RNA–Protein interactions for RNA: ENST00000580357.1

IFT20-210, Transcript of intraflagellar transport 20, human

TSL 3

Gene IFT20, Length 752 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IFT20-210	ENST00000580357	CD80	P33681	288 aa		13.7	□□□□□ -0.22
IFT20-210	ENST00000580357	KIR3DL2	P43630	455 aa		13.7	□□□□□ -0.22
IFT20-210	ENST00000580357	TGM4	P49221	684 aa		13.7	□□□□□ -0.22
IFT20-210	ENST00000580357	FUT6	P51993	359 aa		13.7	□□□□□ -0.22
IFT20-210	ENST00000580357	SMN1	Q16637	294 aa	Known RBP	13.7	□□□□□ -0.22
IFT20-210	ENST00000580357	CCDC58	Q4VC31	144 aa		13.7	□□□□□ -0.22
IFT20-210	ENST00000580357	ATPAF1	Q5TC12	328 aa	Predicted RBP	13.7	□□□□□ -0.22
IFT20-210	ENST00000580357	WDR25	Q64LD2	544 aa	Predicted RBP	13.7	□□□□□ -0.22
IFT20-210	ENST00000580357	LYPD2	Q6UXB3	125 aa		13.7	□□□□□ -0.22
IFT20-210	ENST00000580357	ZNF841	Q6ZN19	808 aa		13.7	□□□□□ -0.22
IFT20-210	ENST00000580357	SLC36A1	Q7Z2H8	476 aa		13.7	□□□□□ -0.22
IFT20-210	ENST00000580357	ZNF676	Q8N7Q3	588 aa		13.7	□□□□□ -0.22
IFT20-210	ENST00000580357	NANP	Q8TBE9	248 aa		13.7	□□□□□ -0.22
IFT20-210	ENST00000580357	AQP3	Q92482	292 aa		13.7	□□□□□ -0.22
IFT20-210	ENST00000580357	RNF166	Q96A37	237 aa	Predicted RBP	13.7	□□□□□ -0.22
IFT20-210	ENST00000580357	TMEM80	Q96HE8	168 aa		13.7	□□□□□ -0.22
IFT20-210	ENST00000580357	MED30	Q96HR3	178 aa		13.7	□□□□□ -0.22
IFT20-210	ENST00000580357	ZNF649	Q9BS31	505 aa		13.7	□□□□□ -0.22
IFT20-210	ENST00000580357	MRI1	Q9BV20	369 aa		13.7	□□□□□ -0.22
IFT20-210	ENST00000580357	TMPRSS13	Q9BYE2	586 aa		13.7	□□□□□ -0.22
IFT20-210	ENST00000580357	COMMD4	Q9H0A8	199 aa		13.7	□□□□□ -0.22
IFT20-210	ENST00000580357	NEK6	Q9HC98	313 aa		13.7	□□□□□ -0.22
IFT20-210	ENST00000580357	PLCXD1	Q9NUJ7	323 aa		13.7	□□□□□ -0.22
IFT20-210	ENST00000580357	CNOT2	Q9NZN8	540 aa	Known RBP	13.7	□□□□□ -0.22
IFT20-210	ENST00000580357	HHLA2	Q9UM44	414 aa		13.7	□□□□□ -0.22
IFT20-210	ENST00000580357	DIMT1	Q9UNQ2	313 aa	Known RBP	13.7	□□□□□ -0.22
IFT20-210	ENST00000580357	POLDIP2	Q9Y2S7	368 aa		13.7	□□□□□ -0.22
IFT20-210	ENST00000580357	INSIG2	Q9Y5U4	225 aa		13.7	□□□□□ -0.22
IFT20-210	ENST00000580357	SON	P18583	2426 aa	Known RBP	13.69	□□□□□ -0.22
IFT20-210	ENST00000580357	LOC105371242	A0A075B767	164 aa		13.69	□□□□□ -0.22
IFT20-210	ENST00000580357	LOC107986453	A0A1B0GWG9	222 aa		13.69	□□□□□ -0.22
IFT20-210	ENST00000580357	PQLC2L	A1A4F0	135 aa		13.69	□□□□□ -0.22
IFT20-210	ENST00000580357	TMEM212	A6NML5	194 aa		13.69	□□□□□ -0.22
IFT20-210	ENST00000580357	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	13.69	□□□□□ -0.22
IFT20-210	ENST00000580357	TRAPPC2L	H3BP13	241 aa		13.69	□□□□□ -0.22
IFT20-210	ENST00000580357	GPR37	O15354	613 aa		13.69	□□□□□ -0.22
IFT20-210	ENST00000580357	PHF1	O43189	567 aa	Predicted RBP	13.69	□□□□□ -0.22
IFT20-210	ENST00000580357	ECD	O95905	644 aa	Predicted RBP	13.69	□□□□□ -0.22
IFT20-210	ENST00000580357	GYPA	P02724	150 aa		13.69	□□□□□ -0.22
IFT20-210	ENST00000580357	SEC61A1	P61619	476 aa	Known RBP	13.69	□□□□□ -0.22
IFT20-210	ENST00000580357	IL17REL	Q6ZVW7	336 aa		13.69	□□□□□ -0.22
IFT20-210	ENST00000580357	PRIMA1	Q86XR5	153 aa		13.69	□□□□□ -0.22
IFT20-210	ENST00000580357	FAM90A1	Q86YD7	464 aa		13.69	□□□□□ -0.22
IFT20-210	ENST00000580357	RDH10	Q8IZV5	341 aa		13.69	□□□□□ -0.22
IFT20-210	ENST00000580357	C19orf18	Q8NEA5	215 aa		13.69	□□□□□ -0.22
IFT20-210	ENST00000580357	ISG20L2	Q9H9L3	353 aa	Known RBP	13.69	□□□□□ -0.22
IFT20-210	ENST00000580357	GPR173	Q9NS66	373 aa		13.69	□□□□□ -0.22
IFT20-210	ENST00000580357	AUP1	Q9Y679	476 aa		13.69	□□□□□ -0.22
IFT20-210	ENST00000580357	KIR2DS1	A0A191URI9	304 aa		13.68	□□□□□ -0.22
IFT20-210	ENST00000580357	OR4C45	A6NMZ5	311 aa		13.68	□□□□□ -0.22
IFT20-210	ENST00000580357		J3QT63	122 aa		13.68	□□□□□ -0.22
IFT20-210	ENST00000580357	NOS1AP	O75052	506 aa	Predicted RBP	13.68	□□□□□ -0.22
IFT20-210	ENST00000580357	LIMS3	P0CW19	117 aa		13.68	□□□□□ -0.22
IFT20-210	ENST00000580357	LIMS4	P0CW20	117 aa		13.68	□□□□□ -0.22
IFT20-210	ENST00000580357	PPIAL4G	P0DN37	164 aa		13.68	□□□□□ -0.22
IFT20-210	ENST00000580357	PIP	P12273	146 aa	Predicted RBP	13.68	□□□□□ -0.22
IFT20-210	ENST00000580357	ZNF20	P17024	532 aa		13.68	□□□□□ -0.22
IFT20-210	ENST00000580357	PRKACB	P22694	351 aa		13.68	□□□□□ -0.22
IFT20-210	ENST00000580357	GLRA1	P23415	457 aa		13.68	□□□□□ -0.22
IFT20-210	ENST00000580357	HAAO	P46952	286 aa		13.68	□□□□□ -0.22
IFT20-210	ENST00000580357	NANOS3	P60323	173 aa	Known RBP	13.68	□□□□□ -0.22
IFT20-210	ENST00000580357	PAX8	Q06710	450 aa		13.68	□□□□□ -0.22
IFT20-210	ENST00000580357	CNN3	Q15417	329 aa	Known RBP	13.68	□□□□□ -0.22
IFT20-210	ENST00000580357	RPL22L1	Q6P5R6	122 aa	Known RBP	13.68	□□□□□ -0.22
IFT20-210	ENST00000580357	HAGHL	Q6PII5	290 aa	Predicted RBP	13.68	□□□□□ -0.22
IFT20-210	ENST00000580357	UTS2B	Q765I0	119 aa		13.68	□□□□□ -0.22
IFT20-210	ENST00000580357	C1QL2	Q7Z5L3	287 aa		13.68	□□□□□ -0.22
IFT20-210	ENST00000580357	DNAAF1	Q8NEP3	725 aa		13.68	□□□□□ -0.22
IFT20-210	ENST00000580357	OR5AK2	Q8NH90	309 aa		13.68	□□□□□ -0.22
IFT20-210	ENST00000580357	FBLIM1	Q8WUP2	373 aa		13.68	□□□□□ -0.22
IFT20-210	ENST00000580357	TMIGD2	Q96BF3	282 aa		13.68	□□□□□ -0.22
IFT20-210	ENST00000580357	DMRTB1	Q96MA1	342 aa		13.68	□□□□□ -0.22
IFT20-210	ENST00000580357	MDFI	Q99750	246 aa		13.68	□□□□□ -0.22
IFT20-210	ENST00000580357	CHST5	Q9GZS9	411 aa		13.68	□□□□□ -0.22
IFT20-210	ENST00000580357	FGF23	Q9GZV9	251 aa	Predicted RBP	13.68	□□□□□ -0.22
IFT20-210	ENST00000580357	IGHV2-70D	A0A0C4DH43	119 aa		13.67	□□□□□ -0.22
IFT20-210	ENST00000580357	TRBV2	A0A0J9YWF9	115 aa		13.67	□□□□□ -0.22
IFT20-210	ENST00000580357		A6NIN4	97 aa		13.67	□□□□□ -0.22
IFT20-210	ENST00000580357	TMPRSS2	O15393	492 aa		13.67	□□□□□ -0.22
IFT20-210	ENST00000580357	AKR7A2	O43488	359 aa		13.67	□□□□□ -0.22
IFT20-210	ENST00000580357	EGR1	P18146	543 aa		13.67	□□□□□ -0.22
IFT20-210	ENST00000580357	PAX2	Q02962	417 aa		13.67	□□□□□ -0.22
IFT20-210	ENST00000580357	ST3GAL4	Q11206	333 aa		13.67	□□□□□ -0.22
IFT20-210	ENST00000580357	RIPK1	Q13546	671 aa		13.67	□□□□□ -0.22
IFT20-210	ENST00000580357	GGH	Q92820	318 aa		13.67	□□□□□ -0.22
IFT20-210	ENST00000580357	FGGY	Q96C11	551 aa		13.67	□□□□□ -0.22
IFT20-210	ENST00000580357	PKIB	Q9C010	78 aa		13.67	□□□□□ -0.22
IFT20-210	ENST00000580357	MMP26	Q9NRE1	261 aa		13.67	□□□□□ -0.22
IFT20-210	ENST00000580357	BABAM2	Q9NXR7	383 aa		13.67	□□□□□ -0.22
IFT20-210	ENST00000580357	NLK	Q9UBE8	527 aa		13.67	□□□□□ -0.22
IFT20-210	ENST00000580357	IGHV3OR15-7	A0A075B7D8	119 aa		13.66	□□□□□ -0.22
IFT20-210	ENST00000580357	FAM230A	A0A1W2PPH8	454 aa		13.66	□□□□□ -0.22
IFT20-210	ENST00000580357	NKX6-3	A6NJ46	265 aa		13.66	□□□□□ -0.22
IFT20-210	ENST00000580357	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	13.66	□□□□□ -0.22
IFT20-210	ENST00000580357	NDUFB3	O43676	98 aa		13.66	□□□□□ -0.22
IFT20-210	ENST00000580357	ENSA	O43768	121 aa	Known RBP	13.66	□□□□□ -0.22
IFT20-210	ENST00000580357	RHBDL1	O75783	438 aa		13.66	□□□□□ -0.22
IFT20-210	ENST00000580357	GNAO1	P09471	354 aa		13.66	□□□□□ -0.22
IFT20-210	ENST00000580357	MPZ	P25189	248 aa		13.66	□□□□□ -0.22
IFT20-210	ENST00000580357	HSPA13	P48723	471 aa		13.66	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms