RNA–Protein interactions for RNA: ENST00000583438.1

PPP4R1-225, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-225ENST00000583438 SERTAD4Q9NUC0 356 aa6.36□□□□□ -1.39
PPP4R1-225ENST00000583438 INTS9Q9NV88 658 aaKnown RBP6.36□□□□□ -1.39
PPP4R1-225ENST00000583438 COMMD3-BMI1R4GMX3 469 aa6.36□□□□□ -1.39
PPP4R1-225ENST00000583438 SACSQ9NZJ4 4579 aa6.36□□□□□ -1.39
PPP4R1-225ENST00000583438 STAB2Q8WWQ8 2551 aa6.35□□□□□ -1.39
PPP4R1-225ENST00000583438 TRAV38-1A0A0B4J264 116 aa6.35□□□□□ -1.39
PPP4R1-225ENST00000583438 hCG_38984A0A1B0GV85 526 aa6.35□□□□□ -1.39
PPP4R1-225ENST00000583438 HTR3EA5X5Y0 456 aa6.35□□□□□ -1.39
PPP4R1-225ENST00000583438 A6NLC8 198 aa6.35□□□□□ -1.39
PPP4R1-225ENST00000583438 TRIAP1O43715 76 aa6.35□□□□□ -1.39
PPP4R1-225ENST00000583438 GYPBP06028 91 aa6.35□□□□□ -1.39
PPP4R1-225ENST00000583438 LIPFP07098 398 aa6.35□□□□□ -1.39
PPP4R1-225ENST00000583438 H1F0P07305 194 aaKnown RBP6.35□□□□□ -1.39
PPP4R1-225ENST00000583438 IRF2P14316 349 aa6.35□□□□□ -1.39
PPP4R1-225ENST00000583438 DCTDP32321 178 aa6.35□□□□□ -1.39
PPP4R1-225ENST00000583438 GUCA1AP43080 201 aaPredicted RBP6.35□□□□□ -1.39
PPP4R1-225ENST00000583438 GSSP48637 474 aa6.35□□□□□ -1.39
PPP4R1-225ENST00000583438 PRKXP51817 358 aa6.35□□□□□ -1.39
PPP4R1-225ENST00000583438 KRTAP10-11P60412 298 aa6.35□□□□□ -1.39
PPP4R1-225ENST00000583438 FAM3AP98173 230 aa6.35□□□□□ -1.39
PPP4R1-225ENST00000583438 FAM209BQ5JX69 171 aa6.35□□□□□ -1.39
PPP4R1-225ENST00000583438 SMARCD3Q6STE5 483 aa6.35□□□□□ -1.39
PPP4R1-225ENST00000583438 GDPGP1Q6ZNW5 385 aa6.35□□□□□ -1.39
PPP4R1-225ENST00000583438 MRPL21Q7Z2W9 205 aaKnown RBP6.35□□□□□ -1.39
PPP4R1-225ENST00000583438 OR1M1Q8NGA1 313 aa6.35□□□□□ -1.39
PPP4R1-225ENST00000583438 OR9Q1Q8NGQ5 310 aa6.35□□□□□ -1.39
PPP4R1-225ENST00000583438 SPRYD4Q8WW59 207 aaPredicted RBP6.35□□□□□ -1.39
PPP4R1-225ENST00000583438 ANKRD19PQ9H560 264 aa6.35□□□□□ -1.39
PPP4R1-225ENST00000583438 FGFR1OP2Q9NVK5 253 aa6.35□□□□□ -1.39
PPP4R1-225ENST00000583438 VNN3Q9NY84 501 aa6.35□□□□□ -1.39
PPP4R1-225ENST00000583438 MRPL15Q9P015 296 aaKnown RBP6.35□□□□□ -1.39
PPP4R1-225ENST00000583438 ZNF222Q9UK12 451 aa6.35□□□□□ -1.39
PPP4R1-225ENST00000583438 V9GYQ6 96 aa6.35□□□□□ -1.39
PPP4R1-225ENST00000583438 CSMD3Q7Z407 3707 aa6.35□□□□□ -1.39
PPP4R1-225ENST00000583438 KIAA2026Q5HYC2 2103 aa6.34□□□□□ -1.39
PPP4R1-225ENST00000583438 IGKV1D-17A0A075B6S4 117 aa6.34□□□□□ -1.39
PPP4R1-225ENST00000583438 A0A1B0GVI7 797 aa6.34□□□□□ -1.39
PPP4R1-225ENST00000583438 hCG_1807616A0A1W2PRN6 198 aa6.34□□□□□ -1.39
PPP4R1-225ENST00000583438 WI2-2373I1.2A0A1W2PRP0 233 aa6.34□□□□□ -1.39
PPP4R1-225ENST00000583438 MEIOCA2RUB1 952 aa6.34□□□□□ -1.39
PPP4R1-225ENST00000583438 BHLHE40O14503 412 aa6.34□□□□□ -1.39
PPP4R1-225ENST00000583438 ARPC3O15145 178 aa6.34□□□□□ -1.39
PPP4R1-225ENST00000583438 GMDSO60547 372 aa6.34□□□□□ -1.39
PPP4R1-225ENST00000583438 RHBDL1O75783 438 aa6.34□□□□□ -1.39
PPP4R1-225ENST00000583438 ANXA2P07355 339 aaKnown RBP6.34□□□□□ -1.39
PPP4R1-225ENST00000583438 FBP1P09467 338 aa6.34□□□□□ -1.39
PPP4R1-225ENST00000583438 GABRA5P31644 462 aa6.34□□□□□ -1.39
PPP4R1-225ENST00000583438 BMXP51813 675 aa6.34□□□□□ -1.39
PPP4R1-225ENST00000583438 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.34□□□□□ -1.39
PPP4R1-225ENST00000583438 NSUN5P1Q3KNT7 163 aa6.34□□□□□ -1.39
PPP4R1-225ENST00000583438 TCTEX1D4Q5JR98 221 aa6.34□□□□□ -1.39
PPP4R1-225ENST00000583438 LINC01590Q5TEZ4 76 aa6.34□□□□□ -1.39
PPP4R1-225ENST00000583438 METTL21CQ5VZV1 264 aa6.34□□□□□ -1.39
PPP4R1-225ENST00000583438 C10orf99Q6UWK7 81 aa6.34□□□□□ -1.39
PPP4R1-225ENST00000583438 ZNF788Q6ZQV5 615 aa6.34□□□□□ -1.39
PPP4R1-225ENST00000583438 SLC16A9Q7RTY1 509 aa6.34□□□□□ -1.39
PPP4R1-225ENST00000583438 DCXRQ7Z4W1 244 aa6.34□□□□□ -1.39
PPP4R1-225ENST00000583438 LHFPL4Q7Z7J7 247 aa6.34□□□□□ -1.39
PPP4R1-225ENST00000583438 ZDHHC21Q8IVQ6 265 aa6.34□□□□□ -1.39
PPP4R1-225ENST00000583438 OR2C3Q8N628 320 aa6.34□□□□□ -1.39
PPP4R1-225ENST00000583438 BEND2Q8NDZ0 799 aa6.34□□□□□ -1.39
PPP4R1-225ENST00000583438 OR4Q3Q8NH05 313 aa6.34□□□□□ -1.39
PPP4R1-225ENST00000583438 ANGPTL6Q8NI99 470 aa6.34□□□□□ -1.39
PPP4R1-225ENST00000583438 RPL3LQ92901 407 aaKnown RBP6.34□□□□□ -1.39
PPP4R1-225ENST00000583438 SGK3Q96BR1 496 aa6.34□□□□□ -1.39
PPP4R1-225ENST00000583438 LYZL4Q96KX0 146 aa6.34□□□□□ -1.39
PPP4R1-225ENST00000583438 BTBD10Q9BSF8 475 aa6.34□□□□□ -1.39
PPP4R1-225ENST00000583438 KRTAP4-7Q9BYR0 210 aa6.34□□□□□ -1.39
PPP4R1-225ENST00000583438 C19orf12Q9NSK7 152 aa6.34□□□□□ -1.39
PPP4R1-225ENST00000583438 TBC1D23Q9NUY8 699 aa6.34□□□□□ -1.39
PPP4R1-225ENST00000583438 TAS2R1Q9NYW7 299 aa6.34□□□□□ -1.39
PPP4R1-225ENST00000583438 TMEM5Q9Y2B1 443 aa6.34□□□□□ -1.39
PPP4R1-225ENST00000583438 RHBDD3Q9Y3P4 386 aa6.34□□□□□ -1.39
PPP4R1-225ENST00000583438 MAB21L2Q9Y586 359 aa6.34□□□□□ -1.39
PPP4R1-225ENST00000583438 CAPN7Q9Y6W3 813 aa6.34□□□□□ -1.39
PPP4R1-225ENST00000583438 TENM2Q9NT68 2774 aa6.34□□□□□ -1.4
PPP4R1-225ENST00000583438 MEX3AA1L020 520 aaKnown RBP6.33□□□□□ -1.4
PPP4R1-225ENST00000583438 GGT3PA6NGU5 568 aa6.33□□□□□ -1.4
PPP4R1-225ENST00000583438 BBIP1A8MTZ0 92 aa6.33□□□□□ -1.4
PPP4R1-225ENST00000583438 PRR32B1ATL7 298 aa6.33□□□□□ -1.4
PPP4R1-225ENST00000583438 CDIPTO14735 213 aa6.33□□□□□ -1.4
PPP4R1-225ENST00000583438 AKR7A2O43488 359 aa6.33□□□□□ -1.4
PPP4R1-225ENST00000583438 PEX14O75381 377 aa6.33□□□□□ -1.4
PPP4R1-225ENST00000583438 IFNA14P01570 189 aa6.33□□□□□ -1.4
PPP4R1-225ENST00000583438 IGLL1P15814 213 aa6.33□□□□□ -1.4
PPP4R1-225ENST00000583438 BTF3P20290 206 aaKnown RBP6.33□□□□□ -1.4
PPP4R1-225ENST00000583438 TGFBR2P37173 567 aa6.33□□□□□ -1.4
PPP4R1-225ENST00000583438 KIR2DS4P43632 304 aa6.33□□□□□ -1.4
PPP4R1-225ENST00000583438 CEBPDP49716 269 aaPredicted RBP6.33□□□□□ -1.4
PPP4R1-225ENST00000583438 RAB13P51153 203 aa6.33□□□□□ -1.4
PPP4R1-225ENST00000583438 PMS2P11Q13670 270 aa6.33□□□□□ -1.4
PPP4R1-225ENST00000583438 ATPAF1Q5TC12 328 aaPredicted RBP6.33□□□□□ -1.4
PPP4R1-225ENST00000583438 ZNF770Q6IQ21 691 aaPredicted RBP6.33□□□□□ -1.4
PPP4R1-225ENST00000583438 PGBD2Q6P3X8 592 aa6.33□□□□□ -1.4
PPP4R1-225ENST00000583438 KCTD20Q7Z5Y7 419 aa6.33□□□□□ -1.4
PPP4R1-225ENST00000583438 MKXQ8IYA7 352 aa6.33□□□□□ -1.4
PPP4R1-225ENST00000583438 RNF148Q8N7C7 305 aa6.33□□□□□ -1.4
PPP4R1-225ENST00000583438 SLC37A3Q8NCC5 494 aa6.33□□□□□ -1.4
PPP4R1-225ENST00000583438 ZNRF1Q8ND25 227 aa6.33□□□□□ -1.4
PPP4R1-225ENST00000583438 OR9Q2Q8NGE9 314 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms