RNA–Protein interactions for RNA: ENST00000583441.1

SMCHD1-209, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 657 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-209ENST00000583441 FARSAQ9Y285 508 aaKnown RBP2.09□□□□□ -2.07
SMCHD1-209ENST00000583441 DOCK9Q9BZ29 2069 aa2.08□□□□□ -2.08
SMCHD1-209ENST00000583441 CCL15-CCL14A0A0B4J2E2 113 aa2.08□□□□□ -2.08
SMCHD1-209ENST00000583441 ANKRD20A5PA0PJZ0 165 aa2.08□□□□□ -2.08
SMCHD1-209ENST00000583441 A8MUU9 505 aa2.08□□□□□ -2.08
SMCHD1-209ENST00000583441 NDUFS8O00217 210 aa2.08□□□□□ -2.08
SMCHD1-209ENST00000583441 POLR1CO15160 346 aaPredicted RBP2.08□□□□□ -2.08
SMCHD1-209ENST00000583441 TCAPO15273 167 aa2.08□□□□□ -2.08
SMCHD1-209ENST00000583441 GMDSO60547 372 aa2.08□□□□□ -2.08
SMCHD1-209ENST00000583441 LHBP01229 141 aa2.08□□□□□ -2.08
SMCHD1-209ENST00000583441 IGLV2-8P01709 118 aa2.08□□□□□ -2.08
SMCHD1-209ENST00000583441 IGLV3-19P01714 112 aa2.08□□□□□ -2.08
SMCHD1-209ENST00000583441 CCDC172P0C7W6 258 aa2.08□□□□□ -2.08
SMCHD1-209ENST00000583441 BGNP21810 368 aa2.08□□□□□ -2.08
SMCHD1-209ENST00000583441 RPL31P62899 125 aaKnown RBP2.08□□□□□ -2.08
SMCHD1-209ENST00000583441 MAD2L1BPQ15013 274 aaPredicted RBP2.08□□□□□ -2.08
SMCHD1-209ENST00000583441 CCL15Q16663 113 aa2.08□□□□□ -2.08
SMCHD1-209ENST00000583441 IDNKQ5T6J7 187 aa2.08□□□□□ -2.08
SMCHD1-209ENST00000583441 KDM4DQ6B0I6 523 aa2.08□□□□□ -2.08
SMCHD1-209ENST00000583441 SPINT4Q6UDR6 99 aa2.08□□□□□ -2.08
SMCHD1-209ENST00000583441 NT5DC3Q86UY8 548 aa2.08□□□□□ -2.08
SMCHD1-209ENST00000583441 CA13Q8N1Q1 262 aa2.08□□□□□ -2.08
SMCHD1-209ENST00000583441 CYB561A3Q8NBI2 242 aa2.08□□□□□ -2.08
SMCHD1-209ENST00000583441 OR52N1Q8NH53 320 aa2.08□□□□□ -2.08
SMCHD1-209ENST00000583441 NT5CQ8TCD5 201 aa2.08□□□□□ -2.08
SMCHD1-209ENST00000583441 GLT1D1Q96MS3 346 aa2.08□□□□□ -2.08
SMCHD1-209ENST00000583441 C18orf15Q96N68 181 aa2.08□□□□□ -2.08
SMCHD1-209ENST00000583441 MAP1LC3CQ9BXW4 147 aa2.08□□□□□ -2.08
SMCHD1-209ENST00000583441 COA1Q9GZY4 146 aa2.08□□□□□ -2.08
SMCHD1-209ENST00000583441 TAS2R5Q9NYW4 299 aa2.08□□□□□ -2.08
SMCHD1-209ENST00000583441 MARCOQ9UEW3 520 aaPredicted RBP2.08□□□□□ -2.08
SMCHD1-209ENST00000583441 AP3M1Q9Y2T2 418 aa2.08□□□□□ -2.08
SMCHD1-209ENST00000583441 V9GYY9 64 aa2.08□□□□□ -2.08
SMCHD1-209ENST00000583441 A0A0G2JMP0 313 aa2.07□□□□□ -2.08
SMCHD1-209ENST00000583441 A0A0X1KG70 313 aa2.07□□□□□ -2.08
SMCHD1-209ENST00000583441 J3QT63 122 aa2.07□□□□□ -2.08
SMCHD1-209ENST00000583441 RFXANKO14593 260 aa2.07□□□□□ -2.08
SMCHD1-209ENST00000583441 VAPBO95292 243 aa2.07□□□□□ -2.08
SMCHD1-209ENST00000583441 PTTG1O95997 202 aa2.07□□□□□ -2.08
SMCHD1-209ENST00000583441 IVLP07476 585 aa2.07□□□□□ -2.08
SMCHD1-209ENST00000583441 SNRPAP09012 282 aaKnown RBP2.07□□□□□ -2.08
SMCHD1-209ENST00000583441 ZNF14P17017 642 aaPredicted RBP2.07□□□□□ -2.08
SMCHD1-209ENST00000583441 HLA-GP17693 338 aa2.07□□□□□ -2.08
SMCHD1-209ENST00000583441 IL3RAP26951 378 aa2.07□□□□□ -2.08
SMCHD1-209ENST00000583441 HTR2CP28335 458 aa2.07□□□□□ -2.08
SMCHD1-209ENST00000583441 DEKP35659 375 aaKnown RBP2.07□□□□□ -2.08
SMCHD1-209ENST00000583441 HTR2BP41595 481 aa2.07□□□□□ -2.08
SMCHD1-209ENST00000583441 IDH2P48735 452 aaKnown RBP2.07□□□□□ -2.08
SMCHD1-209ENST00000583441 KLHL12Q53G59 568 aa2.07□□□□□ -2.08
SMCHD1-209ENST00000583441 FAM27D1Q5T7N8 215 aa2.07□□□□□ -2.08
SMCHD1-209ENST00000583441 SYT6Q5T7P8 510 aaPredicted RBP2.07□□□□□ -2.08
SMCHD1-209ENST00000583441 CASP12Q6UXS9 341 aa2.07□□□□□ -2.08
SMCHD1-209ENST00000583441 PID1Q7Z2X4 250 aa2.07□□□□□ -2.08
SMCHD1-209ENST00000583441 SLC26A10Q8NG04 563 aa2.07□□□□□ -2.08
SMCHD1-209ENST00000583441 KLF14Q8TD94 323 aaPredicted RBP2.07□□□□□ -2.08
SMCHD1-209ENST00000583441 DOK4Q8TEW6 326 aa2.07□□□□□ -2.08
SMCHD1-209ENST00000583441 LRRC39Q96DD0 335 aa2.07□□□□□ -2.08
SMCHD1-209ENST00000583441 GPR82Q96P67 336 aa2.07□□□□□ -2.08
SMCHD1-209ENST00000583441 GABRG3Q99928 467 aa2.07□□□□□ -2.08
SMCHD1-209ENST00000583441 SCRT1Q9BWW7 348 aa2.07□□□□□ -2.08
SMCHD1-209ENST00000583441 ING2Q9H160 280 aa2.07□□□□□ -2.08
SMCHD1-209ENST00000583441 SYT4Q9H2B2 425 aa2.07□□□□□ -2.08
SMCHD1-209ENST00000583441 XKR8Q9H6D3 395 aa2.07□□□□□ -2.08
SMCHD1-209ENST00000583441 ANKHQ9HCJ1 492 aa2.07□□□□□ -2.08
SMCHD1-209ENST00000583441 TMEM100Q9NV29 134 aa2.07□□□□□ -2.08
SMCHD1-209ENST00000583441 IL37Q9NZH6 218 aa2.07□□□□□ -2.08
SMCHD1-209ENST00000583441 VAPAQ9P0L0 249 aa2.07□□□□□ -2.08
SMCHD1-209ENST00000583441 PPIL1Q9Y3C6 166 aa2.07□□□□□ -2.08
SMCHD1-209ENST00000583441 ENPP4Q9Y6X5 453 aa2.07□□□□□ -2.08
SMCHD1-209ENST00000583441 ZNF608Q9ULD9 1512 aaPredicted RBP2.07□□□□□ -2.08
SMCHD1-209ENST00000583441 TRAV8-7A0A075B6U6 113 aa2.06□□□□□ -2.08
SMCHD1-209ENST00000583441 IGHV3OR16-8A0A075B7F1 116 aa2.06□□□□□ -2.08
SMCHD1-209ENST00000583441 FAM240AA0A1B0GVK7 77 aa2.06□□□□□ -2.08
SMCHD1-209ENST00000583441 TMEM72A0PK05 275 aa2.06□□□□□ -2.08
SMCHD1-209ENST00000583441 GOLGA6L4A6NEF3 574 aa2.06□□□□□ -2.08
SMCHD1-209ENST00000583441 ZNF98A6NK75 572 aa2.06□□□□□ -2.08
SMCHD1-209ENST00000583441 PRAMEF26H0Y7S4 382 aa2.06□□□□□ -2.08
SMCHD1-209ENST00000583441 M0R1B8 84 aa2.06□□□□□ -2.08
SMCHD1-209ENST00000583441 OR4Q2P0C623 313 aa2.06□□□□□ -2.08
SMCHD1-209ENST00000583441 NTF3P20783 257 aa2.06□□□□□ -2.08
SMCHD1-209ENST00000583441 CCNOP22674 350 aa2.06□□□□□ -2.08
SMCHD1-209ENST00000583441 GPR4P46093 362 aa2.06□□□□□ -2.08
SMCHD1-209ENST00000583441 RGS6P49758 472 aa2.06□□□□□ -2.08
SMCHD1-209ENST00000583441 GRB2P62993 217 aaKnown RBP2.06□□□□□ -2.08
SMCHD1-209ENST00000583441 TAL2Q16559 108 aa2.06□□□□□ -2.08
SMCHD1-209ENST00000583441 FBXL19-AS1Q494R0 122 aa2.06□□□□□ -2.08
SMCHD1-209ENST00000583441 KRTAP13-2Q52LG2 175 aa2.06□□□□□ -2.08
SMCHD1-209ENST00000583441 LUZP6Q538Z0 58 aa2.06□□□□□ -2.08
SMCHD1-209ENST00000583441 TTC32Q5I0X7 151 aa2.06□□□□□ -2.08
SMCHD1-209ENST00000583441 MED27Q6P2C8 311 aa2.06□□□□□ -2.08
SMCHD1-209ENST00000583441 MORN3Q6PF18 240 aaPredicted RBP2.06□□□□□ -2.08
SMCHD1-209ENST00000583441 ST13P4Q8IZP2 240 aaPredicted RBP2.06□□□□□ -2.08
SMCHD1-209ENST00000583441 SYS1Q8N2H4 156 aa2.06□□□□□ -2.08
SMCHD1-209ENST00000583441 MIR7-3HGQ8N6C7 128 aa2.06□□□□□ -2.08
SMCHD1-209ENST00000583441 TRIML2Q8N7C3 387 aa2.06□□□□□ -2.08
SMCHD1-209ENST00000583441 OR6K2Q8NGY2 324 aa2.06□□□□□ -2.08
SMCHD1-209ENST00000583441 ORAOV1Q8WV07 137 aa2.06□□□□□ -2.08
SMCHD1-209ENST00000583441 MSANTD3Q96H12 275 aa2.06□□□□□ -2.08
SMCHD1-209ENST00000583441 OR2M4Q96R27 311 aa2.06□□□□□ -2.08
SMCHD1-209ENST00000583441 MARVELD1Q9BSK0 173 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms