RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 ZNF573Q86YE8 665 aa17.64■□□□□ 0.41
SHCBP1-205ENST00000566016 NANOGP1Q8N7R0 232 aa17.64■□□□□ 0.41
SHCBP1-205ENST00000566016 OR13C3Q8NGS6 347 aa17.64■□□□□ 0.41
SHCBP1-205ENST00000566016 LRRC29Q8WV35 223 aa17.64■□□□□ 0.41
SHCBP1-205ENST00000566016 GATAD2BQ8WXI9 593 aa17.64■□□□□ 0.41
SHCBP1-205ENST00000566016 RPL3LQ92901 407 aaKnown RBP17.64■□□□□ 0.41
SHCBP1-205ENST00000566016 TMEM246Q9BRR3 403 aa17.64■□□□□ 0.41
SHCBP1-205ENST00000566016 TMEM160Q9NX00 188 aa17.64■□□□□ 0.41
SHCBP1-205ENST00000566016 TRAV38-1A0A0B4J264 116 aa17.63■□□□□ 0.41
SHCBP1-205ENST00000566016 OOEPA6NGQ2 149 aa17.63■□□□□ 0.41
SHCBP1-205ENST00000566016 ARHGAP32A7KAX9 2087 aa17.63■□□□□ 0.41
SHCBP1-205ENST00000566016 A8MV72 311 aaPredicted RBP17.63■□□□□ 0.41
SHCBP1-205ENST00000566016 DENRO43583 198 aaKnown RBP17.63■□□□□ 0.41
SHCBP1-205ENST00000566016 NDUFA2O43678 99 aa17.63■□□□□ 0.41
SHCBP1-205ENST00000566016 ZNF205O95201 554 aa17.63■□□□□ 0.41
SHCBP1-205ENST00000566016 ZNF20P17024 532 aa17.63■□□□□ 0.41
SHCBP1-205ENST00000566016 BDH1Q02338 343 aa17.63■□□□□ 0.41
SHCBP1-205ENST00000566016 CNN3Q15417 329 aaKnown RBP17.63■□□□□ 0.41
SHCBP1-205ENST00000566016 UBE2V2Q15819 145 aa17.63■□□□□ 0.41
SHCBP1-205ENST00000566016 RBM48Q5RL73 367 aaKnown RBP17.63■□□□□ 0.41
SHCBP1-205ENST00000566016 DMKNQ6E0U4 476 aaPredicted RBP17.63■□□□□ 0.41
SHCBP1-205ENST00000566016 Q71RC1 249 aaPredicted RBP17.63■□□□□ 0.41
SHCBP1-205ENST00000566016 DNAAF1Q8NEP3 725 aa17.63■□□□□ 0.41
SHCBP1-205ENST00000566016 OR51F2Q8NH61 342 aa17.63■□□□□ 0.41
SHCBP1-205ENST00000566016 MND1Q9BWT6 205 aa17.63■□□□□ 0.41
SHCBP1-205ENST00000566016 ERVK-18Q9QC07 812 aa17.63■□□□□ 0.41
SHCBP1-205ENST00000566016 MIOXQ9UGB7 285 aa17.63■□□□□ 0.41
SHCBP1-205ENST00000566016 BLOC1S6Q9UL45 172 aa17.63■□□□□ 0.41
SHCBP1-205ENST00000566016 SLC7A11Q9UPY5 501 aa17.63■□□□□ 0.41
SHCBP1-205ENST00000566016 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.63■□□□□ 0.41
SHCBP1-205ENST00000566016 TGFAP01135 160 aa17.63■□□□□ 0.41
SHCBP1-205ENST00000566016 MUC1P15941 1255 aaPredicted RBP17.63■□□□□ 0.41
SHCBP1-205ENST00000566016 MPZP25189 248 aa17.63■□□□□ 0.41
SHCBP1-205ENST00000566016 DVL1P1P54792 670 aaPredicted RBP17.63■□□□□ 0.41
SHCBP1-205ENST00000566016 PARP16Q8N5Y8 322 aa17.63■□□□□ 0.41
SHCBP1-205ENST00000566016 GPR148Q8TDV2 347 aa17.63■□□□□ 0.41
SHCBP1-205ENST00000566016 AQP3Q92482 292 aa17.63■□□□□ 0.41
SHCBP1-205ENST00000566016 FGGYQ96C11 551 aa17.63■□□□□ 0.41
SHCBP1-205ENST00000566016 C12orf43Q96C57 262 aaKnown RBP17.63■□□□□ 0.41
SHCBP1-205ENST00000566016 METTL17Q9H7H0 456 aaPredicted RBP17.63■□□□□ 0.41
SHCBP1-205ENST00000566016 LRCH1Q9Y2L9 728 aa17.63■□□□□ 0.41
SHCBP1-205ENST00000566016 A8MXK9 166 aa17.62■□□□□ 0.41
SHCBP1-205ENST00000566016 J3QT63 122 aa17.62■□□□□ 0.41
SHCBP1-205ENST00000566016 EGR1P18146 543 aa17.62■□□□□ 0.41
SHCBP1-205ENST00000566016 FUT6P51993 359 aa17.62■□□□□ 0.41
SHCBP1-205ENST00000566016 ACSM1Q08AH1 577 aa17.62■□□□□ 0.41
SHCBP1-205ENST00000566016 IRF3Q14653 427 aa17.62■□□□□ 0.41
SHCBP1-205ENST00000566016 DMRTC1Q5HYR2 192 aa17.62■□□□□ 0.41
SHCBP1-205ENST00000566016 HAGHLQ6PII5 290 aaPredicted RBP17.62■□□□□ 0.41
SHCBP1-205ENST00000566016 NLRC3Q7RTR2 1065 aa17.62■□□□□ 0.41
SHCBP1-205ENST00000566016 RGP1Q92546 391 aaPredicted RBP17.62■□□□□ 0.41
SHCBP1-205ENST00000566016 SPSB1Q96BD6 273 aa17.62■□□□□ 0.41
SHCBP1-205ENST00000566016 YAE1D1Q9NRH1 226 aa17.62■□□□□ 0.41
SHCBP1-205ENST00000566016 KCNS2Q9ULS6 477 aa17.62■□□□□ 0.41
SHCBP1-205ENST00000566016 POLDIP2Q9Y2S7 368 aa17.62■□□□□ 0.41
SHCBP1-205ENST00000566016 POLR3KQ9Y2Y1 108 aaPredicted RBP17.62■□□□□ 0.41
SHCBP1-205ENST00000566016 SIRT4Q9Y6E7 314 aaPredicted RBP17.62■□□□□ 0.41
SHCBP1-205ENST00000566016 TRAV20A0A0B4J274 112 aa17.61■□□□□ 0.41
SHCBP1-205ENST00000566016 C3orf80F5H4A9 247 aa17.61■□□□□ 0.41
SHCBP1-205ENST00000566016 ALX3O95076 343 aa17.61■□□□□ 0.41
SHCBP1-205ENST00000566016 MT-ND2P03891 347 aa17.61■□□□□ 0.41
SHCBP1-205ENST00000566016 CD1AP06126 327 aa17.61■□□□□ 0.41
SHCBP1-205ENST00000566016 WNT2P09544 360 aa17.61■□□□□ 0.41
SHCBP1-205ENST00000566016 RPS2P15880 293 aaKnown RBP17.61■□□□□ 0.41
SHCBP1-205ENST00000566016 CD80P33681 288 aa17.61■□□□□ 0.41
SHCBP1-205ENST00000566016 HAAOP46952 286 aa17.61■□□□□ 0.41
SHCBP1-205ENST00000566016 MICBQ29980 383 aa17.61■□□□□ 0.41
SHCBP1-205ENST00000566016 GLCCI1Q86VQ1 547 aa17.61■□□□□ 0.41
SHCBP1-205ENST00000566016 FAM90A1Q86YD7 464 aa17.61■□□□□ 0.41
SHCBP1-205ENST00000566016 ZNF671Q8TAW3 534 aa17.61■□□□□ 0.41
SHCBP1-205ENST00000566016 NEIL1Q96FI4 390 aaPredicted RBP17.61■□□□□ 0.41
SHCBP1-205ENST00000566016 PGLYRP3Q96LB9 341 aa17.61■□□□□ 0.41
SHCBP1-205ENST00000566016 PKIBQ9C010 78 aa17.61■□□□□ 0.41
SHCBP1-205ENST00000566016 DHDHQ9UQ10 334 aa17.61■□□□□ 0.41
SHCBP1-205ENST00000566016 ZNF281Q9Y2X9 895 aa17.61■□□□□ 0.41
SHCBP1-205ENST00000566016 LSM2Q9Y333 95 aaKnown RBP17.61■□□□□ 0.41
SHCBP1-205ENST00000566016 SVEP1Q4LDE5 3571 aa17.61■□□□□ 0.41
SHCBP1-205ENST00000566016 PPIAL4CA0A0B4J2A2 164 aa17.6■□□□□ 0.41
SHCBP1-205ENST00000566016 IGKV1-9A0A0C4DH69 117 aa17.6■□□□□ 0.41
SHCBP1-205ENST00000566016 TNFRSF13BO14836 293 aaPredicted RBP17.6■□□□□ 0.41
SHCBP1-205ENST00000566016 RGS10O43665 173 aa17.6■□□□□ 0.41
SHCBP1-205ENST00000566016 PLPP2O43688 288 aa17.6■□□□□ 0.41
SHCBP1-205ENST00000566016 FOXH1O75593 365 aa17.6■□□□□ 0.41
SHCBP1-205ENST00000566016 RHBDL1O75783 438 aa17.6■□□□□ 0.41
SHCBP1-205ENST00000566016 ACAA1P09110 424 aaPredicted RBP17.6■□□□□ 0.41
SHCBP1-205ENST00000566016 PCMT1P22061 227 aa17.6■□□□□ 0.41
SHCBP1-205ENST00000566016 PRKACBP22694 351 aa17.6■□□□□ 0.41
SHCBP1-205ENST00000566016 HOXA4Q00056 320 aaPredicted RBP17.6■□□□□ 0.41
SHCBP1-205ENST00000566016 SFRP4Q6FHJ7 346 aaPredicted RBP17.6■□□□□ 0.41
SHCBP1-205ENST00000566016 PRSS48Q7RTY5 328 aa17.6■□□□□ 0.41
SHCBP1-205ENST00000566016 SERPINA12Q8IW75 414 aa17.6■□□□□ 0.41
SHCBP1-205ENST00000566016 BOLLQ8N9W6 283 aaKnown RBP17.6■□□□□ 0.41
SHCBP1-205ENST00000566016 TSEN15Q8WW01 171 aaKnown RBP17.6■□□□□ 0.41
SHCBP1-205ENST00000566016 SGCDQ92629 289 aa17.6■□□□□ 0.41
SHCBP1-205ENST00000566016 TMEM186Q96B77 213 aa17.6■□□□□ 0.41
SHCBP1-205ENST00000566016 MXRA5Q9NR99 2828 aa17.6■□□□□ 0.41
SHCBP1-205ENST00000566016 JMJD1CQ15652 2540 aa17.59■□□□□ 0.41
SHCBP1-205ENST00000566016 NOS1APO75052 506 aaPredicted RBP17.59■□□□□ 0.41
SHCBP1-205ENST00000566016 CD2P06729 351 aa17.59■□□□□ 0.41
SHCBP1-205ENST00000566016 ATF1P18846 271 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms