RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 ATG5Q9H1Y0 275 aa10.79□□□□□ -0.68
SRSF1-204ENST00000581979 NDRG3Q9UGV2 375 aa10.79□□□□□ -0.68
SRSF1-204ENST00000581979 SLC7A11Q9UPY5 501 aa10.79□□□□□ -0.68
SRSF1-204ENST00000581979 IGHV1-18A0A0C4DH31 117 aa10.78□□□□□ -0.68
SRSF1-204ENST00000581979 ZNF850A8MQ14 1090 aa10.78□□□□□ -0.68
SRSF1-204ENST00000581979 IGLV1-44P01699 117 aa10.78□□□□□ -0.68
SRSF1-204ENST00000581979 CDK2P24941 298 aa10.78□□□□□ -0.68
SRSF1-204ENST00000581979 INPP1P49441 399 aa10.78□□□□□ -0.68
SRSF1-204ENST00000581979 UCP2P55851 309 aa10.78□□□□□ -0.68
SRSF1-204ENST00000581979 MTCP1P56278 107 aa10.78□□□□□ -0.68
SRSF1-204ENST00000581979 PPP1CBP62140 327 aa10.78□□□□□ -0.68
SRSF1-204ENST00000581979 SCN1BQ07699 218 aa10.78□□□□□ -0.68
SRSF1-204ENST00000581979 PPA1Q15181 289 aa10.78□□□□□ -0.68
SRSF1-204ENST00000581979 SPATA46Q5T0L3 261 aa10.78□□□□□ -0.68
SRSF1-204ENST00000581979 UNQ6126/PRO20091Q6UXV3 157 aa10.78□□□□□ -0.68
SRSF1-204ENST00000581979 FTMTQ8N4E7 242 aa10.78□□□□□ -0.68
SRSF1-204ENST00000581979 FAM169BQ8N8A8 192 aa10.78□□□□□ -0.68
SRSF1-204ENST00000581979 POC5Q8NA72 575 aa10.78□□□□□ -0.68
SRSF1-204ENST00000581979 OR5D18Q8NGL1 313 aa10.78□□□□□ -0.68
SRSF1-204ENST00000581979 OR1J1Q8NGS3 322 aa10.78□□□□□ -0.68
SRSF1-204ENST00000581979 UBASH3BQ8TF42 649 aa10.78□□□□□ -0.68
SRSF1-204ENST00000581979 BORCS8Q96FH0 119 aa10.78□□□□□ -0.68
SRSF1-204ENST00000581979 TECTBQ96PL2 329 aa10.78□□□□□ -0.68
SRSF1-204ENST00000581979 ABHD1Q96SE0 405 aa10.78□□□□□ -0.68
SRSF1-204ENST00000581979 S100A13Q99584 98 aa10.78□□□□□ -0.68
SRSF1-204ENST00000581979 GAL3ST1Q99999 423 aa10.78□□□□□ -0.68
SRSF1-204ENST00000581979 PAPOLGQ9BWT3 736 aaKnown RBP10.78□□□□□ -0.68
SRSF1-204ENST00000581979 DIABLOQ9NR28 239 aa10.78□□□□□ -0.68
SRSF1-204ENST00000581979 GPR160Q9UJ42 338 aa10.78□□□□□ -0.68
SRSF1-204ENST00000581979 ING4Q9UNL4 249 aa10.78□□□□□ -0.68
SRSF1-204ENST00000581979 PLEKHA6Q9Y2H5 1048 aa10.78□□□□□ -0.68
SRSF1-204ENST00000581979 SETD2Q9BYW2 2564 aaPredicted RBP10.78□□□□□ -0.68
SRSF1-204ENST00000581979 A0A1W2PQ09 198 aa10.78□□□□□ -0.68
SRSF1-204ENST00000581979 M0R1B8 84 aa10.78□□□□□ -0.68
SRSF1-204ENST00000581979 LDLRAD4O15165 306 aa10.78□□□□□ -0.68
SRSF1-204ENST00000581979 ICMTO60725 284 aa10.78□□□□□ -0.68
SRSF1-204ENST00000581979 UBBP0CG47 229 aa10.78□□□□□ -0.68
SRSF1-204ENST00000581979 ZNF83P51522 516 aa10.78□□□□□ -0.68
SRSF1-204ENST00000581979 PRDX4Q13162 271 aa10.78□□□□□ -0.68
SRSF1-204ENST00000581979 TAB1Q15750 504 aa10.78□□□□□ -0.68
SRSF1-204ENST00000581979 RNASE12Q5GAN4 147 aaKnown RBP10.78□□□□□ -0.68
SRSF1-204ENST00000581979 OR10K2Q6IF99 312 aa10.78□□□□□ -0.68
SRSF1-204ENST00000581979 LHFPL2Q6ZUX7 228 aa10.78□□□□□ -0.68
SRSF1-204ENST00000581979 C19orf18Q8NEA5 215 aa10.78□□□□□ -0.68
SRSF1-204ENST00000581979 TNFAIP8L1Q8WVP5 186 aa10.78□□□□□ -0.68
SRSF1-204ENST00000581979 PTX4Q96A99 478 aa10.78□□□□□ -0.68
SRSF1-204ENST00000581979 TMUB1Q9BVT8 246 aa10.78□□□□□ -0.68
SRSF1-204ENST00000581979 OCEL1Q9H607 264 aa10.78□□□□□ -0.68
SRSF1-204ENST00000581979 RAB22AQ9UL26 194 aa10.78□□□□□ -0.68
SRSF1-204ENST00000581979 LINC00854A0A1B0GVQ3 168 aa10.77□□□□□ -0.69
SRSF1-204ENST00000581979 A0A1W2PPR1 153 aa10.77□□□□□ -0.69
SRSF1-204ENST00000581979 ANKRD30BLA7E2S9 258 aa10.77□□□□□ -0.69
SRSF1-204ENST00000581979 CD300LBA8K4G0 201 aa10.77□□□□□ -0.69
SRSF1-204ENST00000581979 C16orf97H3BN30 126 aa10.77□□□□□ -0.69
SRSF1-204ENST00000581979 CST4P01036 141 aa10.77□□□□□ -0.69
SRSF1-204ENST00000581979 VSIG8P0DPA2 414 aa10.77□□□□□ -0.69
SRSF1-204ENST00000581979 ZNF35P13682 527 aa10.77□□□□□ -0.69
SRSF1-204ENST00000581979 RAB6AP20340 208 aa10.77□□□□□ -0.69
SRSF1-204ENST00000581979 RAD52P43351 418 aa10.77□□□□□ -0.69
SRSF1-204ENST00000581979 RBP2P50120 134 aa10.77□□□□□ -0.69
SRSF1-204ENST00000581979 FUT6P51993 359 aa10.77□□□□□ -0.69
SRSF1-204ENST00000581979 ATP1B3P54709 279 aa10.77□□□□□ -0.69
SRSF1-204ENST00000581979 TAS2R20P59543 309 aa10.77□□□□□ -0.69
SRSF1-204ENST00000581979 TRIM16LQ309B1 348 aa10.77□□□□□ -0.69
SRSF1-204ENST00000581979 FBXW12Q6X9E4 464 aa10.77□□□□□ -0.69
SRSF1-204ENST00000581979 TGIF2LYQ8IUE0 185 aa10.77□□□□□ -0.69
SRSF1-204ENST00000581979 CENPSQ8N2Z9 138 aa10.77□□□□□ -0.69
SRSF1-204ENST00000581979 BHLHE23Q8NDY6 225 aa10.77□□□□□ -0.69
SRSF1-204ENST00000581979 SLC25A40Q8TBP6 338 aa10.77□□□□□ -0.69
SRSF1-204ENST00000581979 C15orf40Q8WUR7 153 aa10.77□□□□□ -0.69
SRSF1-204ENST00000581979 FAM46BQ96A09 425 aa10.77□□□□□ -0.69
SRSF1-204ENST00000581979 WFIKKN1Q96NZ8 548 aa10.77□□□□□ -0.69
SRSF1-204ENST00000581979 USB1Q9BQ65 265 aaKnown RBP10.77□□□□□ -0.69
SRSF1-204ENST00000581979 THAP7Q9BT49 309 aaPredicted RBP10.77□□□□□ -0.69
SRSF1-204ENST00000581979 OR2J1Q9GZK6 312 aa10.77□□□□□ -0.69
SRSF1-204ENST00000581979 GHRLQ9UBU3 117 aa10.77□□□□□ -0.69
SRSF1-204ENST00000581979 RTTNQ86VV8 2226 aa10.77□□□□□ -0.69
SRSF1-204ENST00000581979 METTL21EPA6NDL7 271 aa10.76□□□□□ -0.69
SRSF1-204ENST00000581979 CTDSPLO15194 276 aa10.76□□□□□ -0.69
SRSF1-204ENST00000581979 XRCC3O43542 346 aa10.76□□□□□ -0.69
SRSF1-204ENST00000581979 CCKARP32238 428 aa10.76□□□□□ -0.69
SRSF1-204ENST00000581979 PTGFRP43088 359 aa10.76□□□□□ -0.69
SRSF1-204ENST00000581979 MMP15P51511 669 aa10.76□□□□□ -0.69
SRSF1-204ENST00000581979 ERVS71-1P61550 626 aa10.76□□□□□ -0.69
SRSF1-204ENST00000581979 UNC119Q13432 240 aa10.76□□□□□ -0.69
SRSF1-204ENST00000581979 C1QTNF12Q5T7M4 302 aa10.76□□□□□ -0.69
SRSF1-204ENST00000581979 OR2T2Q6IF00 324 aa10.76□□□□□ -0.69
SRSF1-204ENST00000581979 OR2W3Q7Z3T1 314 aa10.76□□□□□ -0.69
SRSF1-204ENST00000581979 ZDHHC23Q8IYP9 409 aa10.76□□□□□ -0.69
SRSF1-204ENST00000581979 SETD6Q8TBK2 473 aa10.76□□□□□ -0.69
SRSF1-204ENST00000581979 CHPT1Q8WUD6 406 aa10.76□□□□□ -0.69
SRSF1-204ENST00000581979 CMBLQ96DG6 245 aa10.76□□□□□ -0.69
SRSF1-204ENST00000581979 HIST1H2AAQ96QV6 131 aa10.76□□□□□ -0.69
SRSF1-204ENST00000581979 ELL3Q9HB65 397 aaPredicted RBP10.76□□□□□ -0.69
SRSF1-204ENST00000581979 IGHV2OR16-5A0A0B4J2B6 119 aa10.75□□□□□ -0.69
SRSF1-204ENST00000581979 TMEM14DPA8MWL7 114 aa10.75□□□□□ -0.69
SRSF1-204ENST00000581979 KDM4BO94953 1096 aa10.75□□□□□ -0.69
SRSF1-204ENST00000581979 MPIG6BO95866 241 aa10.75□□□□□ -0.69
SRSF1-204ENST00000581979 PLATP00750 562 aa10.75□□□□□ -0.69
SRSF1-204ENST00000581979 TMEM225BP0DP42 221 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms