RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 COMTD1Q86VU5 262 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 RANBP3LQ86VV4 465 aaPredicted RBP0.89□□□□□ -2.27
SMG1-212ENST00000566328 TUSC5Q8IXB3 177 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 IFT20Q8IY31 132 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 ST13P4Q8IZP2 240 aaPredicted RBP0.89□□□□□ -2.27
SMG1-212ENST00000566328 CLECL1Q8IZS7 167 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 C10orf111Q8N326 155 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 MMGT1Q8N4V1 131 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 MREGQ8N565 214 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 TMEM252Q8N6L7 170 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 CNEP1R1Q8N9A8 125 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 BBOF1Q8ND07 529 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 MORN4Q8NDC4 146 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 OR5D16Q8NGK9 328 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 OR5L2Q8NGL0 311 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 OR1J4Q8NGS1 313 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 OR5AK3PQ8NH89 298 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 UBALD1Q8TB05 177 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 PNPT1Q8TCS8 783 aaKnown RBP0.89□□□□□ -2.27
SMG1-212ENST00000566328 MGARPQ8TDB4 240 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 TCP10LQ8TDR4 215 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 GPR151Q8TDV0 419 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 PAQR8Q8TEZ7 354 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 ANKRD7Q92527 254 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 FRZBQ92765 325 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 OSTF1Q92882 214 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 CDS1Q92903 461 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 PEX13Q92968 403 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 HGDQ93099 445 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 MAL2Q969L2 176 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 WDR34Q96EX3 536 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 PIK3IP1Q96FE7 263 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 CHMP6Q96FZ7 201 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 RMND5BQ96G75 393 aaPredicted RBP0.89□□□□□ -2.27
SMG1-212ENST00000566328 VMP1Q96GC9 406 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 C5orf30Q96GV9 206 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 NOL4LQ96MY1 436 aaPredicted RBP0.89□□□□□ -2.27
SMG1-212ENST00000566328 AMDHD1Q96NU7 426 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 COL21A1Q96P44 957 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 IP6K3Q96PC2 410 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 TSSK3Q96PN8 268 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 PPP1R2P1Q96PQ5 205 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 FAM111AQ96PZ2 611 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 FMO2Q99518 471 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 SERPINI1Q99574 410 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 ARHGDIGQ99819 225 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 PAIP2Q9BPZ3 127 aaKnown RBP0.89□□□□□ -2.27
SMG1-212ENST00000566328 MRPL57Q9BQC6 102 aaKnown RBP0.89□□□□□ -2.27
SMG1-212ENST00000566328 CCDC77Q9BR77 488 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 NAT9Q9BTE0 207 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 DOHHQ9BU89 302 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 C1orf50Q9BV19 199 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 THUMPD3Q9BV44 507 aaKnown RBP0.89□□□□□ -2.27
SMG1-212ENST00000566328 FUNDC2Q9BWH2 189 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 CACNG6Q9BXT2 260 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 ANGPTL4Q9BY76 406 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 PARD6BQ9BYG5 372 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 ELOVL6Q9H5J4 265 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 WDR55Q9H6Y2 383 aaPredicted RBP0.89□□□□□ -2.27
SMG1-212ENST00000566328 METTL7AQ9H8H3 244 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 PLEKHF2Q9H8W4 249 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 TRIM45Q9H8W5 580 aaPredicted RBP0.89□□□□□ -2.27
SMG1-212ENST00000566328 COPS7BQ9H9Q2 264 aaPredicted RBP0.89□□□□□ -2.27
SMG1-212ENST00000566328 CALHM2Q9HA72 323 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 LYRM4Q9HD34 91 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 DDX28Q9NUL7 540 aaKnown RBP0.89□□□□□ -2.27
SMG1-212ENST00000566328 AHSPQ9NZD4 102 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 MAT2BQ9NZL9 334 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 ERVK-18Q9QC07 812 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 VPS29Q9UBQ0 182 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 COPS7AQ9UBW8 275 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 ZNF639Q9UID6 485 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 NXT1Q9UKK6 140 aaKnown RBP0.89□□□□□ -2.27
SMG1-212ENST00000566328 PCTPQ9UKL6 214 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 ENTPD4Q9Y227 616 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 OR10H1Q9Y4A9 318 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 DNAJC15Q9Y5T4 150 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 SOX21Q9Y651 276 aaPredicted RBP0.89□□□□□ -2.27
SMG1-212ENST00000566328 IKBKGQ9Y6K9 419 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 PKD1L1Q8TDX9 2849 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 ANKRD17O75179 2603 aaKnown RBP0.89□□□□□ -2.27
SMG1-212ENST00000566328 HUWE1Q7Z6Z7 4374 aaKnown RBP0.89□□□□□ -2.27
SMG1-212ENST00000566328 C2CD3Q4AC94 2353 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 ARFGEF3Q5TH69 2177 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 FLNAP21333 2647 aaKnown RBP0.88□□□□□ -2.27
SMG1-212ENST00000566328 DNAH7Q8WXX0 4024 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 ANKHD1Q8IWZ3 2542 aaKnown RBP0.88□□□□□ -2.27
SMG1-212ENST00000566328 PLCE1Q9P212 2302 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 CR1P17927 2039 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 SACSQ9NZJ4 4579 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 IGHV1OR15-1A0A075B7D0 117 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 A0A1W2PNV4 684 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 SLC22A20A6NK97 555 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 SYCE1LA8MT33 242 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 DEFB108AA8MXU0 73 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 E7EQL1 145 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 LRRN3E7EW58 273 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 COPEO14579 308 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 TP53I11O14683 189 aa0.88□□□□□ -2.27
SMG1-212ENST00000566328 AZIN1O14977 448 aa0.88□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms