RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 PCNX2A6NKB5 2137 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 MED13Q9UHV7 2174 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 A0A0J9YY10 115 aa3.1□□□□□ -1.91
SMG6-208ENST00000570874 LRP5LA4QPB2 252 aa3.1□□□□□ -1.91
SMG6-208ENST00000570874 OR6C6A6NF89 314 aa3.1□□□□□ -1.91
SMG6-208ENST00000570874 PATE3B3GLJ2 98 aa3.1□□□□□ -1.91
SMG6-208ENST00000570874 DLL1O00548 723 aa3.1□□□□□ -1.91
SMG6-208ENST00000570874 VCYO14598 125 aa3.1□□□□□ -1.91
SMG6-208ENST00000570874 EI24O14681 340 aa3.1□□□□□ -1.91
SMG6-208ENST00000570874 FGF16O43320 207 aa3.1□□□□□ -1.91
SMG6-208ENST00000570874 SYT7O43581 403 aa3.1□□□□□ -1.91
SMG6-208ENST00000570874 HYAL3O43820 417 aaPredicted RBP3.1□□□□□ -1.91
SMG6-208ENST00000570874 MPZL1O95297 269 aa3.1□□□□□ -1.91
SMG6-208ENST00000570874 NTN1O95631 604 aa3.1□□□□□ -1.91
SMG6-208ENST00000570874 RAB36O95755 333 aa3.1□□□□□ -1.91
SMG6-208ENST00000570874 ZNF682O95780 498 aa3.1□□□□□ -1.91
SMG6-208ENST00000570874 MT-CO2P00403 227 aa3.1□□□□□ -1.91
SMG6-208ENST00000570874 CD74P04233 296 aa3.1□□□□□ -1.91
SMG6-208ENST00000570874 SEMG1P04279 462 aa3.1□□□□□ -1.91
SMG6-208ENST00000570874 CT62P0C5K7 136 aa3.1□□□□□ -1.91
SMG6-208ENST00000570874 METTL15P1P0C7V9 234 aa3.1□□□□□ -1.91
SMG6-208ENST00000570874 HIST1H1EP10412 219 aaKnown RBP3.1□□□□□ -1.91
SMG6-208ENST00000570874 TDGF1P13385 188 aa3.1□□□□□ -1.91
SMG6-208ENST00000570874 SPI1P17947 270 aa3.1□□□□□ -1.91
SMG6-208ENST00000570874 HIST1H1TP22492 207 aaPredicted RBP3.1□□□□□ -1.91
SMG6-208ENST00000570874 PRKACGP22612 351 aa3.1□□□□□ -1.91
SMG6-208ENST00000570874 CRHBPP24387 322 aa3.1□□□□□ -1.91
SMG6-208ENST00000570874 RPL35P42766 123 aaKnown RBP3.1□□□□□ -1.91
SMG6-208ENST00000570874 CXCL12P48061 93 aa3.1□□□□□ -1.91
SMG6-208ENST00000570874 FUT6P51993 359 aa3.1□□□□□ -1.91
SMG6-208ENST00000570874 RAB25P57735 213 aa3.1□□□□□ -1.91
SMG6-208ENST00000570874 OR1D5P58170 312 aa3.1□□□□□ -1.91
SMG6-208ENST00000570874 TAS2R41P59536 307 aa3.1□□□□□ -1.91
SMG6-208ENST00000570874 COPZ1P61923 177 aa3.1□□□□□ -1.91
SMG6-208ENST00000570874 RPL32P62910 135 aaKnown RBP3.1□□□□□ -1.91
SMG6-208ENST00000570874 FUT5Q11128 374 aa3.1□□□□□ -1.91
SMG6-208ENST00000570874 BIKQ13323 160 aa3.1□□□□□ -1.91
SMG6-208ENST00000570874 DNASE1L3Q13609 305 aa3.1□□□□□ -1.91
SMG6-208ENST00000570874 KIR2DS3Q14952 304 aa3.1□□□□□ -1.91
SMG6-208ENST00000570874 MAD2L1BPQ15013 274 aaPredicted RBP3.1□□□□□ -1.91
SMG6-208ENST00000570874 LPAL2Q16609 132 aa3.1□□□□□ -1.91
SMG6-208ENST00000570874 NKPD1Q17RQ9 610 aa3.1□□□□□ -1.91
SMG6-208ENST00000570874 RSPO4Q2I0M5 234 aaPredicted RBP3.1□□□□□ -1.91
SMG6-208ENST00000570874 ZNF181Q2M3W8 571 aa3.1□□□□□ -1.91
SMG6-208ENST00000570874 VMACQ2NL98 169 aa3.1□□□□□ -1.91
SMG6-208ENST00000570874 RPEL1Q2QD12 228 aa3.1□□□□□ -1.91
SMG6-208ENST00000570874 MS4A18Q3C1V0 323 aa3.1□□□□□ -1.91
SMG6-208ENST00000570874 ARHGAP11BQ3KRB8 267 aa3.1□□□□□ -1.91
SMG6-208ENST00000570874 ELOA3BQ3SY89 546 aa3.1□□□□□ -1.91
SMG6-208ENST00000570874 ACSF3Q4G176 576 aaPredicted RBP3.1□□□□□ -1.91
SMG6-208ENST00000570874 DEFB134Q4QY38 66 aa3.1□□□□□ -1.91
SMG6-208ENST00000570874 CYBRD1Q53TN4 286 aa3.1□□□□□ -1.91
SMG6-208ENST00000570874 OR2B11Q5JQS5 317 aa3.1□□□□□ -1.91
SMG6-208ENST00000570874 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.1□□□□□ -1.91
SMG6-208ENST00000570874 WDR25Q64LD2 544 aaPredicted RBP3.1□□□□□ -1.91
SMG6-208ENST00000570874 SFRP4Q6FHJ7 346 aaPredicted RBP3.1□□□□□ -1.91
SMG6-208ENST00000570874 PWWP2BQ6NUJ5 590 aa3.1□□□□□ -1.91
SMG6-208ENST00000570874 TNFAIP8L2Q6P589 184 aaPredicted RBP3.1□□□□□ -1.91
SMG6-208ENST00000570874 UNQ6126/PRO20091Q6UXV3 157 aa3.1□□□□□ -1.91
SMG6-208ENST00000570874 PQLC2Q6ZP29 291 aa3.1□□□□□ -1.91
SMG6-208ENST00000570874 DGAT2L6Q6ZPD8 337 aa3.1□□□□□ -1.91
SMG6-208ENST00000570874 C22orf34Q6ZV56 151 aa3.1□□□□□ -1.91
SMG6-208ENST00000570874 PEG10Q86TG7 708 aaKnown RBP3.1□□□□□ -1.91
SMG6-208ENST00000570874 MRPL52Q86TS9 123 aaKnown RBP3.1□□□□□ -1.91
SMG6-208ENST00000570874 LRRC28Q86X40 367 aaPredicted RBP3.1□□□□□ -1.91
SMG6-208ENST00000570874 NIT1Q86X76 327 aa3.1□□□□□ -1.91
SMG6-208ENST00000570874 UEVLDQ8IX04 471 aa3.1□□□□□ -1.91
SMG6-208ENST00000570874 METTL27Q8N6F8 245 aaPredicted RBP3.1□□□□□ -1.91
SMG6-208ENST00000570874 NANOGP1Q8N7R0 232 aa3.1□□□□□ -1.91
SMG6-208ENST00000570874 ELOA3Q8NG57 546 aa3.1□□□□□ -1.91
SMG6-208ENST00000570874 OR5D16Q8NGK9 328 aa3.1□□□□□ -1.91
SMG6-208ENST00000570874 OR1J2Q8NGS2 313 aa3.1□□□□□ -1.91
SMG6-208ENST00000570874 OR2AE1Q8NHA4 323 aa3.1□□□□□ -1.91
SMG6-208ENST00000570874 NT5CQ8TCD5 201 aa3.1□□□□□ -1.91
SMG6-208ENST00000570874 ABHD3Q8WU67 409 aa3.1□□□□□ -1.91
SMG6-208ENST00000570874 TNFAIP8L1Q8WVP5 186 aa3.1□□□□□ -1.91
SMG6-208ENST00000570874 UBE2E3Q969T4 207 aa3.1□□□□□ -1.91
SMG6-208ENST00000570874 FLYWCH2Q96CP2 140 aaKnown RBP3.1□□□□□ -1.91
SMG6-208ENST00000570874 ZBED6CLQ96FA7 236 aaPredicted RBP3.1□□□□□ -1.91
SMG6-208ENST00000570874 TIMD4Q96H15 378 aa3.1□□□□□ -1.91
SMG6-208ENST00000570874 ZNF582Q96NG8 517 aaPredicted RBP3.1□□□□□ -1.91
SMG6-208ENST00000570874 OR5M11Q96RB7 305 aa3.1□□□□□ -1.91
SMG6-208ENST00000570874 APOL4Q9BPW4 351 aa3.1□□□□□ -1.91
SMG6-208ENST00000570874 VPS25Q9BRG1 176 aa3.1□□□□□ -1.91
SMG6-208ENST00000570874 PDCD10Q9BUL8 212 aa3.1□□□□□ -1.91
SMG6-208ENST00000570874 DPCDQ9BVM2 203 aaPredicted RBP3.1□□□□□ -1.91
SMG6-208ENST00000570874 ACTR6Q9GZN1 396 aa3.1□□□□□ -1.91
SMG6-208ENST00000570874 MIXL1Q9H2W2 232 aa3.1□□□□□ -1.91
SMG6-208ENST00000570874 PATZ1Q9HBE1 687 aaKnown RBP3.1□□□□□ -1.91
SMG6-208ENST00000570874 NOX4Q9NPH5 578 aa3.1□□□□□ -1.91
SMG6-208ENST00000570874 NIT2Q9NQR4 276 aa3.1□□□□□ -1.91
SMG6-208ENST00000570874 DCAF13Q9NV06 445 aaKnown RBP3.1□□□□□ -1.91
SMG6-208ENST00000570874 HRASLS2Q9NWW9 162 aa3.1□□□□□ -1.91
SMG6-208ENST00000570874 ING3Q9NXR8 418 aa3.1□□□□□ -1.91
SMG6-208ENST00000570874 FBLN5Q9UBX5 448 aa3.1□□□□□ -1.91
SMG6-208ENST00000570874 CES1P1Q9UKY3 287 aa3.1□□□□□ -1.91
SMG6-208ENST00000570874 POMT2Q9UKY4 750 aa3.1□□□□□ -1.91
SMG6-208ENST00000570874 YARS2Q9Y2Z4 477 aaKnown RBP3.1□□□□□ -1.91
SMG6-208ENST00000570874 SIT1Q9Y3P8 196 aa3.1□□□□□ -1.91
SMG6-208ENST00000570874 TNRC6AQ8NDV7 1962 aaKnown RBP3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms