RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 RFPL4AL1F8VTS6 287 aa9.75□□□□□ -0.85
CAPN3-220ENST00000569827 XPNPEP2O43895 674 aa9.75□□□□□ -0.85
CAPN3-220ENST00000569827 CCNB2O95067 398 aa9.75□□□□□ -0.85
CAPN3-220ENST00000569827 CST4P01036 141 aa9.75□□□□□ -0.85
CAPN3-220ENST00000569827 VSIG8P0DPA2 414 aa9.75□□□□□ -0.85
CAPN3-220ENST00000569827 HSD17B1P14061 328 aa9.75□□□□□ -0.85
CAPN3-220ENST00000569827 ZNF3P17036 446 aa9.75□□□□□ -0.85
CAPN3-220ENST00000569827 CFL1P23528 166 aaKnown RBP9.75□□□□□ -0.85
CAPN3-220ENST00000569827 TMEM200BQ69YZ2 307 aa9.75□□□□□ -0.85
CAPN3-220ENST00000569827 HAGHLQ6PII5 290 aaPredicted RBP9.75□□□□□ -0.85
CAPN3-220ENST00000569827 THAP5Q7Z6K1 395 aa9.75□□□□□ -0.85
CAPN3-220ENST00000569827 CPLX4Q7Z7G2 160 aa9.75□□□□□ -0.85
CAPN3-220ENST00000569827 C11orf42Q8N5U0 333 aa9.75□□□□□ -0.85
CAPN3-220ENST00000569827 OR2T33Q8NG76 320 aa9.75□□□□□ -0.85
CAPN3-220ENST00000569827 OR4S1Q8NGB4 309 aa9.75□□□□□ -0.85
CAPN3-220ENST00000569827 DMRTB1Q96MA1 342 aa9.75□□□□□ -0.85
CAPN3-220ENST00000569827 CDRT15Q96T59 188 aa9.75□□□□□ -0.85
CAPN3-220ENST00000569827 ELAC2Q9BQ52 826 aaKnown RBP9.75□□□□□ -0.85
CAPN3-220ENST00000569827 CDCA4Q9BXL8 241 aa9.75□□□□□ -0.85
CAPN3-220ENST00000569827 FAM107BQ9H098 131 aa9.75□□□□□ -0.85
CAPN3-220ENST00000569827 CCDC134Q9H6E4 229 aa9.75□□□□□ -0.85
CAPN3-220ENST00000569827 ARGLU1Q9NWB6 273 aaPredicted RBP9.75□□□□□ -0.85
CAPN3-220ENST00000569827 TENM3Q9P273 2699 aa9.75□□□□□ -0.85
CAPN3-220ENST00000569827 TRBV23-1A0A0A0MS06 115 aa9.74□□□□□ -0.85
CAPN3-220ENST00000569827 K7EIL1 84 aa9.74□□□□□ -0.85
CAPN3-220ENST00000569827 SYNGR1O43759 233 aa9.74□□□□□ -0.85
CAPN3-220ENST00000569827 GLCEO94923 617 aa9.74□□□□□ -0.85
CAPN3-220ENST00000569827 IFNGP01579 166 aa9.74□□□□□ -0.85
CAPN3-220ENST00000569827 LGALS4P56470 323 aa9.74□□□□□ -0.85
CAPN3-220ENST00000569827 PSMA6P60900 246 aaKnown RBP9.74□□□□□ -0.85
CAPN3-220ENST00000569827 RPL31P62899 125 aaKnown RBP9.74□□□□□ -0.85
CAPN3-220ENST00000569827 ARSJQ5FYB0 599 aaPredicted RBP9.74□□□□□ -0.85
CAPN3-220ENST00000569827 SAMD4BQ5PRF9 694 aaKnown RBP9.74□□□□□ -0.85
CAPN3-220ENST00000569827 C11orf88Q6PI97 169 aa9.74□□□□□ -0.85
CAPN3-220ENST00000569827 MOB3CQ70IA8 216 aa9.74□□□□□ -0.85
CAPN3-220ENST00000569827 COMMD2Q86X83 199 aa9.74□□□□□ -0.85
CAPN3-220ENST00000569827 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.74□□□□□ -0.85
CAPN3-220ENST00000569827 FTMTQ8N4E7 242 aa9.74□□□□□ -0.85
CAPN3-220ENST00000569827 FAM81AQ8TBF8 368 aa9.74□□□□□ -0.85
CAPN3-220ENST00000569827 AQP3Q92482 292 aa9.74□□□□□ -0.85
CAPN3-220ENST00000569827 CMTM5Q96DZ9 223 aa9.74□□□□□ -0.85
CAPN3-220ENST00000569827 NIPSNAP1Q9BPW8 284 aa9.74□□□□□ -0.85
CAPN3-220ENST00000569827 OR51I2Q9H344 312 aa9.74□□□□□ -0.85
CAPN3-220ENST00000569827 RAB18Q9NP72 206 aa9.74□□□□□ -0.85
CAPN3-220ENST00000569827 CMC2Q9NRP2 79 aa9.74□□□□□ -0.85
CAPN3-220ENST00000569827 ZNF446Q9NWS9 450 aa9.74□□□□□ -0.85
CAPN3-220ENST00000569827 OR14J1Q9UGF5 321 aa9.74□□□□□ -0.85
CAPN3-220ENST00000569827 TCF19Q9Y242 345 aa9.74□□□□□ -0.85
CAPN3-220ENST00000569827 LRP12Q9Y561 859 aa9.74□□□□□ -0.85
CAPN3-220ENST00000569827 ARG1P05089 322 aa9.73□□□□□ -0.85
CAPN3-220ENST00000569827 LYNP07948 512 aa9.73□□□□□ -0.85
CAPN3-220ENST00000569827 FAHP16930 419 aa9.73□□□□□ -0.85
CAPN3-220ENST00000569827 CD33P20138 364 aa9.73□□□□□ -0.85
CAPN3-220ENST00000569827 HMGA2P52926 109 aa9.73□□□□□ -0.85
CAPN3-220ENST00000569827 BLCAPP62952 87 aa9.73□□□□□ -0.85
CAPN3-220ENST00000569827 GNG3P63215 75 aa9.73□□□□□ -0.85
CAPN3-220ENST00000569827 SSX2Q16385 188 aa9.73□□□□□ -0.85
CAPN3-220ENST00000569827 FAM76BQ5HYJ3 339 aa9.73□□□□□ -0.85
CAPN3-220ENST00000569827 PLCXD3Q63HM9 321 aa9.73□□□□□ -0.85
CAPN3-220ENST00000569827 PLBD1Q6P4A8 553 aa9.73□□□□□ -0.85
CAPN3-220ENST00000569827 ACP7Q6ZNF0 438 aa9.73□□□□□ -0.85
CAPN3-220ENST00000569827 NDUFA11Q86Y39 141 aa9.73□□□□□ -0.85
CAPN3-220ENST00000569827 BBS1Q8NFJ9 593 aa9.73□□□□□ -0.85
CAPN3-220ENST00000569827 OR2T27Q8NH04 317 aa9.73□□□□□ -0.85
CAPN3-220ENST00000569827 OTOSQ8NHW6 89 aa9.73□□□□□ -0.85
CAPN3-220ENST00000569827 WIPF2Q8TF74 440 aaPredicted RBP9.73□□□□□ -0.85
CAPN3-220ENST00000569827 SDSLQ96GA7 329 aa9.73□□□□□ -0.85
CAPN3-220ENST00000569827 HIST1H2AAQ96QV6 131 aa9.73□□□□□ -0.85
CAPN3-220ENST00000569827 RGCCQ9H4X1 137 aa9.73□□□□□ -0.85
CAPN3-220ENST00000569827 ARL8BQ9NVJ2 186 aa9.73□□□□□ -0.85
CAPN3-220ENST00000569827 BAIAP2Q9UQB8 552 aa9.73□□□□□ -0.85
CAPN3-220ENST00000569827 SAMHD1Q9Y3Z3 626 aaKnown RBP9.73□□□□□ -0.85
CAPN3-220ENST00000569827 A6NDX4 124 aa9.72□□□□□ -0.85
CAPN3-220ENST00000569827 A6NIN4 97 aa9.72□□□□□ -0.85
CAPN3-220ENST00000569827 PRR32B1ATL7 298 aa9.72□□□□□ -0.85
CAPN3-220ENST00000569827 PEX14O75381 377 aa9.72□□□□□ -0.85
CAPN3-220ENST00000569827 KRT36O76013 467 aa9.72□□□□□ -0.85
CAPN3-220ENST00000569827 APOC1P02654 83 aa9.72□□□□□ -0.85
CAPN3-220ENST00000569827 PRDX6P30041 224 aa9.72□□□□□ -0.85
CAPN3-220ENST00000569827 CNN3Q15417 329 aaKnown RBP9.72□□□□□ -0.85
CAPN3-220ENST00000569827 VAX1Q5SQQ9 334 aa9.72□□□□□ -0.85
CAPN3-220ENST00000569827 SHFQ7M4L6 423 aa9.72□□□□□ -0.85
CAPN3-220ENST00000569827 DEFB107AQ8IZN7 70 aa9.72□□□□□ -0.85
CAPN3-220ENST00000569827 PGAM4Q8N0Y7 254 aa9.72□□□□□ -0.85
CAPN3-220ENST00000569827 OR4F17Q8NGA8 305 aa9.72□□□□□ -0.85
CAPN3-220ENST00000569827 OR5K1Q8NHB7 308 aa9.72□□□□□ -0.85
CAPN3-220ENST00000569827 TEX47Q8TBZ9 253 aa9.72□□□□□ -0.85
CAPN3-220ENST00000569827 OR4F4Q96R69 305 aa9.72□□□□□ -0.85
CAPN3-220ENST00000569827 NIPAL2Q9H841 368 aa9.72□□□□□ -0.85
CAPN3-220ENST00000569827 HEXA-AS1Q9H8Q6 139 aa9.72□□□□□ -0.85
CAPN3-220ENST00000569827 GPR173Q9NS66 373 aa9.72□□□□□ -0.85
CAPN3-220ENST00000569827 USE1Q9NZ43 259 aa9.72□□□□□ -0.85
CAPN3-220ENST00000569827 DYNC2H1Q8NCM8 4307 aaKnown RBP9.71□□□□□ -0.85
CAPN3-220ENST00000569827 WI2-2373I1.2A0A1W2PRP0 233 aa9.71□□□□□ -0.86
CAPN3-220ENST00000569827 TCRBV5S2A0A599 114 aa9.71□□□□□ -0.86
CAPN3-220ENST00000569827 H3BN98 237 aa9.71□□□□□ -0.86
CAPN3-220ENST00000569827 MTRF1O75570 445 aaKnown RBP9.71□□□□□ -0.86
CAPN3-220ENST00000569827 INMTO95050 263 aa9.71□□□□□ -0.86
CAPN3-220ENST00000569827 MRPL3P09001 348 aaKnown RBP9.71□□□□□ -0.86
CAPN3-220ENST00000569827 PRDX2P32119 198 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms