RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 SRP9P49458 86 aaKnown RBP13.16□□□□□ -0.3
SS18-216ENST00000580751 CAPZA1P52907 286 aa13.16□□□□□ -0.3
SS18-216ENST00000580751 SCAND1P57086 179 aa13.16□□□□□ -0.3
SS18-216ENST00000580751 MZT1Q08AG7 82 aa13.16□□□□□ -0.3
SS18-216ENST00000580751 TNK1Q13470 666 aa13.16□□□□□ -0.3
SS18-216ENST00000580751 OR8G1Q15617 311 aa13.16□□□□□ -0.3
SS18-216ENST00000580751 CLVS2Q5SYC1 327 aa13.16□□□□□ -0.3
SS18-216ENST00000580751 FAM27D1Q5T7N8 215 aa13.16□□□□□ -0.3
SS18-216ENST00000580751 LRRTM1Q86UE6 522 aa13.16□□□□□ -0.3
SS18-216ENST00000580751 SPERTQ8NA61 448 aa13.16□□□□□ -0.3
SS18-216ENST00000580751 UBASH3BQ8TF42 649 aa13.16□□□□□ -0.3
SS18-216ENST00000580751 SPSB1Q96BD6 273 aa13.16□□□□□ -0.3
SS18-216ENST00000580751 ADAT3Q96EY9 351 aaPredicted RBP13.16□□□□□ -0.3
SS18-216ENST00000580751 SOX7Q9BT81 388 aa13.16□□□□□ -0.3
SS18-216ENST00000580751 SLIRPQ9GZT3 109 aaKnown RBP13.16□□□□□ -0.3
SS18-216ENST00000580751 NXF2Q9GZY0 626 aaKnown RBP13.16□□□□□ -0.3
SS18-216ENST00000580751 MMP27Q9H306 513 aa13.16□□□□□ -0.3
SS18-216ENST00000580751 PIGLQ9Y2B2 252 aa13.16□□□□□ -0.3
SS18-216ENST00000580751 MPC1Q9Y5U8 109 aa13.16□□□□□ -0.3
SS18-216ENST00000580751 FLNAP21333 2647 aaKnown RBP13.16□□□□□ -0.3
SS18-216ENST00000580751 A0A1W2PPK0 400 aa13.15□□□□□ -0.3
SS18-216ENST00000580751 SHISA3A0PJX4 238 aa13.15□□□□□ -0.3
SS18-216ENST00000580751 ANXA2P2A6NMY6 339 aa13.15□□□□□ -0.3
SS18-216ENST00000580751 PRKACBP22694 351 aa13.15□□□□□ -0.3
SS18-216ENST00000580751 BDKRB2P30411 391 aa13.15□□□□□ -0.3
SS18-216ENST00000580751 PDLIM4P50479 330 aa13.15□□□□□ -0.3
SS18-216ENST00000580751 CLEC12BQ2HXU8 276 aa13.15□□□□□ -0.3
SS18-216ENST00000580751 ZNF404Q494X3 552 aa13.15□□□□□ -0.3
SS18-216ENST00000580751 CEP78Q5JTW2 689 aa13.15□□□□□ -0.3
SS18-216ENST00000580751 GLT8D1Q68CQ7 371 aa13.15□□□□□ -0.3
SS18-216ENST00000580751 KRTAP1-3Q8IUG1 177 aa13.15□□□□□ -0.3
SS18-216ENST00000580751 ZNF525Q8N782 197 aa13.15□□□□□ -0.3
SS18-216ENST00000580751 CELF2-AS1Q8N7Q2 184 aa13.15□□□□□ -0.3
SS18-216ENST00000580751 DNAAF1Q8NEP3 725 aa13.15□□□□□ -0.3
SS18-216ENST00000580751 OR1M1Q8NGA1 313 aa13.15□□□□□ -0.3
SS18-216ENST00000580751 RDH5Q92781 318 aa13.15□□□□□ -0.3
SS18-216ENST00000580751 OR2V2Q96R30 315 aa13.15□□□□□ -0.3
SS18-216ENST00000580751 UQCC2Q9BRT2 126 aa13.15□□□□□ -0.3
SS18-216ENST00000580751 DCUN1D5Q9BTE7 237 aa13.15□□□□□ -0.3
SS18-216ENST00000580751 DLL4Q9NR61 685 aa13.15□□□□□ -0.3
SS18-216ENST00000580751 RHBDD3Q9Y3P4 386 aa13.15□□□□□ -0.3
SS18-216ENST00000580751 V9GY05 133 aa13.15□□□□□ -0.3
SS18-216ENST00000580751 TRAV8-7A0A075B6U6 113 aa13.14□□□□□ -0.31
SS18-216ENST00000580751 IGHV1-69-2A0A0G2JMI3 117 aa13.14□□□□□ -0.31
SS18-216ENST00000580751 F5H5P2 479 aa13.14□□□□□ -0.31
SS18-216ENST00000580751 H0YL77 283 aa13.14□□□□□ -0.31
SS18-216ENST00000580751 AIPO00170 330 aa13.14□□□□□ -0.31
SS18-216ENST00000580751 NDUFS8O00217 210 aa13.14□□□□□ -0.31
SS18-216ENST00000580751 MAGEB3O15480 346 aa13.14□□□□□ -0.31
SS18-216ENST00000580751 FAHP16930 419 aa13.14□□□□□ -0.31
SS18-216ENST00000580751 TGFBR1P36897 503 aa13.14□□□□□ -0.31
SS18-216ENST00000580751 CD200P41217 278 aa13.14□□□□□ -0.31
SS18-216ENST00000580751 CNN3Q15417 329 aaKnown RBP13.14□□□□□ -0.31
SS18-216ENST00000580751 ASPHD2Q6ICH7 369 aa13.14□□□□□ -0.31
SS18-216ENST00000580751 SFXN4Q6P4A7 337 aa13.14□□□□□ -0.31
SS18-216ENST00000580751 DNM1P46Q6ZS02 220 aa13.14□□□□□ -0.31
SS18-216ENST00000580751 OR8S1Q8NH09 359 aa13.14□□□□□ -0.31
SS18-216ENST00000580751 FAM168AQ92567 244 aa13.14□□□□□ -0.31
SS18-216ENST00000580751 MEGF10Q96KG7 1140 aa13.14□□□□□ -0.31
SS18-216ENST00000580751 CHODLQ9H9P2 273 aa13.14□□□□□ -0.31
SS18-216ENST00000580751 C14orf119Q9NWQ9 140 aa13.14□□□□□ -0.31
SS18-216ENST00000580751 TAS2R4Q9NYW5 299 aa13.14□□□□□ -0.31
SS18-216ENST00000580751 ABRACLQ9P1F3 81 aa13.14□□□□□ -0.31
SS18-216ENST00000580751 AKAP9Q99996 3911 aa13.13□□□□□ -0.31
SS18-216ENST00000580751 IFITM5A6NNB3 132 aa13.13□□□□□ -0.31
SS18-216ENST00000580751 CLPXO76031 633 aa13.13□□□□□ -0.31
SS18-216ENST00000580751 ATF1P18846 271 aa13.13□□□□□ -0.31
SS18-216ENST00000580751 MXD1Q05195 221 aa13.13□□□□□ -0.31
SS18-216ENST00000580751 HNRNPA0Q13151 305 aaKnown RBP13.13□□□□□ -0.31
SS18-216ENST00000580751 PRDX4Q13162 271 aa13.13□□□□□ -0.31
SS18-216ENST00000580751 RIN1Q13671 783 aa13.13□□□□□ -0.31
SS18-216ENST00000580751 CARTPTQ16568 116 aa13.13□□□□□ -0.31
SS18-216ENST00000580751 HFEQ30201 348 aa13.13□□□□□ -0.31
SS18-216ENST00000580751 MZT2AQ6P582 158 aa13.13□□□□□ -0.31
SS18-216ENST00000580751 ZDHHC23Q8IYP9 409 aa13.13□□□□□ -0.31
SS18-216ENST00000580751 MCFD2Q8NI22 146 aa13.13□□□□□ -0.31
SS18-216ENST00000580751 ITLN1Q8WWA0 313 aa13.13□□□□□ -0.31
SS18-216ENST00000580751 PIGCQ92535 297 aa13.13□□□□□ -0.31
SS18-216ENST00000580751 CMTM3Q96MX0 182 aa13.13□□□□□ -0.31
SS18-216ENST00000580751 HIST1H2AAQ96QV6 131 aa13.13□□□□□ -0.31
SS18-216ENST00000580751 MICU1Q9BPX6 476 aa13.13□□□□□ -0.31
SS18-216ENST00000580751 METTL17Q9H7H0 456 aaPredicted RBP13.13□□□□□ -0.31
SS18-216ENST00000580751 CHD3Q12873 2000 aaKnown RBP13.12□□□□□ -0.31
SS18-216ENST00000580751 A0A0G2JK05 382 aa13.12□□□□□ -0.31
SS18-216ENST00000580751 ZNF850A8MQ14 1090 aa13.12□□□□□ -0.31
SS18-216ENST00000580751 IFNL4K9M1U5 179 aa13.12□□□□□ -0.31
SS18-216ENST00000580751 CDC14BO60729 498 aa13.12□□□□□ -0.31
SS18-216ENST00000580751 NRASP01111 189 aa13.12□□□□□ -0.31
SS18-216ENST00000580751 OCMP0CE72 109 aaPredicted RBP13.12□□□□□ -0.31
SS18-216ENST00000580751 ADRA2CP18825 462 aa13.12□□□□□ -0.31
SS18-216ENST00000580751 GATA4P43694 442 aa13.12□□□□□ -0.31
SS18-216ENST00000580751 FUT6P51993 359 aa13.12□□□□□ -0.31
SS18-216ENST00000580751 C1orf100Q5SVJ3 147 aa13.12□□□□□ -0.31
SS18-216ENST00000580751 SPNS3Q6ZMD2 512 aa13.12□□□□□ -0.31
SS18-216ENST00000580751 LYPD6Q86Y78 171 aa13.12□□□□□ -0.31
SS18-216ENST00000580751 WFDC11Q8NEX6 87 aa13.12□□□□□ -0.31
SS18-216ENST00000580751 OR6M1Q8NGM8 313 aa13.12□□□□□ -0.31
SS18-216ENST00000580751 C10orf105Q8TEF2 133 aa13.12□□□□□ -0.31
SS18-216ENST00000580751 DVL3Q92997 716 aaPredicted RBP13.12□□□□□ -0.31
SS18-216ENST00000580751 ERGIC1Q969X5 290 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms