RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 LOC100289279A0A1B0GTE1 492 aa11.7□□□□□ -0.54
TRAF4-215ENST00000584944 CDIPTO14735 213 aa11.7□□□□□ -0.54
TRAF4-215ENST00000584944 LMX1BO60663 402 aa11.7□□□□□ -0.54
TRAF4-215ENST00000584944 CYB5R3P00387 301 aaPredicted RBP11.7□□□□□ -0.54
TRAF4-215ENST00000584944 LALBAP00709 142 aa11.7□□□□□ -0.54
TRAF4-215ENST00000584944 HAAOP46952 286 aa11.7□□□□□ -0.54
TRAF4-215ENST00000584944 RBP2P50120 134 aa11.7□□□□□ -0.54
TRAF4-215ENST00000584944 GMFBP60983 142 aa11.7□□□□□ -0.54
TRAF4-215ENST00000584944 EMX1Q04741 257 aaPredicted RBP11.7□□□□□ -0.54
TRAF4-215ENST00000584944 ZNF154Q13106 437 aa11.7□□□□□ -0.54
TRAF4-215ENST00000584944 HAGHLQ6PII5 290 aaPredicted RBP11.7□□□□□ -0.54
TRAF4-215ENST00000584944 UTS2BQ765I0 119 aa11.7□□□□□ -0.54
TRAF4-215ENST00000584944 PRIMA1Q86XR5 153 aa11.7□□□□□ -0.54
TRAF4-215ENST00000584944 SPARTQ8N0X7 666 aa11.7□□□□□ -0.54
TRAF4-215ENST00000584944 SPICQ8N5J4 248 aa11.7□□□□□ -0.54
TRAF4-215ENST00000584944 SCCPDHQ8NBX0 429 aa11.7□□□□□ -0.54
TRAF4-215ENST00000584944 ZNF485Q8NCK3 441 aa11.7□□□□□ -0.54
TRAF4-215ENST00000584944 LRRC29Q8WV35 223 aa11.7□□□□□ -0.54
TRAF4-215ENST00000584944 RPL3LQ92901 407 aaKnown RBP11.7□□□□□ -0.54
TRAF4-215ENST00000584944 RNF166Q96A37 237 aaPredicted RBP11.7□□□□□ -0.54
TRAF4-215ENST00000584944 SPSB1Q96BD6 273 aa11.7□□□□□ -0.54
TRAF4-215ENST00000584944 OR14A2Q96R54 314 aa11.7□□□□□ -0.54
TRAF4-215ENST00000584944 SLITRK2Q9H156 845 aa11.7□□□□□ -0.54
TRAF4-215ENST00000584944 PPP1R3EQ9H7J1 279 aa11.7□□□□□ -0.54
TRAF4-215ENST00000584944 ISYNA1Q9NPH2 558 aa11.7□□□□□ -0.54
TRAF4-215ENST00000584944 ACOT13Q9NPJ3 140 aa11.7□□□□□ -0.54
TRAF4-215ENST00000584944 NPTNQ9Y639 398 aa11.7□□□□□ -0.54
TRAF4-215ENST00000584944 SIRT4Q9Y6E7 314 aaPredicted RBP11.7□□□□□ -0.54
TRAF4-215ENST00000584944 PPIAL4EA0A075B759 164 aa11.69□□□□□ -0.54
TRAF4-215ENST00000584944 ZNF879B4DU55 563 aa11.69□□□□□ -0.54
TRAF4-215ENST00000584944 PPIAL4DF5H284 164 aa11.69□□□□□ -0.54
TRAF4-215ENST00000584944 TMEM178BH3BS89 294 aa11.69□□□□□ -0.54
TRAF4-215ENST00000584944 SULT1B1O43704 296 aa11.69□□□□□ -0.54
TRAF4-215ENST00000584944 RP2O75695 350 aa11.69□□□□□ -0.54
TRAF4-215ENST00000584944 PLATP00750 562 aa11.69□□□□□ -0.54
TRAF4-215ENST00000584944 CD1AP06126 327 aa11.69□□□□□ -0.54
TRAF4-215ENST00000584944 PPIAL4FP0DN26 164 aa11.69□□□□□ -0.54
TRAF4-215ENST00000584944 ATF1P18846 271 aa11.69□□□□□ -0.54
TRAF4-215ENST00000584944 AZGP1P25311 298 aaKnown RBP11.69□□□□□ -0.54
TRAF4-215ENST00000584944 THBS2P35442 1172 aa11.69□□□□□ -0.54
TRAF4-215ENST00000584944 MDH2P40926 338 aaKnown RBP11.69□□□□□ -0.54
TRAF4-215ENST00000584944 BTG1P62324 171 aa11.69□□□□□ -0.54
TRAF4-215ENST00000584944 RIN1Q13671 783 aa11.69□□□□□ -0.54
TRAF4-215ENST00000584944 NEDD8Q15843 81 aa11.69□□□□□ -0.54
TRAF4-215ENST00000584944 ZNF181Q2M3W8 571 aa11.69□□□□□ -0.54
TRAF4-215ENST00000584944 SPRNQ5BIV9 151 aa11.69□□□□□ -0.54
TRAF4-215ENST00000584944 ARMCX4Q5H9R4 360 aa11.69□□□□□ -0.54
TRAF4-215ENST00000584944 TMEM42Q69YG0 159 aa11.69□□□□□ -0.54
TRAF4-215ENST00000584944 Q6ZSR3 168 aa11.69□□□□□ -0.54
TRAF4-215ENST00000584944 LHFPL2Q6ZUX7 228 aa11.69□□□□□ -0.54
TRAF4-215ENST00000584944 SATL1Q86VE3 508 aa11.69□□□□□ -0.54
TRAF4-215ENST00000584944 PARP16Q8N5Y8 322 aa11.69□□□□□ -0.54
TRAF4-215ENST00000584944 PNLDC1Q8NA58 520 aaKnown RBP11.69□□□□□ -0.54
TRAF4-215ENST00000584944 Q8TCH9 128 aa11.69□□□□□ -0.54
TRAF4-215ENST00000584944 HPSE2Q8WWQ2 592 aa11.69□□□□□ -0.54
TRAF4-215ENST00000584944 TMEM203Q969S6 136 aa11.69□□□□□ -0.54
TRAF4-215ENST00000584944 RAB39BQ96DA2 213 aa11.69□□□□□ -0.54
TRAF4-215ENST00000584944 OPALINQ96PE5 141 aa11.69□□□□□ -0.54
TRAF4-215ENST00000584944 S100A13Q99584 98 aa11.69□□□□□ -0.54
TRAF4-215ENST00000584944 LSM2Q9Y333 95 aaKnown RBP11.69□□□□□ -0.54
TRAF4-215ENST00000584944 WIPI2Q9Y4P8 454 aa11.69□□□□□ -0.54
TRAF4-215ENST00000584944 PPIAL4AQ9Y536 164 aa11.69□□□□□ -0.54
TRAF4-215ENST00000584944 ANK3Q12955 4377 aaKnown RBP11.69□□□□□ -0.54
TRAF4-215ENST00000584944 TRAV38-1A0A0B4J264 116 aa11.68□□□□□ -0.54
TRAF4-215ENST00000584944 PQLC2LA1A4F0 135 aa11.68□□□□□ -0.54
TRAF4-215ENST00000584944 J3QT63 122 aa11.68□□□□□ -0.54
TRAF4-215ENST00000584944 POU3F4P49335 361 aa11.68□□□□□ -0.54
TRAF4-215ENST00000584944 UBE2V2Q15819 145 aa11.68□□□□□ -0.54
TRAF4-215ENST00000584944 MICBQ29980 383 aa11.68□□□□□ -0.54
TRAF4-215ENST00000584944 FIP1L1Q6UN15 594 aaKnown RBP11.68□□□□□ -0.54
TRAF4-215ENST00000584944 ZNF826PQ6ZT77 177 aa11.68□□□□□ -0.54
TRAF4-215ENST00000584944 NLRC3Q7RTR2 1065 aa11.68□□□□□ -0.54
TRAF4-215ENST00000584944 DNAAF1Q8NEP3 725 aa11.68□□□□□ -0.54
TRAF4-215ENST00000584944 DEFB108BQ8NET1 73 aa11.68□□□□□ -0.54
TRAF4-215ENST00000584944 OR13C5Q8NGS8 318 aa11.68□□□□□ -0.54
TRAF4-215ENST00000584944 NR1H4Q96RI1 486 aaPredicted RBP11.68□□□□□ -0.54
TRAF4-215ENST00000584944 TCF7L1Q9HCS4 588 aa11.68□□□□□ -0.54
TRAF4-215ENST00000584944 TAS2R4Q9NYW5 299 aa11.68□□□□□ -0.54
TRAF4-215ENST00000584944 A0A1W2PPK0 400 aa11.67□□□□□ -0.54
TRAF4-215ENST00000584944 KIAA1324LA8MWY0 1029 aaPredicted RBP11.67□□□□□ -0.54
TRAF4-215ENST00000584944 C3orf80F5H4A9 247 aa11.67□□□□□ -0.54
TRAF4-215ENST00000584944 ARL6IP5O75915 188 aa11.67□□□□□ -0.54
TRAF4-215ENST00000584944 RGS9O75916 674 aaPredicted RBP11.67□□□□□ -0.54
TRAF4-215ENST00000584944 NXPH2O95156 264 aa11.67□□□□□ -0.54
TRAF4-215ENST00000584944 ZNF205O95201 554 aa11.67□□□□□ -0.54
TRAF4-215ENST00000584944 PTBP3O95758 552 aaKnown RBP11.67□□□□□ -0.54
TRAF4-215ENST00000584944 CPEP16870 476 aa11.67□□□□□ -0.54
TRAF4-215ENST00000584944 GLRA1P23415 457 aa11.67□□□□□ -0.54
TRAF4-215ENST00000584944 TGFBR2P37173 567 aa11.67□□□□□ -0.54
TRAF4-215ENST00000584944 TPBGQ13641 420 aa11.67□□□□□ -0.54
TRAF4-215ENST00000584944 ACSM3Q53FZ2 586 aa11.67□□□□□ -0.54
TRAF4-215ENST00000584944 SFRP4Q6FHJ7 346 aaPredicted RBP11.67□□□□□ -0.54
TRAF4-215ENST00000584944 WDR82Q6UXN9 313 aa11.67□□□□□ -0.54
TRAF4-215ENST00000584944 DNM1P46Q6ZS02 220 aa11.67□□□□□ -0.54
TRAF4-215ENST00000584944 KRT74Q7RTS7 529 aa11.67□□□□□ -0.54
TRAF4-215ENST00000584944 CEACAM19Q7Z692 300 aa11.67□□□□□ -0.54
TRAF4-215ENST00000584944 MKXQ8IYA7 352 aa11.67□□□□□ -0.54
TRAF4-215ENST00000584944 RPS4Y2Q8TD47 263 aa11.67□□□□□ -0.54
TRAF4-215ENST00000584944 RGP1Q92546 391 aaPredicted RBP11.67□□□□□ -0.54
TRAF4-215ENST00000584944 TMIGD2Q96BF3 282 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms