RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 PYDC2Q56P42 97 aa8.81□□□□□ -1
SS18-221ENST00000582448 FBXW9Q5XUX1 488 aa8.81□□□□□ -1
SS18-221ENST00000582448 TMEM53Q6P2H8 277 aa8.81□□□□□ -1
SS18-221ENST00000582448 DRAM2Q6UX65 266 aa8.81□□□□□ -1
SS18-221ENST00000582448 STAC2Q6ZMT1 411 aa8.81□□□□□ -1
SS18-221ENST00000582448 FAM57BQ71RH2 274 aa8.81□□□□□ -1
SS18-221ENST00000582448 DOK3Q7L591 496 aa8.81□□□□□ -1
SS18-221ENST00000582448 SERPINA12Q8IW75 414 aa8.81□□□□□ -1
SS18-221ENST00000582448 NKAIN3Q8N8D7 197 aa8.81□□□□□ -1
SS18-221ENST00000582448 GDPD1Q8N9F7 314 aa8.81□□□□□ -1
SS18-221ENST00000582448 MINDY2Q8NBR6 621 aa8.81□□□□□ -1
SS18-221ENST00000582448 OR52H1Q8NGJ2 320 aa8.81□□□□□ -1
SS18-221ENST00000582448 OR1F12Q8NHA8 337 aa8.81□□□□□ -1
SS18-221ENST00000582448 HTRA1Q92743 480 aa8.81□□□□□ -1
SS18-221ENST00000582448 DVL3Q92997 716 aaPredicted RBP8.81□□□□□ -1
SS18-221ENST00000582448 FOXRED1Q96CU9 486 aaPredicted RBP8.81□□□□□ -1
SS18-221ENST00000582448 CMTM3Q96MX0 182 aa8.81□□□□□ -1
SS18-221ENST00000582448 OR10A2Q9H208 303 aa8.81□□□□□ -1
SS18-221ENST00000582448 NEK6Q9HC98 313 aa8.81□□□□□ -1
SS18-221ENST00000582448 ABCB10Q9NRK6 738 aa8.81□□□□□ -1
SS18-221ENST00000582448 SLC7A10Q9NS82 523 aa8.81□□□□□ -1
SS18-221ENST00000582448 ZNF701Q9NV72 531 aaPredicted RBP8.81□□□□□ -1
SS18-221ENST00000582448 TLN2Q9Y4G6 2542 aa8.81□□□□□ -1
SS18-221ENST00000582448 COL6A5A8TX70 2615 aa8.8□□□□□ -1
SS18-221ENST00000582448 H3BSH0 61 aa8.8□□□□□ -1
SS18-221ENST00000582448 M0R135 149 aa8.8□□□□□ -1
SS18-221ENST00000582448 HS3ST1O14792 307 aa8.8□□□□□ -1
SS18-221ENST00000582448 PIN1P1O15428 100 aa8.8□□□□□ -1
SS18-221ENST00000582448 MAGEB3O15480 346 aa8.8□□□□□ -1
SS18-221ENST00000582448 CGAP01215 116 aa8.8□□□□□ -1
SS18-221ENST00000582448 TTRP02766 147 aa8.8□□□□□ -1
SS18-221ENST00000582448 ACSM4P0C7M7 580 aa8.8□□□□□ -1
SS18-221ENST00000582448 CALCBP10092 127 aa8.8□□□□□ -1
SS18-221ENST00000582448 SLC2A2P11168 524 aaPredicted RBP8.8□□□□□ -1
SS18-221ENST00000582448 ZNF32P17041 273 aa8.8□□□□□ -1
SS18-221ENST00000582448 AGTR1P30556 359 aa8.8□□□□□ -1
SS18-221ENST00000582448 CDKN1AP38936 164 aa8.8□□□□□ -1
SS18-221ENST00000582448 OR3A2P47893 321 aa8.8□□□□□ -1
SS18-221ENST00000582448 HTR5AP47898 357 aa8.8□□□□□ -1
SS18-221ENST00000582448 EVX1P49640 407 aa8.8□□□□□ -1
SS18-221ENST00000582448 SCAND1P57086 179 aa8.8□□□□□ -1
SS18-221ENST00000582448 RAB11BQ15907 218 aa8.8□□□□□ -1
SS18-221ENST00000582448 TRIM16LQ309B1 348 aa8.8□□□□□ -1
SS18-221ENST00000582448 GFOD2Q3B7J2 385 aa8.8□□□□□ -1
SS18-221ENST00000582448 CHRFAM7AQ494W8 412 aa8.8□□□□□ -1
SS18-221ENST00000582448 CCDC92Q53HC0 331 aaPredicted RBP8.8□□□□□ -1
SS18-221ENST00000582448 UBE2NLQ5JXB2 153 aa8.8□□□□□ -1
SS18-221ENST00000582448 CNIH2Q6PI25 160 aa8.8□□□□□ -1
SS18-221ENST00000582448 PGAP1Q75T13 922 aa8.8□□□□□ -1
SS18-221ENST00000582448 ZNF611Q8N823 705 aa8.8□□□□□ -1
SS18-221ENST00000582448 OR51A4Q8NGJ6 313 aa8.8□□□□□ -1
SS18-221ENST00000582448 OR10AC1Q8NH08 325 aa8.8□□□□□ -1
SS18-221ENST00000582448 OR51E1Q8TCB6 317 aa8.8□□□□□ -1
SS18-221ENST00000582448 C15orf40Q8WUR7 153 aa8.8□□□□□ -1
SS18-221ENST00000582448 PHF21AQ96BD5 680 aa8.8□□□□□ -1
SS18-221ENST00000582448 FBXO17Q96EF6 278 aa8.8□□□□□ -1
SS18-221ENST00000582448 NEIL1Q96FI4 390 aaPredicted RBP8.8□□□□□ -1
SS18-221ENST00000582448 ZNF799Q96GE5 643 aa8.8□□□□□ -1
SS18-221ENST00000582448 OR2H1Q9GZK4 316 aa8.8□□□□□ -1
SS18-221ENST00000582448 PNRC2Q9NPJ4 139 aaKnown RBP8.8□□□□□ -1
SS18-221ENST00000582448 ZNF275Q9NSD4 429 aaPredicted RBP8.8□□□□□ -1
SS18-221ENST00000582448 EXTL2Q9UBQ6 330 aa8.8□□□□□ -1
SS18-221ENST00000582448 ATPIF1Q9UII2 106 aa8.8□□□□□ -1
SS18-221ENST00000582448 ZNF391Q9UJN7 358 aa8.8□□□□□ -1
SS18-221ENST00000582448 ETV7Q9Y603 341 aa8.8□□□□□ -1
SS18-221ENST00000582448 A0A0G2JK05 382 aa8.79□□□□□ -1
SS18-221ENST00000582448 A0A0U1RQV5 110 aa8.79□□□□□ -1
SS18-221ENST00000582448 PHF1O43189 567 aaPredicted RBP8.79□□□□□ -1
SS18-221ENST00000582448 CD5LO43866 347 aa8.79□□□□□ -1
SS18-221ENST00000582448 UBL3O95164 117 aa8.79□□□□□ -1
SS18-221ENST00000582448 PAX1P15863 534 aa8.79□□□□□ -1
SS18-221ENST00000582448 RAB3AP20336 220 aa8.79□□□□□ -1
SS18-221ENST00000582448 MPGP29372 298 aa8.79□□□□□ -1
SS18-221ENST00000582448 SCN1BQ07699 218 aa8.79□□□□□ -1
SS18-221ENST00000582448 HES5Q5TA89 166 aa8.79□□□□□ -1
SS18-221ENST00000582448 TRIQKQ629K1 86 aa8.79□□□□□ -1
SS18-221ENST00000582448 ZNF774Q6NX45 483 aa8.79□□□□□ -1
SS18-221ENST00000582448 ANKRD16Q6P6B7 361 aa8.79□□□□□ -1
SS18-221ENST00000582448 ZNF627Q7L945 461 aa8.79□□□□□ -1
SS18-221ENST00000582448 NUFIP2Q7Z417 695 aaKnown RBP8.79□□□□□ -1
SS18-221ENST00000582448 LRRTM1Q86UE6 522 aa8.79□□□□□ -1
SS18-221ENST00000582448 SKA3Q8IX90 412 aa8.79□□□□□ -1
SS18-221ENST00000582448 CCDC36Q8IYA8 594 aa8.79□□□□□ -1
SS18-221ENST00000582448 C19orf18Q8NEA5 215 aa8.79□□□□□ -1
SS18-221ENST00000582448 OR8B12Q8NGG6 310 aa8.79□□□□□ -1
SS18-221ENST00000582448 Q8TCH9 128 aa8.79□□□□□ -1
SS18-221ENST00000582448 FGGYQ96C11 551 aa8.79□□□□□ -1
SS18-221ENST00000582448 S100A16Q96FQ6 103 aaKnown RBP8.79□□□□□ -1
SS18-221ENST00000582448 KRTAP4-5Q9BYR2 181 aa8.79□□□□□ -1
SS18-221ENST00000582448 MIXL1Q9H2W2 232 aa8.79□□□□□ -1
SS18-221ENST00000582448 RGCCQ9H4X1 137 aa8.79□□□□□ -1
SS18-221ENST00000582448 GPR84Q9NQS5 396 aa8.79□□□□□ -1
SS18-221ENST00000582448 MALT1Q9UDY8 824 aa8.79□□□□□ -1
SS18-221ENST00000582448 STEAP1Q9UHE8 339 aa8.79□□□□□ -1
SS18-221ENST00000582448 SPATA2Q9UM82 520 aa8.79□□□□□ -1
SS18-221ENST00000582448 V9GYH0 126 aa8.79□□□□□ -1
SS18-221ENST00000582448 CUBNO60494 3623 aa8.78□□□□□ -1
SS18-221ENST00000582448 TRAV8-7A0A075B6U6 113 aa8.78□□□□□ -1
SS18-221ENST00000582448 A8MV72 311 aaPredicted RBP8.78□□□□□ -1
SS18-221ENST00000582448 LCATP04180 440 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms