RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 MELTFP08582 738 aa9.15□□□□□ -0.94
CCDC47-206ENST00000584112 MRPL3P09001 348 aaKnown RBP9.15□□□□□ -0.94
CCDC47-206ENST00000584112 TGM4P49221 684 aa9.15□□□□□ -0.94
CCDC47-206ENST00000584112 DAPP51397 102 aa9.15□□□□□ -0.94
CCDC47-206ENST00000584112 GPM6AP51674 278 aa9.15□□□□□ -0.94
CCDC47-206ENST00000584112 HCCSP53701 268 aa9.15□□□□□ -0.94
CCDC47-206ENST00000584112 RPL15P61313 204 aaKnown RBP9.15□□□□□ -0.94
CCDC47-206ENST00000584112 GNG3P63215 75 aa9.15□□□□□ -0.94
CCDC47-206ENST00000584112 ROM1Q03395 351 aa9.15□□□□□ -0.94
CCDC47-206ENST00000584112 RIPPLY1Q0D2K3 151 aa9.15□□□□□ -0.94
CCDC47-206ENST00000584112 IKZF1Q13422 519 aa9.15□□□□□ -0.94
CCDC47-206ENST00000584112 PTGES3Q15185 160 aaKnown RBP9.15□□□□□ -0.94
CCDC47-206ENST00000584112 ZBTB37Q5TC79 503 aa9.15□□□□□ -0.94
CCDC47-206ENST00000584112 OLFML2AQ68BL7 652 aa9.15□□□□□ -0.94
CCDC47-206ENST00000584112 KRT74Q7RTS7 529 aa9.15□□□□□ -0.94
CCDC47-206ENST00000584112 VMO1Q7Z5L0 202 aa9.15□□□□□ -0.94
CCDC47-206ENST00000584112 THAP5Q7Z6K1 395 aa9.15□□□□□ -0.94
CCDC47-206ENST00000584112 FAM216BQ8N7L0 139 aa9.15□□□□□ -0.94
CCDC47-206ENST00000584112 LY6G5BQ8NDX9 201 aa9.15□□□□□ -0.94
CCDC47-206ENST00000584112 OR4F5Q8NH21 305 aa9.15□□□□□ -0.94
CCDC47-206ENST00000584112 HPSE2Q8WWQ2 592 aa9.15□□□□□ -0.94
CCDC47-206ENST00000584112 UTP4Q969X6 686 aaKnown RBP9.15□□□□□ -0.94
CCDC47-206ENST00000584112 RAB3IPQ96QF0 476 aaPredicted RBP9.15□□□□□ -0.94
CCDC47-206ENST00000584112 OR8B4Q96RC9 309 aa9.15□□□□□ -0.94
CCDC47-206ENST00000584112 CADM1Q9BY67 442 aaKnown RBP9.15□□□□□ -0.94
CCDC47-206ENST00000584112 PBOV1Q9GZY1 135 aa9.15□□□□□ -0.94
CCDC47-206ENST00000584112 MOB1AQ9H8S9 216 aa9.15□□□□□ -0.94
CCDC47-206ENST00000584112 FAM206AQ9NX38 181 aa9.15□□□□□ -0.94
CCDC47-206ENST00000584112 FAM53CQ9NYF3 392 aa9.15□□□□□ -0.94
CCDC47-206ENST00000584112 ONECUT1Q9UBC0 465 aa9.15□□□□□ -0.94
CCDC47-206ENST00000584112 IKZF2Q9UKS7 526 aa9.15□□□□□ -0.94
CCDC47-206ENST00000584112 CAB39Q9Y376 341 aaPredicted RBP9.15□□□□□ -0.94
CCDC47-206ENST00000584112 STARD9Q9P2P6 4700 aa9.15□□□□□ -0.95
CCDC47-206ENST00000584112 A0A1B0GW55 424 aa9.14□□□□□ -0.95
CCDC47-206ENST00000584112 FAM181BA6NEQ2 426 aa9.14□□□□□ -0.95
CCDC47-206ENST00000584112 G3V2T6 193 aa9.14□□□□□ -0.95
CCDC47-206ENST00000584112 PSMD9O00233 223 aa9.14□□□□□ -0.95
CCDC47-206ENST00000584112 AKR7A2O43488 359 aa9.14□□□□□ -0.95
CCDC47-206ENST00000584112 PRKYO43930 277 aa9.14□□□□□ -0.95
CCDC47-206ENST00000584112 DUX4L2P0CJ85 424 aa9.14□□□□□ -0.95
CCDC47-206ENST00000584112 DUX4L3P0CJ86 424 aa9.14□□□□□ -0.95
CCDC47-206ENST00000584112 DUX4L4P0CJ87 422 aa9.14□□□□□ -0.95
CCDC47-206ENST00000584112 DUX4L5P0CJ88 424 aa9.14□□□□□ -0.95
CCDC47-206ENST00000584112 DUX4L6P0CJ89 424 aa9.14□□□□□ -0.95
CCDC47-206ENST00000584112 DUX4L7P0CJ90 424 aa9.14□□□□□ -0.95
CCDC47-206ENST00000584112 GLRA1P23415 457 aa9.14□□□□□ -0.95
CCDC47-206ENST00000584112 GMFBP60983 142 aa9.14□□□□□ -0.95
CCDC47-206ENST00000584112 GUCA2AQ02747 115 aa9.14□□□□□ -0.95
CCDC47-206ENST00000584112 ATP6AP1Q15904 470 aa9.14□□□□□ -0.95
CCDC47-206ENST00000584112 CEACAM21Q3KPI0 293 aa9.14□□□□□ -0.95
CCDC47-206ENST00000584112 DMRTC1Q5HYR2 192 aa9.14□□□□□ -0.95
CCDC47-206ENST00000584112 NXNL2Q5VZ03 156 aa9.14□□□□□ -0.95
CCDC47-206ENST00000584112 DUX4L9Q6RFH8 374 aaPredicted RBP9.14□□□□□ -0.95
CCDC47-206ENST00000584112 METAP1DQ6UB28 335 aaPredicted RBP9.14□□□□□ -0.95
CCDC47-206ENST00000584112 FIP1L1Q6UN15 594 aaKnown RBP9.14□□□□□ -0.95
CCDC47-206ENST00000584112 ZNF788Q6ZQV5 615 aa9.14□□□□□ -0.95
CCDC47-206ENST00000584112 MEPCEQ7L2J0 689 aaKnown RBP9.14□□□□□ -0.95
CCDC47-206ENST00000584112 LDLRAD3Q86YD5 345 aa9.14□□□□□ -0.95
CCDC47-206ENST00000584112 ZDHHC13Q8IUH4 622 aa9.14□□□□□ -0.95
CCDC47-206ENST00000584112 OR5T2Q8NGG2 359 aa9.14□□□□□ -0.95
CCDC47-206ENST00000584112 OR5A2Q8NGI9 324 aa9.14□□□□□ -0.95
CCDC47-206ENST00000584112 C8orf46Q8TAG6 207 aa9.14□□□□□ -0.95
CCDC47-206ENST00000584112 ZNF671Q8TAW3 534 aa9.14□□□□□ -0.95
CCDC47-206ENST00000584112 OR51E1Q8TCB6 317 aa9.14□□□□□ -0.95
CCDC47-206ENST00000584112 NPRL2Q8WTW4 380 aa9.14□□□□□ -0.95
CCDC47-206ENST00000584112 H1FXQ92522 213 aaKnown RBP9.14□□□□□ -0.95
CCDC47-206ENST00000584112 SEH1LQ96EE3 360 aa9.14□□□□□ -0.95
CCDC47-206ENST00000584112 DCTN5Q9BTE1 182 aa9.14□□□□□ -0.95
CCDC47-206ENST00000584112 CHIAQ9BZP6 476 aa9.14□□□□□ -0.95
CCDC47-206ENST00000584112 WDR13Q9H1Z4 485 aa9.14□□□□□ -0.95
CCDC47-206ENST00000584112 BEX1Q9HBH7 125 aa9.14□□□□□ -0.95
CCDC47-206ENST00000584112 GPR84Q9NQS5 396 aa9.14□□□□□ -0.95
CCDC47-206ENST00000584112 TNFRSF19Q9NS68 423 aa9.14□□□□□ -0.95
CCDC47-206ENST00000584112 SNTG1Q9NSN8 517 aa9.14□□□□□ -0.95
CCDC47-206ENST00000584112 NLKQ9UBE8 527 aa9.14□□□□□ -0.95
CCDC47-206ENST00000584112 DUX4Q9UBX2 424 aa9.14□□□□□ -0.95
CCDC47-206ENST00000584112 SLC25A10Q9UBX3 287 aaPredicted RBP9.14□□□□□ -0.95
CCDC47-206ENST00000584112 NUFIP1Q9UHK0 495 aaKnown RBP9.14□□□□□ -0.95
CCDC47-206ENST00000584112 ENPP5Q9UJA9 477 aa9.14□□□□□ -0.95
CCDC47-206ENST00000584112 UBR4Q5T4S7 5183 aa9.14□□□□□ -0.95
CCDC47-206ENST00000584112 OR2AT4A6NND4 320 aa9.13□□□□□ -0.95
CCDC47-206ENST00000584112 ZAR1LA6NP61 321 aa9.13□□□□□ -0.95
CCDC47-206ENST00000584112 ZNF732B4DXR9 585 aa9.13□□□□□ -0.95
CCDC47-206ENST00000584112 ZNF670-ZNF695F2Z2N8 137 aa9.13□□□□□ -0.95
CCDC47-206ENST00000584112 LOC110117498-PIK3R3F6TDL0 507 aa9.13□□□□□ -0.95
CCDC47-206ENST00000584112 SIGLEC5O15389 551 aa9.13□□□□□ -0.95
CCDC47-206ENST00000584112 DHRS3O75911 302 aa9.13□□□□□ -0.95
CCDC47-206ENST00000584112 ATP5HO75947 161 aa9.13□□□□□ -0.95
CCDC47-206ENST00000584112 NDUFA7O95182 113 aa9.13□□□□□ -0.95
CCDC47-206ENST00000584112 IGLV3-1P01715 115 aa9.13□□□□□ -0.95
CCDC47-206ENST00000584112 FBP1P09467 338 aa9.13□□□□□ -0.95
CCDC47-206ENST00000584112 FCGR1AP12314 374 aa9.13□□□□□ -0.95
CCDC47-206ENST00000584112 AMY2BP19961 511 aa9.13□□□□□ -0.95
CCDC47-206ENST00000584112 EEF1B2P24534 225 aaKnown RBP9.13□□□□□ -0.95
CCDC47-206ENST00000584112 FASP25445 335 aa9.13□□□□□ -0.95
CCDC47-206ENST00000584112 RAG2P55895 527 aa9.13□□□□□ -0.95
CCDC47-206ENST00000584112 CAV3P56539 151 aa9.13□□□□□ -0.95
CCDC47-206ENST00000584112 ELF3P78545 371 aaPredicted RBP9.13□□□□□ -0.95
CCDC47-206ENST00000584112 CD69Q07108 199 aa9.13□□□□□ -0.95
CCDC47-206ENST00000584112 BNIP1Q12981 228 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms