RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 S100A13Q99584 98 aa10.83□□□□□ -0.68
VMP1-202ENST00000585847 GFI1Q99684 422 aa10.83□□□□□ -0.68
VMP1-202ENST00000585847 ESRP2Q9H6T0 727 aaKnown RBP10.83□□□□□ -0.68
VMP1-202ENST00000585847 RHBDL2Q9NX52 303 aa10.83□□□□□ -0.68
VMP1-202ENST00000585847 IL36GQ9NZH8 169 aa10.83□□□□□ -0.68
VMP1-202ENST00000585847 N6AMT1Q9Y5N5 214 aa10.83□□□□□ -0.68
VMP1-202ENST00000585847 ITPR3Q14573 2671 aa10.82□□□□□ -0.68
VMP1-202ENST00000585847 AKAP9Q99996 3911 aa10.82□□□□□ -0.68
VMP1-202ENST00000585847 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.82□□□□□ -0.68
VMP1-202ENST00000585847 C5orf63A6NC05 138 aa10.82□□□□□ -0.68
VMP1-202ENST00000585847 CD300LBA8K4G0 201 aa10.82□□□□□ -0.68
VMP1-202ENST00000585847 E7EQL1 145 aa10.82□□□□□ -0.68
VMP1-202ENST00000585847 KITLGP21583 273 aa10.82□□□□□ -0.68
VMP1-202ENST00000585847 SELENOVP59797 346 aa10.82□□□□□ -0.68
VMP1-202ENST00000585847 NKX6-1P78426 367 aaPredicted RBP10.82□□□□□ -0.68
VMP1-202ENST00000585847 TLE4Q04727 773 aa10.82□□□□□ -0.68
VMP1-202ENST00000585847 KISS1Q15726 138 aa10.82□□□□□ -0.68
VMP1-202ENST00000585847 ZNF718Q3SXZ3 478 aa10.82□□□□□ -0.68
VMP1-202ENST00000585847 CNIH2Q6PI25 160 aa10.82□□□□□ -0.68
VMP1-202ENST00000585847 FAM131AQ6UXB0 335 aa10.82□□□□□ -0.68
VMP1-202ENST00000585847 SPNS3Q6ZMD2 512 aa10.82□□□□□ -0.68
VMP1-202ENST00000585847 NAA40Q86UY6 237 aa10.82□□□□□ -0.68
VMP1-202ENST00000585847 ZDHHC23Q8IYP9 409 aa10.82□□□□□ -0.68
VMP1-202ENST00000585847 NUP37Q8NFH4 326 aa10.82□□□□□ -0.68
VMP1-202ENST00000585847 PXT1Q8NFP0 134 aa10.82□□□□□ -0.68
VMP1-202ENST00000585847 OR5A2Q8NGI9 324 aa10.82□□□□□ -0.68
VMP1-202ENST00000585847 OR2AE1Q8NHA4 323 aa10.82□□□□□ -0.68
VMP1-202ENST00000585847 GPER1Q99527 375 aa10.82□□□□□ -0.68
VMP1-202ENST00000585847 SOSTQ9BQB4 213 aa10.82□□□□□ -0.68
VMP1-202ENST00000585847 MIXL1Q9H2W2 232 aa10.82□□□□□ -0.68
VMP1-202ENST00000585847 PLEKHF2Q9H8W4 249 aa10.82□□□□□ -0.68
VMP1-202ENST00000585847 DIABLOQ9NR28 239 aa10.82□□□□□ -0.68
VMP1-202ENST00000585847 FBXO9Q9UK97 447 aaPredicted RBP10.82□□□□□ -0.68
VMP1-202ENST00000585847 RAB22AQ9UL26 194 aa10.82□□□□□ -0.68
VMP1-202ENST00000585847 RNF115Q9Y4L5 304 aa10.82□□□□□ -0.68
VMP1-202ENST00000585847 V9GYH0 126 aa10.82□□□□□ -0.68
VMP1-202ENST00000585847 ROS1P08922 2347 aa10.82□□□□□ -0.68
VMP1-202ENST00000585847 PLCE1Q9P212 2302 aa10.81□□□□□ -0.68
VMP1-202ENST00000585847 TMEM210A6NLX4 147 aa10.81□□□□□ -0.68
VMP1-202ENST00000585847 IQCF6A8MYZ5 107 aa10.81□□□□□ -0.68
VMP1-202ENST00000585847 GMDSO60547 372 aa10.81□□□□□ -0.68
VMP1-202ENST00000585847 HPGDSO60760 199 aa10.81□□□□□ -0.68
VMP1-202ENST00000585847 UPK1BO75841 260 aa10.81□□□□□ -0.68
VMP1-202ENST00000585847 CYB5AP00167 134 aa10.81□□□□□ -0.68
VMP1-202ENST00000585847 CD3EP07766 207 aa10.81□□□□□ -0.68
VMP1-202ENST00000585847 CHRM2P08172 466 aa10.81□□□□□ -0.68
VMP1-202ENST00000585847 SLC2A2P11168 524 aaPredicted RBP10.81□□□□□ -0.68
VMP1-202ENST00000585847 NAT2P11245 290 aa10.81□□□□□ -0.68
VMP1-202ENST00000585847 ACKR3P25106 362 aa10.81□□□□□ -0.68
VMP1-202ENST00000585847 GCH1P30793 250 aa10.81□□□□□ -0.68
VMP1-202ENST00000585847 GLRXP35754 106 aa10.81□□□□□ -0.68
VMP1-202ENST00000585847 POU3F4P49335 361 aa10.81□□□□□ -0.68
VMP1-202ENST00000585847 CAV3P56539 151 aa10.81□□□□□ -0.68
VMP1-202ENST00000585847 SSBP1Q04837 148 aaKnown RBP10.81□□□□□ -0.68
VMP1-202ENST00000585847 CEACAM21Q3KPI0 293 aa10.81□□□□□ -0.68
VMP1-202ENST00000585847 TMEM255AQ5JRV8 349 aa10.81□□□□□ -0.68
VMP1-202ENST00000585847 HES5Q5TA89 166 aa10.81□□□□□ -0.68
VMP1-202ENST00000585847 PLCXD3Q63HM9 321 aa10.81□□□□□ -0.68
VMP1-202ENST00000585847 TMEM200AQ86VY9 491 aa10.81□□□□□ -0.68
VMP1-202ENST00000585847 ZNF573Q86YE8 665 aa10.81□□□□□ -0.68
VMP1-202ENST00000585847 ZNF101Q8IZC7 436 aa10.81□□□□□ -0.68
VMP1-202ENST00000585847 OR56B2PQ8NGI1 322 aa10.81□□□□□ -0.68
VMP1-202ENST00000585847 SLC25A28Q96A46 364 aa10.81□□□□□ -0.68
VMP1-202ENST00000585847 MICU1Q9BPX6 476 aa10.81□□□□□ -0.68
VMP1-202ENST00000585847 URM1Q9BTM9 101 aaKnown RBP10.81□□□□□ -0.68
VMP1-202ENST00000585847 PAPOLGQ9BWT3 736 aaKnown RBP10.81□□□□□ -0.68
VMP1-202ENST00000585847 POFUT1Q9H488 388 aa10.81□□□□□ -0.68
VMP1-202ENST00000585847 NKIRAS2Q9NYR9 191 aa10.81□□□□□ -0.68
VMP1-202ENST00000585847 EXTL2Q9UBQ6 330 aa10.81□□□□□ -0.68
VMP1-202ENST00000585847 OR5V1Q9UGF6 321 aa10.81□□□□□ -0.68
VMP1-202ENST00000585847 GPR160Q9UJ42 338 aa10.81□□□□□ -0.68
VMP1-202ENST00000585847 STARD10Q9Y365 291 aa10.81□□□□□ -0.68
VMP1-202ENST00000585847 MED13LQ71F56 2210 aa10.81□□□□□ -0.68
VMP1-202ENST00000585847 A0A1B0GWJ7 208 aa10.8□□□□□ -0.68
VMP1-202ENST00000585847 LDLRAD4O15165 306 aa10.8□□□□□ -0.68
VMP1-202ENST00000585847 NGFP01138 241 aa10.8□□□□□ -0.68
VMP1-202ENST00000585847 ELK1P19419 428 aa10.8□□□□□ -0.68
VMP1-202ENST00000585847 PTGFRP43088 359 aa10.8□□□□□ -0.68
VMP1-202ENST00000585847 MAGEB1P43366 347 aa10.8□□□□□ -0.68
VMP1-202ENST00000585847 MMP15P51511 669 aa10.8□□□□□ -0.68
VMP1-202ENST00000585847 MTCP1P56278 107 aa10.8□□□□□ -0.68
VMP1-202ENST00000585847 AP3S2P59780 193 aa10.8□□□□□ -0.68
VMP1-202ENST00000585847 ERVS71-1P61550 626 aa10.8□□□□□ -0.68
VMP1-202ENST00000585847 SCN1BQ07699 218 aa10.8□□□□□ -0.68
VMP1-202ENST00000585847 ZNF672Q499Z4 452 aaPredicted RBP10.8□□□□□ -0.68
VMP1-202ENST00000585847 AWAT2Q6E213 333 aa10.8□□□□□ -0.68
VMP1-202ENST00000585847 OR52N4Q8NGI2 321 aa10.8□□□□□ -0.68
VMP1-202ENST00000585847 OR51A2Q8NGJ7 313 aa10.8□□□□□ -0.68
VMP1-202ENST00000585847 OR1J1Q8NGS3 322 aa10.8□□□□□ -0.68
VMP1-202ENST00000585847 RTL8AQ9BWD3 113 aa10.8□□□□□ -0.68
VMP1-202ENST00000585847 SRRQ9GZT4 340 aa10.8□□□□□ -0.68
VMP1-202ENST00000585847 PPP1R3EQ9H7J1 279 aa10.8□□□□□ -0.68
VMP1-202ENST00000585847 ZNF442Q9H7R0 627 aa10.8□□□□□ -0.68
VMP1-202ENST00000585847 SCPEP1Q9HB40 452 aa10.8□□□□□ -0.68
VMP1-202ENST00000585847 PTTG3PQ9NZH4 202 aa10.8□□□□□ -0.68
VMP1-202ENST00000585847 MRPS28Q9Y2Q9 187 aaKnown RBP10.8□□□□□ -0.68
VMP1-202ENST00000585847 DSCAMO60469 2012 aa10.8□□□□□ -0.68
VMP1-202ENST00000585847 ARFGEF3Q5TH69 2177 aa10.79□□□□□ -0.68
VMP1-202ENST00000585847 IGKV1-9A0A0C4DH69 117 aa10.79□□□□□ -0.68
VMP1-202ENST00000585847 SMIM30A4D0T7 59 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms