RNA–Protein interactions for RNA: ENST00000570510.6

VPS53-207, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 4

Gene VPS53, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-207ENST00000570510 A0A1W2PPE2 198 aa8.94□□□□□ -0.98
VPS53-207ENST00000570510 A0A1W2PPH5 198 aa8.94□□□□□ -0.98
VPS53-207ENST00000570510 A0A1W2PR64 198 aa8.94□□□□□ -0.98
VPS53-207ENST00000570510 A0A1W2PRV1 198 aa8.94□□□□□ -0.98
VPS53-207ENST00000570510 ANKRD30BLA7E2S9 258 aa8.94□□□□□ -0.98
VPS53-207ENST00000570510 APOC1P02654 83 aa8.94□□□□□ -0.98
VPS53-207ENST00000570510 ACSM4P0C7M7 580 aa8.94□□□□□ -0.98
VPS53-207ENST00000570510 RAB13P51153 203 aa8.94□□□□□ -0.98
VPS53-207ENST00000570510 ELF3P78545 371 aaPredicted RBP8.94□□□□□ -0.98
VPS53-207ENST00000570510 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.94□□□□□ -0.98
VPS53-207ENST00000570510 ATP6AP1Q15904 470 aa8.94□□□□□ -0.98
VPS53-207ENST00000570510 KRTAP27-1Q3LI81 207 aa8.94□□□□□ -0.98
VPS53-207ENST00000570510 C1orf146Q5VVC0 180 aa8.94□□□□□ -0.98
VPS53-207ENST00000570510 CORO6Q6QEF8 472 aa8.94□□□□□ -0.98
VPS53-207ENST00000570510 FAM185AQ8N0U4 392 aa8.94□□□□□ -0.98
VPS53-207ENST00000570510 OR4K13Q8NH42 304 aa8.94□□□□□ -0.98
VPS53-207ENST00000570510 OR5K1Q8NHB7 308 aa8.94□□□□□ -0.98
VPS53-207ENST00000570510 CAPSLQ8WWF8 208 aa8.94□□□□□ -0.98
VPS53-207ENST00000570510 MYDGFQ969H8 173 aa8.94□□□□□ -0.98
VPS53-207ENST00000570510 ATF6BQ99941 703 aa8.94□□□□□ -0.98
VPS53-207ENST00000570510 ZNF649Q9BS31 505 aa8.94□□□□□ -0.98
VPS53-207ENST00000570510 FN3KQ9H479 309 aa8.94□□□□□ -0.98
VPS53-207ENST00000570510 OPA3Q9H6K4 179 aa8.94□□□□□ -0.98
VPS53-207ENST00000570510 SP140LQ9H930 580 aa8.94□□□□□ -0.98
VPS53-207ENST00000570510 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.94□□□□□ -0.98
VPS53-207ENST00000570510 TCF19Q9Y242 345 aa8.94□□□□□ -0.98
VPS53-207ENST00000570510 AP4S1Q9Y587 144 aa8.94□□□□□ -0.98
VPS53-207ENST00000570510 U3KQV3 271 aa8.94□□□□□ -0.98
VPS53-207ENST00000570510 OR6C68A6NDL8 312 aa8.93□□□□□ -0.98
VPS53-207ENST00000570510 PRODHO43272 600 aa8.93□□□□□ -0.98
VPS53-207ENST00000570510 RAMP3O60896 148 aa8.93□□□□□ -0.98
VPS53-207ENST00000570510 ZNF823P16415 610 aa8.93□□□□□ -0.98
VPS53-207ENST00000570510 FMO3P31513 532 aa8.93□□□□□ -0.98
VPS53-207ENST00000570510 CDK5Q00535 292 aa8.93□□□□□ -0.98
VPS53-207ENST00000570510 MEP1BQ16820 701 aa8.93□□□□□ -0.98
VPS53-207ENST00000570510 TMEM95Q3KNT9 176 aa8.93□□□□□ -0.98
VPS53-207ENST00000570510 SLC35D3Q5M8T2 416 aa8.93□□□□□ -0.98
VPS53-207ENST00000570510 FAHD1Q6P587 224 aa8.93□□□□□ -0.98
VPS53-207ENST00000570510 SHFQ7M4L6 423 aa8.93□□□□□ -0.98
VPS53-207ENST00000570510 NAA40Q86UY6 237 aa8.93□□□□□ -0.98
VPS53-207ENST00000570510 ZDHHC13Q8IUH4 622 aa8.93□□□□□ -0.98
VPS53-207ENST00000570510 WIPF2Q8TF74 440 aaPredicted RBP8.93□□□□□ -0.98
VPS53-207ENST00000570510 SPTSSAQ969W0 71 aa8.93□□□□□ -0.98
VPS53-207ENST00000570510 CENPNQ96H22 339 aaPredicted RBP8.93□□□□□ -0.98
VPS53-207ENST00000570510 GABARAPL1Q9H0R8 117 aa8.93□□□□□ -0.98
VPS53-207ENST00000570510 EGLN3Q9H6Z9 239 aa8.93□□□□□ -0.98
VPS53-207ENST00000570510 SLC25A19Q9HC21 320 aa8.93□□□□□ -0.98
VPS53-207ENST00000570510 RPRD1BQ9NQG5 326 aaKnown RBP8.93□□□□□ -0.98
VPS53-207ENST00000570510 SNTG1Q9NSN8 517 aa8.93□□□□□ -0.98
VPS53-207ENST00000570510 VNN3Q9NY84 501 aa8.93□□□□□ -0.98
VPS53-207ENST00000570510 HAO2Q9NYQ3 351 aa8.93□□□□□ -0.98
VPS53-207ENST00000570510 N6AMT1Q9Y5N5 214 aa8.93□□□□□ -0.98
VPS53-207ENST00000570510 H3BN98 237 aa8.92□□□□□ -0.98
VPS53-207ENST00000570510 DCTN6O00399 190 aa8.92□□□□□ -0.98
VPS53-207ENST00000570510 SELLP14151 372 aa8.92□□□□□ -0.98
VPS53-207ENST00000570510 COX7A1P24310 79 aa8.92□□□□□ -0.98
VPS53-207ENST00000570510 OTX1P32242 354 aaPredicted RBP8.92□□□□□ -0.98
VPS53-207ENST00000570510 GNALP38405 381 aa8.92□□□□□ -0.98
VPS53-207ENST00000570510 SLC15A1P46059 708 aa8.92□□□□□ -0.98
VPS53-207ENST00000570510 GABRA2P47869 451 aa8.92□□□□□ -0.98
VPS53-207ENST00000570510 TGM4P49221 684 aa8.92□□□□□ -0.98
VPS53-207ENST00000570510 CAPZA1P52907 286 aa8.92□□□□□ -0.98
VPS53-207ENST00000570510 ACTR3P61158 418 aa8.92□□□□□ -0.98
VPS53-207ENST00000570510 BLCAPP62952 87 aa8.92□□□□□ -0.98
VPS53-207ENST00000570510 ZNF92Q03936 586 aa8.92□□□□□ -0.98
VPS53-207ENST00000570510 SLC18B1Q6NT16 456 aa8.92□□□□□ -0.98
VPS53-207ENST00000570510 MKXQ8IYA7 352 aa8.92□□□□□ -0.98
VPS53-207ENST00000570510 LINC00482Q8N8I6 264 aa8.92□□□□□ -0.98
VPS53-207ENST00000570510 ZNF454Q8N9F8 522 aa8.92□□□□□ -0.98
VPS53-207ENST00000570510 SLC37A3Q8NCC5 494 aa8.92□□□□□ -0.98
VPS53-207ENST00000570510 PROKR2Q8NFJ6 384 aa8.92□□□□□ -0.98
VPS53-207ENST00000570510 OR8D4Q8NGM9 314 aa8.92□□□□□ -0.98
VPS53-207ENST00000570510 OR2AE1Q8NHA4 323 aa8.92□□□□□ -0.98
VPS53-207ENST00000570510 PIFOQ8TCI5 191 aa8.92□□□□□ -0.98
VPS53-207ENST00000570510 SEH1LQ96EE3 360 aa8.92□□□□□ -0.98
VPS53-207ENST00000570510 AJUBAQ96IF1 538 aa8.92□□□□□ -0.98
VPS53-207ENST00000570510 NIPSNAP1Q9BPW8 284 aa8.92□□□□□ -0.98
VPS53-207ENST00000570510 DNTTIP1Q9H147 329 aa8.92□□□□□ -0.98
VPS53-207ENST00000570510 SRA1Q9HD15 236 aaKnown RBP8.92□□□□□ -0.98
VPS53-207ENST00000570510 PAPOLBQ9NRJ5 636 aaKnown RBP8.92□□□□□ -0.98
VPS53-207ENST00000570510 NKX1-2Q9UD57 310 aaPredicted RBP8.92□□□□□ -0.98
VPS53-207ENST00000570510 LHFPL6Q9Y693 200 aa8.92□□□□□ -0.98
VPS53-207ENST00000570510 RYR2Q92736 4967 aa8.92□□□□□ -0.98
VPS53-207ENST00000570510 VGLL3A8MV65 326 aa8.91□□□□□ -0.98
VPS53-207ENST00000570510 G3V2T6 193 aa8.91□□□□□ -0.98
VPS53-207ENST00000570510 M0R135 149 aa8.91□□□□□ -0.98
VPS53-207ENST00000570510 CDIPTO14735 213 aa8.91□□□□□ -0.98
VPS53-207ENST00000570510 TIPRLO75663 272 aa8.91□□□□□ -0.98
VPS53-207ENST00000570510 HLA-DQA2P01906 255 aa8.91□□□□□ -0.98
VPS53-207ENST00000570510 ENTPD1P49961 510 aa8.91□□□□□ -0.98
VPS53-207ENST00000570510 CAV3P56539 151 aa8.91□□□□□ -0.98
VPS53-207ENST00000570510 IL5RAQ01344 420 aa8.91□□□□□ -0.98
VPS53-207ENST00000570510 SNCBQ16143 134 aa8.91□□□□□ -0.98
VPS53-207ENST00000570510 NKAPLQ5M9Q1 402 aa8.91□□□□□ -0.98
VPS53-207ENST00000570510 ATPAF1Q5TC12 328 aaPredicted RBP8.91□□□□□ -0.98
VPS53-207ENST00000570510 KDM4DQ6B0I6 523 aa8.91□□□□□ -0.98
VPS53-207ENST00000570510 ZFAND6Q6FIF0 208 aa8.91□□□□□ -0.98
VPS53-207ENST00000570510 HCP5Q6MZN7 132 aa8.91□□□□□ -0.98
VPS53-207ENST00000570510 DRAM2Q6UX65 266 aa8.91□□□□□ -0.98
VPS53-207ENST00000570510 LINC00346Q8IVM7 164 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms