RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 GPR148Q8TDV2 347 aa21.91■■□□□ 1.1
NME3-209ENST00000566600 TSEN15Q8WW01 171 aaKnown RBP21.91■■□□□ 1.1
NME3-209ENST00000566600 MIOXQ9UGB7 285 aa21.91■■□□□ 1.1
NME3-209ENST00000566600 OOEPA6NGQ2 149 aa21.9■■□□□ 1.1
NME3-209ENST00000566600 LALBAP00709 142 aa21.9■■□□□ 1.1
NME3-209ENST00000566600 TGFAP01135 160 aa21.9■■□□□ 1.1
NME3-209ENST00000566600 DMKNQ6E0U4 476 aaPredicted RBP21.9■■□□□ 1.1
NME3-209ENST00000566600 FAM166AQ6J272 317 aa21.9■■□□□ 1.1
NME3-209ENST00000566600 DCDC5Q6ZRR9 648 aa21.9■■□□□ 1.1
NME3-209ENST00000566600 TMEM246Q9BRR3 403 aa21.9■■□□□ 1.1
NME3-209ENST00000566600 METTL17Q9H7H0 456 aaPredicted RBP21.9■■□□□ 1.1
NME3-209ENST00000566600 NEK6Q9HC98 313 aa21.9■■□□□ 1.1
NME3-209ENST00000566600 YAE1D1Q9NRH1 226 aa21.9■■□□□ 1.1
NME3-209ENST00000566600 ZNF281Q9Y2X9 895 aa21.9■■□□□ 1.1
NME3-209ENST00000566600 SIRT4Q9Y6E7 314 aaPredicted RBP21.9■■□□□ 1.1
NME3-209ENST00000566600 CEACAM18A8MTB9 384 aa21.89■■□□□ 1.09
NME3-209ENST00000566600 SRRM5B3KS81 715 aa21.89■■□□□ 1.09
NME3-209ENST00000566600 FAM157AC9JC47 383 aa21.89■■□□□ 1.09
NME3-209ENST00000566600 NDUFA2O43678 99 aa21.89■■□□□ 1.09
NME3-209ENST00000566600 MUC1P15941 1255 aaPredicted RBP21.89■■□□□ 1.09
NME3-209ENST00000566600 PRKACBP22694 351 aa21.89■■□□□ 1.09
NME3-209ENST00000566600 CD80P33681 288 aa21.89■■□□□ 1.09
NME3-209ENST00000566600 BDH1Q02338 343 aa21.89■■□□□ 1.09
NME3-209ENST00000566600 TEX36Q5VZQ5 186 aa21.89■■□□□ 1.09
NME3-209ENST00000566600 HAGHLQ6PII5 290 aaPredicted RBP21.89■■□□□ 1.09
NME3-209ENST00000566600 Q71RC1 249 aaPredicted RBP21.89■■□□□ 1.09
NME3-209ENST00000566600 PRSS48Q7RTY5 328 aa21.89■■□□□ 1.09
NME3-209ENST00000566600 SERPINA12Q8IW75 414 aa21.89■■□□□ 1.09
NME3-209ENST00000566600 DNAAF1Q8NEP3 725 aa21.89■■□□□ 1.09
NME3-209ENST00000566600 DEFB108BQ8NET1 73 aa21.89■■□□□ 1.09
NME3-209ENST00000566600 OR5D14Q8NGL3 314 aa21.89■■□□□ 1.09
NME3-209ENST00000566600 OR51F2Q8NH61 342 aa21.89■■□□□ 1.09
NME3-209ENST00000566600 AQP3Q92482 292 aa21.89■■□□□ 1.09
NME3-209ENST00000566600 HIVEP2P31629 2446 aa21.88■■□□□ 1.09
NME3-209ENST00000566600 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP21.88■■□□□ 1.099e-14■■■■□ 24.2
NME3-209ENST00000566600 FAM230AA0A1W2PPH8 454 aa21.88■■□□□ 1.09
NME3-209ENST00000566600 A8MV72 311 aaPredicted RBP21.88■■□□□ 1.09
NME3-209ENST00000566600 C3orf80F5H4A9 247 aa21.88■■□□□ 1.09
NME3-209ENST00000566600 J3QT63 122 aa21.88■■□□□ 1.09
NME3-209ENST00000566600 CD2P06729 351 aa21.88■■□□□ 1.09
NME3-209ENST00000566600 OCM2P0CE71 109 aa21.88■■□□□ 1.09
NME3-209ENST00000566600 OCMP0CE72 109 aaPredicted RBP21.88■■□□□ 1.09
NME3-209ENST00000566600 RPS2P15880 293 aaKnown RBP21.88■■□□□ 1.09
NME3-209ENST00000566600 ATF1P18846 271 aa21.88■■□□□ 1.09
NME3-209ENST00000566600 HAAOP46952 286 aa21.88■■□□□ 1.09
NME3-209ENST00000566600 ACSM1Q08AH1 577 aa21.88■■□□□ 1.09
NME3-209ENST00000566600 IRF3Q14653 427 aa21.88■■□□□ 1.09
NME3-209ENST00000566600 MICBQ29980 383 aa21.88■■□□□ 1.09
NME3-209ENST00000566600 SFRP4Q6FHJ7 346 aaPredicted RBP21.88■■□□□ 1.09
NME3-209ENST00000566600 NLRC3Q7RTR2 1065 aa21.88■■□□□ 1.09
NME3-209ENST00000566600 TRMT10AQ8TBZ6 339 aaKnown RBP21.88■■□□□ 1.09
NME3-209ENST00000566600 GHSRQ92847 366 aa21.88■■□□□ 1.09
NME3-209ENST00000566600 SPSB1Q96BD6 273 aa21.88■■□□□ 1.09
NME3-209ENST00000566600 BORCS8Q96FH0 119 aa21.88■■□□□ 1.09
NME3-209ENST00000566600 KCNS2Q9ULS6 477 aa21.88■■□□□ 1.09
NME3-209ENST00000566600 POLDIP2Q9Y2S7 368 aa21.88■■□□□ 1.09
NME3-209ENST00000566600 F5H0A9 414 aaPredicted RBP21.87■■□□□ 1.09
NME3-209ENST00000566600 CD1AP06126 327 aa21.87■■□□□ 1.09
NME3-209ENST00000566600 MSMBP08118 114 aa21.87■■□□□ 1.09
NME3-209ENST00000566600 EEF1B2P24534 225 aaKnown RBP21.87■■□□□ 1.09
NME3-209ENST00000566600 SPHARQ15513 63 aa21.87■■□□□ 1.09
NME3-209ENST00000566600 YIF1BQ5BJH7 314 aa21.87■■□□□ 1.09
NME3-209ENST00000566600 GLCCI1Q86VQ1 547 aa21.87■■□□□ 1.09
NME3-209ENST00000566600 PARP16Q8N5Y8 322 aa21.87■■□□□ 1.09
NME3-209ENST00000566600 NPRL2Q8WTW4 380 aa21.87■■□□□ 1.09
NME3-209ENST00000566600 SGCDQ92629 289 aa21.87■■□□□ 1.09
NME3-209ENST00000566600 C12orf43Q96C57 262 aaKnown RBP21.87■■□□□ 1.09
NME3-209ENST00000566600 PKIBQ9C010 78 aa21.87■■□□□ 1.09
NME3-209ENST00000566600 CCDC90BQ9GZT6 254 aa21.87■■□□□ 1.09
NME3-209ENST00000566600 ZCCHC4Q9H5U6 513 aa21.87■■□□□ 1.09
NME3-209ENST00000566600 NSD1Q96L73 2696 aaPredicted RBP21.86■■□□□ 1.09
NME3-209ENST00000566600 ABCA2Q9BZC7 2435 aa21.86■■□□□ 1.09
NME3-209ENST00000566600 PLPP2O43688 288 aa21.86■■□□□ 1.09
NME3-209ENST00000566600 ALX3O95076 343 aa21.86■■□□□ 1.09
NME3-209ENST00000566600 MT-ND2P03891 347 aa21.86■■□□□ 1.09
NME3-209ENST00000566600 WNT2P09544 360 aa21.86■■□□□ 1.09
NME3-209ENST00000566600 EGR1P18146 543 aa21.86■■□□□ 1.09
NME3-209ENST00000566600 PCMT1P22061 227 aa21.86■■□□□ 1.09
NME3-209ENST00000566600 RBP2P50120 134 aa21.86■■□□□ 1.09
NME3-209ENST00000566600 ATP1B3P54709 279 aa21.86■■□□□ 1.09
NME3-209ENST00000566600 DVL1P1P54792 670 aaPredicted RBP21.86■■□□□ 1.09
NME3-209ENST00000566600 ESCO2Q56NI9 601 aa21.86■■□□□ 1.09
NME3-209ENST00000566600 ZFP41Q8N8Y5 198 aa21.86■■□□□ 1.09
NME3-209ENST00000566600 C19orf18Q8NEA5 215 aa21.86■■□□□ 1.09
NME3-209ENST00000566600 RGP1Q92546 391 aaPredicted RBP21.86■■□□□ 1.09
NME3-209ENST00000566600 NEIL1Q96FI4 390 aaPredicted RBP21.86■■□□□ 1.09
NME3-209ENST00000566600 YTHDF1Q9BYJ9 559 aaKnown RBP21.86■■□□□ 1.09
NME3-209ENST00000566600 LRCH1Q9Y2L9 728 aa21.86■■□□□ 1.09
NME3-209ENST00000566600 TRAV20A0A0B4J274 112 aa21.85■■□□□ 1.09
NME3-209ENST00000566600 AKR7A2O43488 359 aa21.85■■□□□ 1.09
NME3-209ENST00000566600 FOXH1O75593 365 aa21.85■■□□□ 1.09
NME3-209ENST00000566600 RHBDL1O75783 438 aa21.85■■□□□ 1.09
NME3-209ENST00000566600 CELP19835 753 aa21.85■■□□□ 1.09
NME3-209ENST00000566600 MPZP25189 248 aa21.85■■□□□ 1.09
NME3-209ENST00000566600 AZGP1P25311 298 aaKnown RBP21.85■■□□□ 1.09
NME3-209ENST00000566600 GABARAPL2P60520 117 aa21.85■■□□□ 1.09
NME3-209ENST00000566600 MED22Q15528 200 aa21.85■■□□□ 1.09
NME3-209ENST00000566600 LHFPL2Q6ZUX7 228 aa21.85■■□□□ 1.09
NME3-209ENST00000566600 FAM90A1Q86YD7 464 aa21.85■■□□□ 1.09
NME3-209ENST00000566600 OR8B3Q8NGG8 313 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms