0.29
DDX39A-207ENST00000588542 TRAV38-1A0A0B4J264 116 aa16.87■□□□□ 0.29
DDX39A-207ENST00000588542 IGKV1-9A0A0C4DH69 117 aa16.87■□□□□ 0.29
DDX39A-207ENST00000588542 GATBO75879 557 aaKnown RBP16.87■□□□□ 0.29
DDX39A-207ENST00000588542 HAGHLQ6PII5 290 aaPredicted RBP16.87■□□□□ 0.29
DDX39A-207ENST00000588542 UTS2BQ765I0 119 aa16.87■□□□□ 0.29
DDX39A-207ENST00000588542 TRMT10AQ8TBZ6 339 aaKnown RBP16.87■□□□□ 0.29
DDX39A-207ENST00000588542 NPRL2Q8WTW4 380 aa16.87■□□□□ 0.29
DDX39A-207ENST00000588542 TMEM186Q96B77 213 aa16.87■□□□□ 0.29
DDX39A-207ENST00000588542 ZNF184Q99676 751 aaPredicted RBP16.87■□□□□ 0.29
DDX39A-207ENST00000588542 WDR13Q9H1Z4 485 aa16.87■□□□□ 0.29
DDX39A-207ENST00000588542 HIF1ANQ9NWT6 349 aa16.87■□□□□ 0.29
DDX39A-207ENST00000588542 IGKV1-27A0A075B6S5 117 aa16.86■□□□□ 0.29
DDX39A-207ENST00000588542 KIAA1324LA8MWY0 1029 aaPredicted RBP16.86■□□□□ 0.29
DDX39A-207ENST00000588542 AKR7A2O43488 359 aa16.86■□□□□ 0.29
DDX39A-207ENST00000588542 RRP9O43818 475 aaKnown RBP16.86■□□□□ 0.29
DDX39A-207ENST00000588542 SERPINA3P01011 423 aa16.86■□□□□ 0.29
DDX39A-207ENST00000588542 RPSAP08865 295 aaKnown RBP16.86■□□□□ 0.29
DDX39A-207ENST00000588542 RPS2P15880 293 aaKnown RBP16.86■□□□□ 0.29
DDX39A-207ENST00000588542 ZNF20P17024 532 aa16.86■□□□□ 0.29
DDX39A-207ENST00000588542 CPT2P23786 658 aa16.86■□□□□ 0.29
DDX39A-207ENST00000588542 CRHBPP24387 322 aa16.86■□□□□ 0.29
DDX39A-207ENST00000588542 HAAOP46952 286 aa16.86■□□□□ 0.29
DDX39A-207ENST00000588542 WNT4P56705 351 aa16.86■□□□□ 0.29
DDX39A-207ENST00000588542 LCN2P80188 198 aa16.86■□□□□ 0.29
DDX39A-207ENST00000588542 DMKNQ6E0U4 476 aaPredicted RBP16.86■□□□□ 0.29
DDX39A-207ENST00000588542 ZNF841Q6ZN19 808 aa16.86■□□□□ 0.29
DDX39A-207ENST00000588542 GLCCI1Q86VQ1 547 aa16.86■□□□□ 0.29
DDX39A-207ENST00000588542 ZNF573Q86YE8 665 aa16.86■□□□□ 0.29
DDX39A-207ENST00000588542 CALHM1Q8IU99 346 aa16.86■□□□□ 0.29
DDX39A-207ENST00000588542 ZFP41Q8N8Y5 198 aa16.86■□□□□ 0.29
DDX39A-207ENST00000588542 MYDGFQ969H8 173 aa16.86■□□□□ 0.29
DDX39A-207ENST00000588542 SMIM19Q96E16 107 aa16.86■□□□□ 0.29
DDX39A-207ENST00000588542 NEIL1Q96FI4 390 aaPredicted RBP16.86■□□□□ 0.29
DDX39A-207ENST00000588542 TECTBQ96PL2 329 aa16.86■□□□□ 0.29
DDX39A-207ENST00000588542 CDCA4Q9BXL8 241 aa16.86■□□□□ 0.29
DDX39A-207ENST00000588542 TRIM36Q9NQ86 728 aa16.86■□□□□ 0.29
DDX39A-207ENST00000588542 SLC7A11Q9UPY5 501 aa16.86■□□□□ 0.29
DDX39A-207ENST00000588542 TPRKBQ9Y3C4 175 aa16.86■□□□□ 0.29
DDX39A-207ENST00000588542 CUBNO60494 3623 aa16.85■□□□□ 0.29
DDX39A-207ENST00000588542 C2CD3Q4AC94 2353 aa16.85■□□□□ 0.29
DDX39A-207ENST00000588542 TRAV20A0A0B4J274 112 aa16.85■□□□□ 0.29
DDX39A-207ENST00000588542 FAM230AA0A1W2PPH8 454 aa16.85■□□□□ 0.29
DDX39A-207ENST00000588542 A8MXK9 166 aa16.85■□□□□ 0.29
DDX39A-207ENST00000588542 J3QT63 122 aa16.85■□□□□ 0.29
DDX39A-207ENST00000588542 MYL12BO14950 172 aa16.85■□□□□ 0.29
DDX39A-207ENST00000588542 SYNGR1O43759 233 aa16.85■□□□□ 0.29
DDX39A-207ENST00000588542 GYPAP02724 150 aa16.85■□□□□ 0.29
DDX39A-207ENST00000588542 HOXB4P17483 251 aaPredicted RBP16.85■□□□□ 0.29
DDX39A-207ENST00000588542 ATF1P18846 271 aa16.85■□□□□ 0.29
DDX39A-207ENST00000588542 MPZP25189 248 aa16.85■□□□□ 0.29
DDX39A-207ENST00000588542 FUT6P51993 359 aa16.85■□□□□ 0.29
DDX39A-207ENST00000588542 IRF3Q14653 427 aa16.85■□□□□ 0.29
DDX39A-207ENST00000588542 KCNJ8Q15842 424 aa16.85■□□□□ 0.29
DDX39A-207ENST00000588542 ANGPTL5Q86XS5 388 aa16.85■□□□□ 0.29
DDX39A-207ENST00000588542 CTSZQ9UBR2 303 aa16.85■□□□□ 0.29
DDX39A-207ENST00000588542 ERGIC3Q9Y282 383 aa16.85■□□□□ 0.29
DDX39A-207ENST00000588542 LRCH1Q9Y2L9 728 aa16.85■□□□□ 0.29
DDX39A-207ENST00000588542 POLR3KQ9Y2Y1 108 aaPredicted RBP16.85■□□□□ 0.29
DDX39A-207ENST00000588542 PHF1O43189 567 aaPredicted RBP16.84■□□□□ 0.29
DDX39A-207ENST00000588542 CRLF1O75462 422 aa16.84■□□□□ 0.29
DDX39A-207ENST00000588542 FOXH1O75593 365 aa16.84■□□□□ 0.29
DDX39A-207ENST00000588542 MUC1P15941 1255 aaPredicted RBP16.84■□□□□ 0.29
DDX39A-207ENST00000588542 GMFBP60983 142 aa16.84■□□□□ 0.29
DDX39A-207ENST00000588542 CNN3Q15417 329 aaKnown RBP16.84■□□□□ 0.29
DDX39A-207ENST00000588542 MICBQ29980 383 aa16.84■□□□□ 0.29
DDX39A-207ENST00000588542 CR1LQ2VPA4 569 aa16.84■□□□□ 0.29
DDX39A-207ENST00000588542 ESCO2Q56NI9 601 aa16.84■□□□□ 0.29
DDX39A-207ENST00000588542 PARP16Q8N5Y8 322 aa16.84■□□□□ 0.29
DDX39A-207ENST00000588542 DNAAF1Q8NEP3 725 aa16.84■□□□□ 0.29
DDX39A-207ENST00000588542 OR8B3Q8NGG8 313 aa16.84■□□□□ 0.29
DDX39A-207ENST00000588542 ZNF671Q8TAW3 534 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms