RNA–Protein interactions for RNA: ENST00000578985.5

IFT20-208, Transcript of intraflagellar transport 20, humanhuman

TSL 3 BASIC

Gene IFT20, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-208ENST00000578985 C19orf18Q8NEA5 215 aa12.91□□□□□ -0.34
IFT20-208ENST00000578985 DEFB108BQ8NET1 73 aa12.91□□□□□ -0.34
IFT20-208ENST00000578985 OR10Z1Q8NGY1 313 aa12.91□□□□□ -0.34
IFT20-208ENST00000578985 TRMT10AQ8TBZ6 339 aaKnown RBP12.91□□□□□ -0.34
IFT20-208ENST00000578985 GPR148Q8TDV2 347 aa12.91□□□□□ -0.34
IFT20-208ENST00000578985 NPRL2Q8WTW4 380 aa12.91□□□□□ -0.34
IFT20-208ENST00000578985 TSEN15Q8WW01 171 aaKnown RBP12.91□□□□□ -0.34
IFT20-208ENST00000578985 RGP1Q92546 391 aaPredicted RBP12.91□□□□□ -0.34
IFT20-208ENST00000578985 GHSRQ92847 366 aa12.91□□□□□ -0.34
IFT20-208ENST00000578985 DHDHQ9UQ10 334 aa12.91□□□□□ -0.34
IFT20-208ENST00000578985 LSM2Q9Y333 95 aaKnown RBP12.91□□□□□ -0.34
IFT20-208ENST00000578985 DOCK11Q5JSL3 2073 aa12.91□□□□□ -0.34
IFT20-208ENST00000578985 PNMA8CA0A1B0GUJ8 204 aa12.9□□□□□ -0.34
IFT20-208ENST00000578985 FAM230AA0A1W2PPH8 454 aa12.9□□□□□ -0.34
IFT20-208ENST00000578985 CD5LO43866 347 aa12.9□□□□□ -0.34
IFT20-208ENST00000578985 EGR1P18146 543 aa12.9□□□□□ -0.34
IFT20-208ENST00000578985 ATF1P18846 271 aa12.9□□□□□ -0.34
IFT20-208ENST00000578985 DOC2BQ14184 412 aa12.9□□□□□ -0.34
IFT20-208ENST00000578985 CNN3Q15417 329 aaKnown RBP12.9□□□□□ -0.34
IFT20-208ENST00000578985 SFRP4Q6FHJ7 346 aaPredicted RBP12.9□□□□□ -0.34
IFT20-208ENST00000578985 HAGHLQ6PII5 290 aaPredicted RBP12.9□□□□□ -0.34
IFT20-208ENST00000578985 ZNF573Q86YE8 665 aa12.9□□□□□ -0.34
IFT20-208ENST00000578985 AQP3Q92482 292 aa12.9□□□□□ -0.34
IFT20-208ENST00000578985 MSI2Q96DH6 328 aaKnown RBP12.9□□□□□ -0.34
IFT20-208ENST00000578985 C1orf159Q96HA4 380 aa12.9□□□□□ -0.34
IFT20-208ENST00000578985 OR5M11Q96RB7 305 aa12.9□□□□□ -0.34
IFT20-208ENST00000578985 TMEM246Q9BRR3 403 aa12.9□□□□□ -0.34
IFT20-208ENST00000578985 YTHDF1Q9BYJ9 559 aaKnown RBP12.9□□□□□ -0.34
IFT20-208ENST00000578985 ZCCHC4Q9H5U6 513 aa12.9□□□□□ -0.34
IFT20-208ENST00000578985 TRAV38-1A0A0B4J264 116 aa12.89□□□□□ -0.35
IFT20-208ENST00000578985 FAM157AC9JC47 383 aa12.89□□□□□ -0.35
IFT20-208ENST00000578985 C3orf80F5H4A9 247 aa12.89□□□□□ -0.35
IFT20-208ENST00000578985 J3QT63 122 aa12.89□□□□□ -0.35
IFT20-208ENST00000578985 RHBDL1O75783 438 aa12.89□□□□□ -0.35
IFT20-208ENST00000578985 ZNF16P17020 682 aaPredicted RBP12.89□□□□□ -0.35
IFT20-208ENST00000578985 CELP19835 753 aa12.89□□□□□ -0.35
IFT20-208ENST00000578985 PRKACBP22694 351 aa12.89□□□□□ -0.35
IFT20-208ENST00000578985 HAAOP46952 286 aa12.89□□□□□ -0.35
IFT20-208ENST00000578985 SOX2P48431 317 aa12.89□□□□□ -0.35
IFT20-208ENST00000578985 FUT6P51993 359 aa12.89□□□□□ -0.35
IFT20-208ENST00000578985 BDH1Q02338 343 aa12.89□□□□□ -0.35
IFT20-208ENST00000578985 ACSM1Q08AH1 577 aa12.89□□□□□ -0.35
IFT20-208ENST00000578985 MED22Q15528 200 aa12.89□□□□□ -0.35
IFT20-208ENST00000578985 KCNJ8Q15842 424 aa12.89□□□□□ -0.35
IFT20-208ENST00000578985 ZNF404Q494X3 552 aa12.89□□□□□ -0.35
IFT20-208ENST00000578985 Q71RC1 249 aaPredicted RBP12.89□□□□□ -0.35
IFT20-208ENST00000578985 SERPINA12Q8IW75 414 aa12.89□□□□□ -0.35
IFT20-208ENST00000578985 PARP16Q8N5Y8 322 aa12.89□□□□□ -0.35
IFT20-208ENST00000578985 LINC01356Q8N9X3 169 aa12.89□□□□□ -0.35
IFT20-208ENST00000578985 DNAAF1Q8NEP3 725 aa12.89□□□□□ -0.35
IFT20-208ENST00000578985 OR5D14Q8NGL3 314 aa12.89□□□□□ -0.35
IFT20-208ENST00000578985 ZNF671Q8TAW3 534 aa12.89□□□□□ -0.35
IFT20-208ENST00000578985 PGLYRP3Q96LB9 341 aa12.89□□□□□ -0.35
IFT20-208ENST00000578985 PATZ1Q9HBE1 687 aaKnown RBP12.89□□□□□ -0.35
IFT20-208ENST00000578985 TLN2Q9Y4G6 2542 aa12.89□□□□□ -0.35
IFT20-208ENST00000578985 IGHV3OR15-7A0A075B7D8 119 aa12.88□□□□□ -0.35
IFT20-208ENST00000578985 IGKV1-9A0A0C4DH69 117 aa12.88□□□□□ -0.35
IFT20-208ENST00000578985 OOEPA6NGQ2 149 aa12.88□□□□□ -0.35
IFT20-208ENST00000578985 CEACAM18A8MTB9 384 aa12.88□□□□□ -0.35
IFT20-208ENST00000578985 SRRM5B3KS81 715 aa12.88□□□□□ -0.35
IFT20-208ENST00000578985 B4DSR2 109 aa12.88□□□□□ -0.35
IFT20-208ENST00000578985 PLPP2O43688 288 aa12.88□□□□□ -0.35
IFT20-208ENST00000578985 TGFAP01135 160 aa12.88□□□□□ -0.35
IFT20-208ENST00000578985 CD1AP06126 327 aa12.88□□□□□ -0.35
IFT20-208ENST00000578985 CD2P06729 351 aa12.88□□□□□ -0.35
IFT20-208ENST00000578985 OCM2P0CE71 109 aa12.88□□□□□ -0.35
IFT20-208ENST00000578985 OCMP0CE72 109 aaPredicted RBP12.88□□□□□ -0.35
IFT20-208ENST00000578985 MAP2K4P45985 399 aa12.88□□□□□ -0.35
IFT20-208ENST00000578985 GABARAPL2P60520 117 aa12.88□□□□□ -0.35
IFT20-208ENST00000578985 GMFBP60983 142 aa12.88□□□□□ -0.35
IFT20-208ENST00000578985 YIF1BQ5BJH7 314 aa12.88□□□□□ -0.35
IFT20-208ENST00000578985 ANGPTL5Q86XS5 388 aa12.88□□□□□ -0.35
IFT20-208ENST00000578985 OR13C5Q8NGS8 318 aa12.88□□□□□ -0.35
IFT20-208ENST00000578985 OR13C9Q8NGT0 318 aa12.88□□□□□ -0.35
IFT20-208ENST00000578985 SPSB1Q96BD6 273 aa12.88□□□□□ -0.35
IFT20-208ENST00000578985 BORCS8Q96FH0 119 aa12.88□□□□□ -0.35
IFT20-208ENST00000578985 NEK6Q9HC98 313 aa12.88□□□□□ -0.35
IFT20-208ENST00000578985 YAE1D1Q9NRH1 226 aa12.88□□□□□ -0.35
IFT20-208ENST00000578985 MIOXQ9UGB7 285 aa12.88□□□□□ -0.35
IFT20-208ENST00000578985 ARHGAP32A7KAX9 2087 aa12.88□□□□□ -0.35
IFT20-208ENST00000578985 IGKV1-27A0A075B6S5 117 aa12.87□□□□□ -0.35
IFT20-208ENST00000578985 TRBV5-5A0A0J9YX44 114 aa12.87□□□□□ -0.35
IFT20-208ENST00000578985 F5H0A9 414 aaPredicted RBP12.87□□□□□ -0.35
IFT20-208ENST00000578985 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.87□□□□□ -0.35
IFT20-208ENST00000578985 AKR7A2O43488 359 aa12.87□□□□□ -0.35
IFT20-208ENST00000578985 SYNGR1O43759 233 aa12.87□□□□□ -0.35
IFT20-208ENST00000578985 WNT2P09544 360 aa12.87□□□□□ -0.35
IFT20-208ENST00000578985 CPT2P23786 658 aa12.87□□□□□ -0.35
IFT20-208ENST00000578985 AZGP1P25311 298 aaKnown RBP12.87□□□□□ -0.35
IFT20-208ENST00000578985 ATP1B3P54709 279 aa12.87□□□□□ -0.35
IFT20-208ENST00000578985 MTCP1P56278 107 aa12.87□□□□□ -0.35
IFT20-208ENST00000578985 RPS11P62280 158 aaKnown RBP eCLIP12.87□□□□□ -0.35
IFT20-208ENST00000578985 MICBQ29980 383 aa12.87□□□□□ -0.35
IFT20-208ENST00000578985 TEX36Q5VZQ5 186 aa12.87□□□□□ -0.35
IFT20-208ENST00000578985 DCDC5Q6ZRR9 648 aa12.87□□□□□ -0.35
IFT20-208ENST00000578985 TMEM106AQ96A25 262 aa12.87□□□□□ -0.35
IFT20-208ENST00000578985 OPALINQ96PE5 141 aa12.87□□□□□ -0.35
IFT20-208ENST00000578985 PKIBQ9C010 78 aa12.87□□□□□ -0.35
IFT20-208ENST00000578985 LPAR2Q9HBW0 351 aa12.87□□□□□ -0.35
IFT20-208ENST00000578985 POLDIP2Q9Y2S7 368 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms