RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 CD80P33681 288 aa11.11□□□□□ -0.63
RPAIN-216ENST00000575599 SRP14P37108 136 aaKnown RBP11.11□□□□□ -0.63
RPAIN-216ENST00000575599 PSMB10P40306 273 aa11.11□□□□□ -0.63
RPAIN-216ENST00000575599 BDH1Q02338 343 aa11.11□□□□□ -0.63
RPAIN-216ENST00000575599 ACSM1Q08AH1 577 aa11.11□□□□□ -0.63
RPAIN-216ENST00000575599 KRTAP21-3Q3LHN1 58 aa11.11□□□□□ -0.63
RPAIN-216ENST00000575599 LIPNQ5VXI9 398 aa11.11□□□□□ -0.63
RPAIN-216ENST00000575599 RPL22L1Q6P5R6 122 aaKnown RBP11.11□□□□□ -0.63
RPAIN-216ENST00000575599 PLPP7Q8NBV4 271 aa11.11□□□□□ -0.63
RPAIN-216ENST00000575599 DEFB108BQ8NET1 73 aa11.11□□□□□ -0.63
RPAIN-216ENST00000575599 ITPKCQ96DU7 683 aa11.11□□□□□ -0.63
RPAIN-216ENST00000575599 PELI1Q96FA3 418 aa11.11□□□□□ -0.63
RPAIN-216ENST00000575599 MICU1Q9BPX6 476 aa11.11□□□□□ -0.63
RPAIN-216ENST00000575599 TMEM246Q9BRR3 403 aa11.11□□□□□ -0.63
RPAIN-216ENST00000575599 RTL8AQ9BWD3 113 aa11.11□□□□□ -0.63
RPAIN-216ENST00000575599 TMEM165Q9HC07 324 aa11.11□□□□□ -0.63
RPAIN-216ENST00000575599 G6PC2Q9NQR9 355 aa11.11□□□□□ -0.63
RPAIN-216ENST00000575599 BATF3Q9NR55 127 aa11.11□□□□□ -0.63
RPAIN-216ENST00000575599 OR52A1Q9UKL2 312 aa11.11□□□□□ -0.63
RPAIN-216ENST00000575599 CUBNO60494 3623 aa11.11□□□□□ -0.63
RPAIN-216ENST00000575599 A0A0G2JMP0 313 aa11.1□□□□□ -0.63
RPAIN-216ENST00000575599 TRBV2A0A0J9YWF9 115 aa11.1□□□□□ -0.63
RPAIN-216ENST00000575599 A0A0X1KG70 313 aa11.1□□□□□ -0.63
RPAIN-216ENST00000575599 ZNF816-ZNF321PA0A0X1KG74 233 aa11.1□□□□□ -0.63
RPAIN-216ENST00000575599 CCDC160A6NGH7 325 aa11.1□□□□□ -0.63
RPAIN-216ENST00000575599 F5H0A9 414 aaPredicted RBP11.1□□□□□ -0.63
RPAIN-216ENST00000575599 CCRL2O00421 344 aa11.1□□□□□ -0.63
RPAIN-216ENST00000575599 FOXH1O75593 365 aa11.1□□□□□ -0.63
RPAIN-216ENST00000575599 CST4P01036 141 aa11.1□□□□□ -0.63
RPAIN-216ENST00000575599 IFNA2P01563 188 aa11.1□□□□□ -0.63
RPAIN-216ENST00000575599 CELP19835 753 aa11.1□□□□□ -0.63
RPAIN-216ENST00000575599 ZFP36P26651 326 aaKnown RBP11.1□□□□□ -0.63
RPAIN-216ENST00000575599 MAP2K3P46734 347 aa11.1□□□□□ -0.63
RPAIN-216ENST00000575599 ALDH3B2P48448 385 aa11.1□□□□□ -0.63
RPAIN-216ENST00000575599 GP2P55259 537 aaKnown RBP11.1□□□□□ -0.63
RPAIN-216ENST00000575599 ZNF154Q13106 437 aa11.1□□□□□ -0.63
RPAIN-216ENST00000575599 ODF4Q2M2E3 257 aa11.1□□□□□ -0.63
RPAIN-216ENST00000575599 ZNF404Q494X3 552 aa11.1□□□□□ -0.63
RPAIN-216ENST00000575599 CCDC58Q4VC31 144 aa11.1□□□□□ -0.63
RPAIN-216ENST00000575599 ESCO2Q56NI9 601 aa11.1□□□□□ -0.63
RPAIN-216ENST00000575599 DCAF12L2Q5VW00 463 aa11.1□□□□□ -0.63
RPAIN-216ENST00000575599 SFRP4Q6FHJ7 346 aaPredicted RBP11.1□□□□□ -0.63
RPAIN-216ENST00000575599 ZDHHC23Q8IYP9 409 aa11.1□□□□□ -0.63
RPAIN-216ENST00000575599 ZFP41Q8N8Y5 198 aa11.1□□□□□ -0.63
RPAIN-216ENST00000575599 SEMA6DQ8NFY4 1073 aa11.1□□□□□ -0.63
RPAIN-216ENST00000575599 OR1M1Q8NGA1 313 aa11.1□□□□□ -0.63
RPAIN-216ENST00000575599 OR4M2Q8NGB6 313 aa11.1□□□□□ -0.63
RPAIN-216ENST00000575599 COMMD4Q9H0A8 199 aa11.1□□□□□ -0.63
RPAIN-216ENST00000575599 METTL17Q9H7H0 456 aaPredicted RBP11.1□□□□□ -0.63
RPAIN-216ENST00000575599 SLC22A13Q9Y226 551 aa11.1□□□□□ -0.63
RPAIN-216ENST00000575599 MPC1Q9Y5U8 109 aa11.1□□□□□ -0.63
RPAIN-216ENST00000575599 P2RY10O00398 339 aa11.09□□□□□ -0.63
RPAIN-216ENST00000575599 PHF1O43189 567 aaPredicted RBP11.09□□□□□ -0.63
RPAIN-216ENST00000575599 IGLV3-1P01715 115 aa11.09□□□□□ -0.63
RPAIN-216ENST00000575599 FAHP16930 419 aa11.09□□□□□ -0.63
RPAIN-216ENST00000575599 THBS2P35442 1172 aa11.09□□□□□ -0.63
RPAIN-216ENST00000575599 TGM4P49221 684 aa11.09□□□□□ -0.63
RPAIN-216ENST00000575599 GTF2A1P52655 376 aaPredicted RBP11.09□□□□□ -0.63
RPAIN-216ENST00000575599 RIPPLY1Q0D2K3 151 aa11.09□□□□□ -0.63
RPAIN-216ENST00000575599 ALKBH1Q13686 389 aaKnown RBP11.09□□□□□ -0.63
RPAIN-216ENST00000575599 DMRTC1Q5HYR2 192 aa11.09□□□□□ -0.63
RPAIN-216ENST00000575599 CEP78Q5JTW2 689 aa11.09□□□□□ -0.63
RPAIN-216ENST00000575599 ZNF684Q5T5D7 378 aa11.09□□□□□ -0.63
RPAIN-216ENST00000575599 LIPKQ5VXJ0 399 aa11.09□□□□□ -0.63
RPAIN-216ENST00000575599 SATL1Q86VE3 508 aa11.09□□□□□ -0.63
RPAIN-216ENST00000575599 ELMOD2Q8IZ81 293 aa11.09□□□□□ -0.63
RPAIN-216ENST00000575599 ZNF676Q8N7Q3 588 aa11.09□□□□□ -0.63
RPAIN-216ENST00000575599 LRRC29Q8WV35 223 aa11.09□□□□□ -0.63
RPAIN-216ENST00000575599 HPSE2Q8WWQ2 592 aa11.09□□□□□ -0.63
RPAIN-216ENST00000575599 OR5P3Q8WZ94 311 aa11.09□□□□□ -0.63
RPAIN-216ENST00000575599 RNF170Q96K19 258 aa11.09□□□□□ -0.63
RPAIN-216ENST00000575599 OPALINQ96PE5 141 aa11.09□□□□□ -0.63
RPAIN-216ENST00000575599 HIST1H2AAQ96QV6 131 aa11.09□□□□□ -0.63
RPAIN-216ENST00000575599 ABCB9Q9NP78 766 aa11.09□□□□□ -0.63
RPAIN-216ENST00000575599 NDUFA13Q9P0J0 144 aa11.09□□□□□ -0.63
RPAIN-216ENST00000575599 MIOXQ9UGB7 285 aa11.09□□□□□ -0.63
RPAIN-216ENST00000575599 PIGLQ9Y2B2 252 aa11.09□□□□□ -0.63
RPAIN-216ENST00000575599 JMJD1CQ15652 2540 aa11.08□□□□□ -0.64
RPAIN-216ENST00000575599 ARHGAP32A7KAX9 2087 aa11.08□□□□□ -0.64
RPAIN-216ENST00000575599 E9PI62 339 aa11.08□□□□□ -0.64
RPAIN-216ENST00000575599 H3BSH0 61 aa11.08□□□□□ -0.64
RPAIN-216ENST00000575599 LGALS8O00214 317 aa11.08□□□□□ -0.64
RPAIN-216ENST00000575599 CDIPTO14735 213 aa11.08□□□□□ -0.64
RPAIN-216ENST00000575599 MTRF1O75570 445 aaKnown RBP11.08□□□□□ -0.64
RPAIN-216ENST00000575599 DHRS3O75911 302 aa11.08□□□□□ -0.64
RPAIN-216ENST00000575599 AVPP01185 164 aa11.08□□□□□ -0.64
RPAIN-216ENST00000575599 WNT2P09544 360 aa11.08□□□□□ -0.64
RPAIN-216ENST00000575599 CD36P16671 472 aa11.08□□□□□ -0.64
RPAIN-216ENST00000575599 CPEP16870 476 aa11.08□□□□□ -0.64
RPAIN-216ENST00000575599 EGR1P18146 543 aa11.08□□□□□ -0.64
RPAIN-216ENST00000575599 PSMA1P25786 263 aaKnown RBP11.08□□□□□ -0.64
RPAIN-216ENST00000575599 GNB2P62879 340 aa11.08□□□□□ -0.64
RPAIN-216ENST00000575599 GPR50Q13585 617 aa11.08□□□□□ -0.64
RPAIN-216ENST00000575599 TIMM50Q3ZCQ8 353 aa11.08□□□□□ -0.64
RPAIN-216ENST00000575599 PLCXD3Q63HM9 321 aa11.08□□□□□ -0.64
RPAIN-216ENST00000575599 LYPD2Q6UXB3 125 aa11.08□□□□□ -0.64
RPAIN-216ENST00000575599 DCDC5Q6ZRR9 648 aa11.08□□□□□ -0.64
RPAIN-216ENST00000575599 NLRC3Q7RTR2 1065 aa11.08□□□□□ -0.64
RPAIN-216ENST00000575599 CATSPERDQ86XM0 798 aa11.08□□□□□ -0.64
RPAIN-216ENST00000575599 C11orf53Q8IXP5 236 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms