RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-231	ENST00000584063	SEBOX	Q9HB31	216 aa	Predicted RBP	10.27	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	ADAMTS9	Q9P2N4	1935 aa		10.27	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	TMEM131	Q92545	1883 aa		10.27	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063		A0A1W2PQM1	296 aa		10.26	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	NAP1L6	A6NFF2	107 aa		10.26	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	XRCC3	O43542	346 aa		10.26	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	SNAI2	O43623	268 aa		10.26	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	OR6A2	O95222	327 aa		10.26	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	DDT	P30046	118 aa		10.26	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	NR0B1	P51843	470 aa	Known RBP	10.26	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	OR7A5	Q15622	319 aa		10.26	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	ABHD17B	Q5VST6	288 aa		10.26	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	FNDC7	Q5VTL7	733 aa		10.26	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	OLFML2A	Q68BL7	652 aa		10.26	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	PDZD9	Q8IXQ8	264 aa		10.26	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	ZNF595	Q8IYB9	648 aa		10.26	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	EXD3	Q8N9H8	876 aa		10.26	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	GPR148	Q8TDV2	347 aa		10.26	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	SAP25	Q8TEE9	199 aa		10.26	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	SCARB1	Q8WTV0	552 aa		10.26	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	ASCL2	Q99929	193 aa		10.26	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	G6PC3	Q9BUM1	346 aa		10.26	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	NUDT9	Q9BW91	350 aa		10.26	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	MRPL13	Q9BYD1	178 aa	Known RBP	10.26	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	MED11	Q9P086	117 aa		10.26	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	SUSD2	Q9UGT4	822 aa		10.26	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	NOP16	Q9Y3C1	178 aa	Known RBP	10.26	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	DMXL1	Q9Y485	3027 aa		10.26	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	TCF21	O43680	179 aa		10.26	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	OR2J2	O76002	312 aa		10.26	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	TIAF1	O95411	115 aa		10.26	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	HLA-DOB	P13765	273 aa		10.26	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	ALOX5AP	P20292	161 aa		10.26	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	SDHA	P31040	664 aa		10.26	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	MAS1L	P35410	378 aa		10.26	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	IGLV3-21	P80748	117 aa	Predicted RBP	10.26	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	BIK	Q13323	160 aa		10.26	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	LANCL3	Q6ZV70	420 aa		10.26	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	RNF144B	Q7Z419	303 aa		10.26	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	BEST3	Q8N1M1	668 aa		10.26	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	SLC38A9	Q8NBW4	561 aa		10.26	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	CHST4	Q8NCG5	386 aa		10.26	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	C2CD4C	Q8TF44	421 aa		10.26	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	FAM110A	Q9BQ89	295 aa		10.26	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	ZNF471	Q9BX82	626 aa	Predicted RBP	10.26	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	APMAP	Q9HDC9	416 aa		10.26	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	PEF1	Q9UBV8	284 aa	Known RBP	10.26	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	EPHA6	Q9UF33	1036 aa		10.26	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	KIF25	Q9UIL4	384 aa		10.26	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	PPP1R3C	Q9UQK1	317 aa		10.26	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	TRAV14DV4	A0A0A6YYC5	116 aa		10.26	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	EEF1E1-BLOC1S5	C9J1V9	151 aa		10.26	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	ARPC3	O15145	178 aa		10.26	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	CPN1	P15169	458 aa		10.26	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	FBL	P22087	321 aa	Known RBP	10.26	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	EPHA4	P54764	986 aa		10.26	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	ADAM8	P78325	824 aa		10.26	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	FMOD	Q06828	376 aa		10.26	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	FBXW9	Q5XUX1	488 aa		10.26	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	CDC20B	Q86Y33	519 aa		10.26	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	GABRG1	Q8N1C3	465 aa		10.26	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	BVES	Q8NE79	360 aa		10.26	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	OR1J4	Q8NGS1	313 aa		10.26	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	MRPS24	Q96EL2	167 aa	Known RBP	10.26	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	C13orf42	A0A1B0GVH6	325 aa		10.25	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	SHISA8	B8ZZ34	492 aa		10.25	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	SCD	O00767	359 aa		10.25	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	ZNF264	O43296	627 aa		10.25	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	CA11	O75493	328 aa		10.25	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	CD5	P06127	495 aa		10.25	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	AKAIN1	P0CW23	69 aa		10.25	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	RAB11B	Q15907	218 aa		10.25	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	NHLRC2	Q8NBF2	726 aa		10.25	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	LCOR	Q96JN0	433 aa	Predicted RBP	10.25	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	CMSS1	Q9BQ75	279 aa	Known RBP	10.25	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	DUSP23	Q9BVJ7	150 aa		10.25	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	TMEM231	Q9H6L2	316 aa		10.25	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	EMC9	Q9Y3B6	208 aa		10.25	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	FRY	Q5TBA9	3013 aa		10.25	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	HS3ST1	O14792	307 aa		10.25	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	ASAH2B	P0C7U1	165 aa		10.25	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	CTLA4	P16410	223 aa		10.25	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	RAB11A	P62491	216 aa		10.25	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	EXT1	Q16394	746 aa		10.25	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	SGCB	Q16585	318 aa		10.25	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	PABPC1L2A	Q5JQF8	200 aa		10.25	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	LY6G6F	Q5SQ64	297 aa		10.25	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	ANKRD16	Q6P6B7	361 aa		10.25	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	C9orf40	Q8IXQ3	194 aa		10.25	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	ST6GALNAC3	Q8NDV1	305 aa		10.25	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	TMEM185A	Q8NFB2	350 aa		10.25	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	NUDCD2	Q8WVJ2	157 aa		10.25	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	LRRC46	Q96FV0	321 aa		10.25	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	C4orf45	Q96LM5	186 aa		10.25	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	UBQLN4	Q9NRR5	601 aa		10.25	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063		M0QXV9	152 aa		10.24	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	DNASE2	O00115	360 aa	Predicted RBP	10.24	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	XKRY	O14609	159 aa		10.24	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	IFNA10	P01566	189 aa		10.24	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	HLA-A	P01891	365 aa	Known RBP	10.24	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms