RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 ZP3P21754 424 aa4.7□□□□□ -1.66
VAPA-203ENST00000577539 SPERTQ8NA61 448 aa4.7□□□□□ -1.66
VAPA-203ENST00000577539 OR2M3Q8NG83 312 aa4.7□□□□□ -1.66
VAPA-203ENST00000577539 DNASE2BQ8WZ79 361 aa4.7□□□□□ -1.66
VAPA-203ENST00000577539 CFHR4Q92496 578 aa4.7□□□□□ -1.66
VAPA-203ENST00000577539 UQCC2Q9BRT2 126 aa4.7□□□□□ -1.66
VAPA-203ENST00000577539 LPAR5Q9H1C0 372 aa4.7□□□□□ -1.66
VAPA-203ENST00000577539 WDR13Q9H1Z4 485 aa4.7□□□□□ -1.66
VAPA-203ENST00000577539 ACKR4Q9NPB9 350 aa4.7□□□□□ -1.66
VAPA-203ENST00000577539 SHPKQ9UHJ6 478 aa4.7□□□□□ -1.66
VAPA-203ENST00000577539 DKKL1Q9UK85 242 aa4.7□□□□□ -1.66
VAPA-203ENST00000577539 SPTBN5Q9NRC6 3674 aaKnown RBP4.7□□□□□ -1.66
VAPA-203ENST00000577539 A0A1B0GTI1 187 aa4.69□□□□□ -1.66
VAPA-203ENST00000577539 OR5H15A6NDH6 313 aa4.69□□□□□ -1.66
VAPA-203ENST00000577539 ADAM10O14672 748 aa4.69□□□□□ -1.66
VAPA-203ENST00000577539 ADAP1O75689 374 aa4.69□□□□□ -1.66
VAPA-203ENST00000577539 LY86O95711 162 aa4.69□□□□□ -1.66
VAPA-203ENST00000577539 CHRM2P08172 466 aa4.69□□□□□ -1.66
VAPA-203ENST00000577539 PGA4P0DJD7 388 aa4.69□□□□□ -1.66
VAPA-203ENST00000577539 PGA3P0DJD8 388 aa4.69□□□□□ -1.66
VAPA-203ENST00000577539 TMEM225BP0DP42 221 aa4.69□□□□□ -1.66
VAPA-203ENST00000577539 FCGR2AP12318 317 aa4.69□□□□□ -1.66
VAPA-203ENST00000577539 GABRR1P24046 479 aa4.69□□□□□ -1.66
VAPA-203ENST00000577539 ZBTB25P24278 435 aa4.69□□□□□ -1.66
VAPA-203ENST00000577539 MICBQ29980 383 aa4.69□□□□□ -1.66
VAPA-203ENST00000577539 ACOT7LQ6ZUV0 252 aa4.69□□□□□ -1.66
VAPA-203ENST00000577539 SLC25A42Q86VD7 318 aa4.69□□□□□ -1.66
VAPA-203ENST00000577539 OR6S1Q8NH40 331 aa4.69□□□□□ -1.66
VAPA-203ENST00000577539 OR1S1Q8NH92 325 aa4.69□□□□□ -1.66
VAPA-203ENST00000577539 EHFQ9NZC4 300 aa4.69□□□□□ -1.66
VAPA-203ENST00000577539 CSAG2Q9Y5P2 127 aa4.69□□□□□ -1.66
VAPA-203ENST00000577539 GPR179Q6PRD1 2367 aa4.69□□□□□ -1.66
VAPA-203ENST00000577539 NCOR1O75376 2440 aa4.69□□□□□ -1.66
VAPA-203ENST00000577539 LOC105371267A0A1B0GV96 52 aa4.69□□□□□ -1.66
VAPA-203ENST00000577539 C5orf63A6NC05 138 aa4.69□□□□□ -1.66
VAPA-203ENST00000577539 OR6C65A6NJZ3 312 aa4.69□□□□□ -1.66
VAPA-203ENST00000577539 CDC14BO60729 498 aa4.69□□□□□ -1.66
VAPA-203ENST00000577539 SCGNO76038 276 aa4.69□□□□□ -1.66
VAPA-203ENST00000577539 OR2F2O95006 317 aa4.69□□□□□ -1.66
VAPA-203ENST00000577539 CLEC3BP05452 202 aa4.69□□□□□ -1.66
VAPA-203ENST00000577539 HIST1H1DP16402 221 aaKnown RBP4.69□□□□□ -1.66
VAPA-203ENST00000577539 EPHA8P29322 1005 aaPredicted RBP4.69□□□□□ -1.66
VAPA-203ENST00000577539 MPGP29372 298 aa4.69□□□□□ -1.66
VAPA-203ENST00000577539 SLC35A1P78382 337 aa4.69□□□□□ -1.66
VAPA-203ENST00000577539 OR2F1Q13607 317 aa4.69□□□□□ -1.66
VAPA-203ENST00000577539 CHRFAM7AQ494W8 412 aa4.69□□□□□ -1.66
VAPA-203ENST00000577539 LPCAT3Q6P1A2 487 aa4.69□□□□□ -1.66
VAPA-203ENST00000577539 TMPPEQ6ZT21 453 aa4.69□□□□□ -1.66
VAPA-203ENST00000577539 DOK3Q7L591 496 aa4.69□□□□□ -1.66
VAPA-203ENST00000577539 OR2W3Q7Z3T1 314 aa4.69□□□□□ -1.66
VAPA-203ENST00000577539 TMEM17Q86X19 198 aa4.69□□□□□ -1.66
VAPA-203ENST00000577539 GTPBP8Q8N3Z3 284 aaPredicted RBP4.69□□□□□ -1.66
VAPA-203ENST00000577539 OR56B1Q8NGI3 324 aa4.69□□□□□ -1.66
VAPA-203ENST00000577539 TERB2Q8NHR7 220 aa4.69□□□□□ -1.66
VAPA-203ENST00000577539 PAQR8Q8TEZ7 354 aa4.69□□□□□ -1.66
VAPA-203ENST00000577539 ROBO4Q8WZ75 1007 aa4.69□□□□□ -1.66
VAPA-203ENST00000577539 MRPL13Q9BYD1 178 aaKnown RBP4.69□□□□□ -1.66
VAPA-203ENST00000577539 REG4Q9BYZ8 158 aa4.69□□□□□ -1.66
VAPA-203ENST00000577539 OR10A2Q9H208 303 aa4.69□□□□□ -1.66
VAPA-203ENST00000577539 GAREM1Q9H706 876 aa4.69□□□□□ -1.66
VAPA-203ENST00000577539 LAMA1P25391 3075 aa4.69□□□□□ -1.66
VAPA-203ENST00000577539 LOC390937A0A1W2PQ73 354 aa4.69□□□□□ -1.66
VAPA-203ENST00000577539 C9J4A7 227 aa4.69□□□□□ -1.66
VAPA-203ENST00000577539 SSX5O60225 188 aa4.69□□□□□ -1.66
VAPA-203ENST00000577539 F10P00742 488 aa4.69□□□□□ -1.66
VAPA-203ENST00000577539 ANOS1P23352 680 aa4.69□□□□□ -1.66
VAPA-203ENST00000577539 PSMB6P28072 239 aa4.69□□□□□ -1.66
VAPA-203ENST00000577539 CASRP41180 1078 aa4.69□□□□□ -1.66
VAPA-203ENST00000577539 SNU13P55769 128 aaKnown RBP4.69□□□□□ -1.66
VAPA-203ENST00000577539 AIMP2Q13155 320 aaKnown RBP4.69□□□□□ -1.66
VAPA-203ENST00000577539 FHL3Q13643 280 aa4.69□□□□□ -1.66
VAPA-203ENST00000577539 SNTB1Q13884 538 aaKnown RBP4.69□□□□□ -1.66
VAPA-203ENST00000577539 SHBQ15464 509 aa4.69□□□□□ -1.66
VAPA-203ENST00000577539 PCK2Q16822 640 aa4.69□□□□□ -1.66
VAPA-203ENST00000577539 HFEQ30201 348 aa4.69□□□□□ -1.66
VAPA-203ENST00000577539 PLAC9Q5JTB6 97 aa4.69□□□□□ -1.66
VAPA-203ENST00000577539 PGAP1Q75T13 922 aa4.69□□□□□ -1.66
VAPA-203ENST00000577539 PEG10Q86TG7 708 aaKnown RBP4.69□□□□□ -1.66
VAPA-203ENST00000577539 OR5AS1Q8N127 324 aa4.69□□□□□ -1.66
VAPA-203ENST00000577539 KCNRGQ8N5I3 272 aa4.69□□□□□ -1.66
VAPA-203ENST00000577539 ZDHHC22Q8N966 263 aa4.69□□□□□ -1.66
VAPA-203ENST00000577539 OR5AN1Q8NGI8 311 aa4.69□□□□□ -1.66
VAPA-203ENST00000577539 OR6X1Q8NH79 312 aa4.69□□□□□ -1.66
VAPA-203ENST00000577539 MITD1Q8WV92 249 aa4.69□□□□□ -1.66
VAPA-203ENST00000577539 EDAQ92838 391 aa4.69□□□□□ -1.66
VAPA-203ENST00000577539 PTX4Q96A99 478 aa4.69□□□□□ -1.66
VAPA-203ENST00000577539 ZNF385AQ96PM9 386 aaKnown RBP4.69□□□□□ -1.66
VAPA-203ENST00000577539 ULBP2Q9BZM5 246 aa4.69□□□□□ -1.66
VAPA-203ENST00000577539 TNFSF18Q9UNG2 199 aa4.69□□□□□ -1.66
VAPA-203ENST00000577539 PRELID1Q9Y255 219 aa4.69□□□□□ -1.66
VAPA-203ENST00000577539 USP34Q70CQ2 3546 aa4.69□□□□□ -1.66
VAPA-203ENST00000577539 IGLV3-12A0A075B6K2 115 aa4.68□□□□□ -1.66
VAPA-203ENST00000577539 FAM230AA0A1W2PPH8 454 aa4.68□□□□□ -1.66
VAPA-203ENST00000577539 TMEM14DPA8MWL7 114 aa4.68□□□□□ -1.66
VAPA-203ENST00000577539 BCL2L11O43521 198 aa4.68□□□□□ -1.66
VAPA-203ENST00000577539 TRAPPC6AO75865 159 aa4.68□□□□□ -1.66
VAPA-203ENST00000577539 TSPAN9O75954 239 aa4.68□□□□□ -1.66
VAPA-203ENST00000577539 HOXD4P09016 255 aaPredicted RBP4.68□□□□□ -1.66
VAPA-203ENST00000577539 MSR1P21757 451 aa4.68□□□□□ -1.66
VAPA-203ENST00000577539 CFPP27918 469 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms