RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 RGP1Q92546 391 aaPredicted RBP13.23□□□□□ -0.29
CHD3-215ENST00000572750 ZNF184Q99676 751 aaPredicted RBP13.23□□□□□ -0.29
CHD3-215ENST00000572750 TMEM246Q9BRR3 403 aa13.23□□□□□ -0.29
CHD3-215ENST00000572750 COMMD4Q9H0A8 199 aa13.23□□□□□ -0.29
CHD3-215ENST00000572750 OR51I2Q9H344 312 aa13.23□□□□□ -0.29
CHD3-215ENST00000572750 TMEM165Q9HC07 324 aa13.23□□□□□ -0.29
CHD3-215ENST00000572750 TRIM36Q9NQ86 728 aa13.23□□□□□ -0.29
CHD3-215ENST00000572750 RAB26Q9ULW5 256 aa13.23□□□□□ -0.29
CHD3-215ENST00000572750 OOEPA6NGQ2 149 aa13.22□□□□□ -0.29
CHD3-215ENST00000572750 B4DSR2 109 aa13.22□□□□□ -0.29
CHD3-215ENST00000572750 PTGES3LE9PB15 166 aa13.22□□□□□ -0.29
CHD3-215ENST00000572750 F5H0A9 414 aaPredicted RBP13.22□□□□□ -0.29
CHD3-215ENST00000572750 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.22□□□□□ -0.29
CHD3-215ENST00000572750 RRP9O43818 475 aaKnown RBP13.22□□□□□ -0.29
CHD3-215ENST00000572750 RHBDL1O75783 438 aa13.22□□□□□ -0.29
CHD3-215ENST00000572750 CDK1P06493 297 aa13.22□□□□□ -0.29
CHD3-215ENST00000572750 ZNF12P17014 697 aa13.22□□□□□ -0.29
CHD3-215ENST00000572750 ZNF20P17024 532 aa13.22□□□□□ -0.29
CHD3-215ENST00000572750 UBE2V2Q15819 145 aa13.22□□□□□ -0.29
CHD3-215ENST00000572750 FAM76BQ5HYJ3 339 aa13.22□□□□□ -0.29
CHD3-215ENST00000572750 HAGHLQ6PII5 290 aaPredicted RBP13.22□□□□□ -0.29
CHD3-215ENST00000572750 ZNF485Q8NCK3 441 aa13.22□□□□□ -0.29
CHD3-215ENST00000572750 CCDC54Q8NEL0 328 aa13.22□□□□□ -0.29
CHD3-215ENST00000572750 OR51F2Q8NH61 342 aa13.22□□□□□ -0.29
CHD3-215ENST00000572750 HAVCR2Q8TDQ0 301 aa13.22□□□□□ -0.29
CHD3-215ENST00000572750 TSEN15Q8WW01 171 aaKnown RBP13.22□□□□□ -0.29
CHD3-215ENST00000572750 FGGYQ96C11 551 aa13.22□□□□□ -0.29
CHD3-215ENST00000572750 SEH1LQ96EE3 360 aa13.22□□□□□ -0.29
CHD3-215ENST00000572750 PATZ1Q9HBE1 687 aaKnown RBP13.22□□□□□ -0.29
CHD3-215ENST00000572750 KCNS2Q9ULS6 477 aa13.22□□□□□ -0.29
CHD3-215ENST00000572750 SIRT4Q9Y6E7 314 aaPredicted RBP13.22□□□□□ -0.29
CHD3-215ENST00000572750 FAM230AA0A1W2PPH8 454 aa13.21□□□□□ -0.29
CHD3-215ENST00000572750 PQLC2LA1A4F0 135 aa13.21□□□□□ -0.29
CHD3-215ENST00000572750 SRRM5B3KS81 715 aa13.21□□□□□ -0.29
CHD3-215ENST00000572750 LGALS8O00214 317 aa13.21□□□□□ -0.29
CHD3-215ENST00000572750 AKR7A2O43488 359 aa13.21□□□□□ -0.29
CHD3-215ENST00000572750 GATBO75879 557 aaKnown RBP13.21□□□□□ -0.29
CHD3-215ENST00000572750 FSTL3O95633 263 aa13.21□□□□□ -0.29
CHD3-215ENST00000572750 LHBP01229 141 aa13.21□□□□□ -0.29
CHD3-215ENST00000572750 HAAOP46952 286 aa13.21□□□□□ -0.29
CHD3-215ENST00000572750 SLC35A2P78381 396 aa13.21□□□□□ -0.29
CHD3-215ENST00000572750 LCN2P80188 198 aa13.21□□□□□ -0.29
CHD3-215ENST00000572750 CCDC58Q4VC31 144 aa13.21□□□□□ -0.29
CHD3-215ENST00000572750 RPL22L1Q6P5R6 122 aaKnown RBP13.21□□□□□ -0.29
CHD3-215ENST00000572750 LYPD2Q6UXB3 125 aa13.21□□□□□ -0.29
CHD3-215ENST00000572750 FAM90A1Q86YD7 464 aa13.21□□□□□ -0.29
CHD3-215ENST00000572750 RPS4Y2Q8TD47 263 aa13.21□□□□□ -0.29
CHD3-215ENST00000572750 PP6455Q8WZ26 134 aa13.21□□□□□ -0.29
CHD3-215ENST00000572750 C10orf35Q96D05 121 aa13.21□□□□□ -0.29
CHD3-215ENST00000572750 SMIM19Q96E16 107 aa13.21□□□□□ -0.29
CHD3-215ENST00000572750 WDR13Q9H1Z4 485 aa13.21□□□□□ -0.29
CHD3-215ENST00000572750 BABAM2Q9NXR7 383 aa13.21□□□□□ -0.29
CHD3-215ENST00000572750 SCN3BQ9NY72 215 aa13.21□□□□□ -0.29
CHD3-215ENST00000572750 TGP01266 2768 aa13.2□□□□□ -0.3
CHD3-215ENST00000572750 PNMA8CA0A1B0GUJ8 204 aa13.2□□□□□ -0.3
CHD3-215ENST00000572750 PLPP2O43688 288 aa13.2□□□□□ -0.3
CHD3-215ENST00000572750 SYNGR1O43759 233 aa13.2□□□□□ -0.3
CHD3-215ENST00000572750 CRLF1O75462 422 aa13.2□□□□□ -0.3
CHD3-215ENST00000572750 GYPAP02724 150 aa13.2□□□□□ -0.3
CHD3-215ENST00000572750 WNT4P56705 351 aa13.2□□□□□ -0.3
CHD3-215ENST00000572750 CNN3Q15417 329 aaKnown RBP13.2□□□□□ -0.3
CHD3-215ENST00000572750 DCDC5Q6ZRR9 648 aa13.2□□□□□ -0.3
CHD3-215ENST00000572750 IL17RELQ6ZVW7 336 aa13.2□□□□□ -0.3
CHD3-215ENST00000572750 GLCCI1Q86VQ1 547 aa13.2□□□□□ -0.3
CHD3-215ENST00000572750 OR13C5Q8NGS8 318 aa13.2□□□□□ -0.3
CHD3-215ENST00000572750 AQP3Q92482 292 aa13.2□□□□□ -0.3
CHD3-215ENST00000572750 MYDGFQ969H8 173 aa13.2□□□□□ -0.3
CHD3-215ENST00000572750 TMEM186Q96B77 213 aa13.2□□□□□ -0.3
CHD3-215ENST00000572750 HIF1ANQ9NWT6 349 aa13.2□□□□□ -0.3
CHD3-215ENST00000572750 DHDHQ9UQ10 334 aa13.2□□□□□ -0.3
CHD3-215ENST00000572750 ARHGAP32A7KAX9 2087 aa13.19□□□□□ -0.3
CHD3-215ENST00000572750 IGKV1-27A0A075B6S5 117 aa13.19□□□□□ -0.3
CHD3-215ENST00000572750 TRAV38-1A0A0B4J264 116 aa13.19□□□□□ -0.3
CHD3-215ENST00000572750 IGKV1-9A0A0C4DH69 117 aa13.19□□□□□ -0.3
CHD3-215ENST00000572750 J3QT63 122 aa13.19□□□□□ -0.3
CHD3-215ENST00000572750 PHF1O43189 567 aaPredicted RBP13.19□□□□□ -0.3
CHD3-215ENST00000572750 PLATP00750 562 aa13.19□□□□□ -0.3
CHD3-215ENST00000572750 SERPINA3P01011 423 aa13.19□□□□□ -0.3
CHD3-215ENST00000572750 CRHBPP24387 322 aa13.19□□□□□ -0.3
CHD3-215ENST00000572750 ZFP36P26651 326 aaKnown RBP13.19□□□□□ -0.3
CHD3-215ENST00000572750 SOX2P48431 317 aa13.19□□□□□ -0.3
CHD3-215ENST00000572750 DVL1P1P54792 670 aaPredicted RBP13.19□□□□□ -0.3
CHD3-215ENST00000572750 ESCO2Q56NI9 601 aa13.19□□□□□ -0.3
CHD3-215ENST00000572750 TEX36Q5VZQ5 186 aa13.19□□□□□ -0.3
CHD3-215ENST00000572750 ANGPTL5Q86XS5 388 aa13.19□□□□□ -0.3
CHD3-215ENST00000572750 ZNF573Q86YE8 665 aa13.19□□□□□ -0.3
CHD3-215ENST00000572750 CALHM1Q8IU99 346 aa13.19□□□□□ -0.3
CHD3-215ENST00000572750 BATF2Q8N1L9 274 aa13.19□□□□□ -0.3
CHD3-215ENST00000572750 NANOGP1Q8N7R0 232 aa13.19□□□□□ -0.3
CHD3-215ENST00000572750 OR8B3Q8NGG8 313 aa13.19□□□□□ -0.3
CHD3-215ENST00000572750 OR13C9Q8NGT0 318 aa13.19□□□□□ -0.3
CHD3-215ENST00000572750 OR10Z1Q8NGY1 313 aa13.19□□□□□ -0.3
CHD3-215ENST00000572750 ZNF488Q96MN9 340 aa13.19□□□□□ -0.3
CHD3-215ENST00000572750 TECTBQ96PL2 329 aa13.19□□□□□ -0.3
CHD3-215ENST00000572750 OR8B2Q96RD0 313 aa13.19□□□□□ -0.3
CHD3-215ENST00000572750 MND1Q9BWT6 205 aa13.19□□□□□ -0.3
CHD3-215ENST00000572750 CTSZQ9UBR2 303 aa13.19□□□□□ -0.3
CHD3-215ENST00000572750 MIOXQ9UGB7 285 aa13.19□□□□□ -0.3
CHD3-215ENST00000572750 SLC7A11Q9UPY5 501 aa13.19□□□□□ -0.3
CHD3-215ENST00000572750 ERGIC3Q9Y282 383 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms