RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 RAB20Q9NX57 234 aa1.74□□□□□ -2.13
PALB2-203ENST00000565038 IL37Q9NZH6 218 aa1.74□□□□□ -2.13
PALB2-203ENST00000565038 RABL2AQ9UBK7 228 aaPredicted RBP1.74□□□□□ -2.13
PALB2-203ENST00000565038 PHRF1Q9P1Y6 1649 aaKnown RBP1.73□□□□□ -2.13
PALB2-203ENST00000565038 ADGRA3Q8IWK6 1321 aa1.73□□□□□ -2.13
PALB2-203ENST00000565038 TULP4Q9NRJ4 1543 aa1.73□□□□□ -2.13
PALB2-203ENST00000565038 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.73□□□□□ -2.13
PALB2-203ENST00000565038 TEX46H3BTG2 121 aa1.73□□□□□ -2.13
PALB2-203ENST00000565038 CLDN34H7C241 214 aa1.73□□□□□ -2.13
PALB2-203ENST00000565038 SCO1O75880 301 aa1.73□□□□□ -2.13
PALB2-203ENST00000565038 OR2F2O95006 317 aa1.73□□□□□ -2.13
PALB2-203ENST00000565038 AGTP01019 485 aa1.73□□□□□ -2.13
PALB2-203ENST00000565038 CTRB1P17538 263 aa1.73□□□□□ -2.13
PALB2-203ENST00000565038 MYL9P24844 172 aa1.73□□□□□ -2.13
PALB2-203ENST00000565038 MYCNOSP40205 109 aa1.73□□□□□ -2.13
PALB2-203ENST00000565038 UQCRFS1P47985 274 aa1.73□□□□□ -2.13
PALB2-203ENST00000565038 SERPINB8P50452 374 aa1.73□□□□□ -2.13
PALB2-203ENST00000565038 FABP6P51161 128 aa1.73□□□□□ -2.13
PALB2-203ENST00000565038 C21orf59P57076 290 aa1.73□□□□□ -2.13
PALB2-203ENST00000565038 RGS8P57771 180 aaPredicted RBP1.73□□□□□ -2.13
PALB2-203ENST00000565038 BTN1A1Q13410 526 aa1.73□□□□□ -2.13
PALB2-203ENST00000565038 NAB1Q13506 487 aa1.73□□□□□ -2.13
PALB2-203ENST00000565038 HSDL1Q3SXM5 330 aa1.73□□□□□ -2.13
PALB2-203ENST00000565038 TMEM69Q5SWH9 247 aa1.73□□□□□ -2.13
PALB2-203ENST00000565038 Q6ZSR6 202 aa1.73□□□□□ -2.13
PALB2-203ENST00000565038 EIF3MQ7L2H7 374 aaKnown RBP1.73□□□□□ -2.13
PALB2-203ENST00000565038 LUZP2Q86TE4 346 aa1.73□□□□□ -2.13
PALB2-203ENST00000565038 LINC00469Q8N7U9 141 aa1.73□□□□□ -2.13
PALB2-203ENST00000565038 OR10W1Q8NGF6 305 aa1.73□□□□□ -2.13
PALB2-203ENST00000565038 DCAKDQ8WVC6 231 aa1.73□□□□□ -2.13
PALB2-203ENST00000565038 RBFOX1Q9NWB1 397 aaKnown RBP1.73□□□□□ -2.13
PALB2-203ENST00000565038 RWDD2AQ9UIY3 292 aa1.73□□□□□ -2.13
PALB2-203ENST00000565038 SPHKAPQ2M3C7 1700 aa1.73□□□□□ -2.13
PALB2-203ENST00000565038 PCNTO95613 3336 aa1.73□□□□□ -2.13
PALB2-203ENST00000565038 TICRRQ7Z2Z1 1910 aa1.73□□□□□ -2.13
PALB2-203ENST00000565038 PPLO60437 1756 aa1.72□□□□□ -2.13
PALB2-203ENST00000565038 FMN2Q9NZ56 1722 aa1.72□□□□□ -2.13
PALB2-203ENST00000565038 C4orf51C9J302 202 aa1.72□□□□□ -2.13
PALB2-203ENST00000565038 J3QRE1 110 aa1.72□□□□□ -2.13
PALB2-203ENST00000565038 SLC19A2O60779 497 aa1.72□□□□□ -2.13
PALB2-203ENST00000565038 CDH16O75309 829 aa1.72□□□□□ -2.13
PALB2-203ENST00000565038 INAFM2P0DMQ5 153 aa1.72□□□□□ -2.13
PALB2-203ENST00000565038 GABRG2P18507 467 aa1.72□□□□□ -2.13
PALB2-203ENST00000565038 NELFEP18615 380 aaKnown RBP1.72□□□□□ -2.13
PALB2-203ENST00000565038 RFC3P40938 356 aa1.72□□□□□ -2.13
PALB2-203ENST00000565038 PPICP45877 212 aa1.72□□□□□ -2.13
PALB2-203ENST00000565038 UBE2MP61081 183 aaKnown RBP1.72□□□□□ -2.13
PALB2-203ENST00000565038 SP6Q3SY56 376 aa1.72□□□□□ -2.13
PALB2-203ENST00000565038 TMPRSS11AQ6ZMR5 421 aa1.72□□□□□ -2.13
PALB2-203ENST00000565038 BBOF1Q8ND07 529 aa1.72□□□□□ -2.13
PALB2-203ENST00000565038 OR5AR1Q8NGP9 310 aa1.72□□□□□ -2.13
PALB2-203ENST00000565038 ENKURQ8TC29 256 aa1.72□□□□□ -2.13
PALB2-203ENST00000565038 NRGNQ92686 78 aa1.72□□□□□ -2.13
PALB2-203ENST00000565038 C8orf44Q96CB5 159 aa1.72□□□□□ -2.13
PALB2-203ENST00000565038 TGS1Q96RS0 853 aaKnown RBP1.72□□□□□ -2.13
PALB2-203ENST00000565038 BPIFA3Q9BQP9 254 aa1.72□□□□□ -2.13
PALB2-203ENST00000565038 PIGUQ9H490 435 aa1.72□□□□□ -2.13
PALB2-203ENST00000565038 TMEM185BQ9H7F4 350 aa1.72□□□□□ -2.13
PALB2-203ENST00000565038 LYARQ9NX58 379 aaKnown RBP1.72□□□□□ -2.13
PALB2-203ENST00000565038 GCNT4Q9P109 453 aa1.72□□□□□ -2.13
PALB2-203ENST00000565038 ZNF492Q9P255 531 aa1.72□□□□□ -2.13
PALB2-203ENST00000565038 RCL1Q9Y2P8 373 aaKnown RBP1.72□□□□□ -2.13
PALB2-203ENST00000565038 R4GN34 69 aa1.72□□□□□ -2.13
PALB2-203ENST00000565038 LAMC1P11047 1609 aa1.72□□□□□ -2.13
PALB2-203ENST00000565038 OVOS2A0A0G2JMS6 1433 aa1.72□□□□□ -2.13
PALB2-203ENST00000565038 OVOS2A0A0J9YW53 1432 aa1.72□□□□□ -2.13
PALB2-203ENST00000565038 OVOS2Q6IE36 1432 aa1.72□□□□□ -2.13
PALB2-203ENST00000565038 BRD4O60885 1362 aaPredicted RBP1.72□□□□□ -2.13
PALB2-203ENST00000565038 INSRP06213 1382 aa1.72□□□□□ -2.13
PALB2-203ENST00000565038 EIF3AQ14152 1382 aaKnown RBP1.72□□□□□ -2.13
PALB2-203ENST00000565038 ANKRD36BQ8N2N9 1353 aa1.72□□□□□ -2.13
PALB2-203ENST00000565038 TONSLQ96HA7 1378 aa1.72□□□□□ -2.13
PALB2-203ENST00000565038 KIF1BO60333 1816 aa1.71□□□□□ -2.14
PALB2-203ENST00000565038 TSPAN11A1L157 253 aa1.71□□□□□ -2.14
PALB2-203ENST00000565038 C17orf51A8MQB3 221 aa1.71□□□□□ -2.14
PALB2-203ENST00000565038 ANKRD65E5RJM6 399 aa1.71□□□□□ -2.14
PALB2-203ENST00000565038 WRBO00258 174 aa1.71□□□□□ -2.14
PALB2-203ENST00000565038 DNALI1O14645 258 aaPredicted RBP1.71□□□□□ -2.14
PALB2-203ENST00000565038 OXTP01178 125 aa1.71□□□□□ -2.14
PALB2-203ENST00000565038 APLNRP35414 380 aa1.71□□□□□ -2.14
PALB2-203ENST00000565038 PCK1P35558 622 aa1.71□□□□□ -2.14
PALB2-203ENST00000565038 RPS15P62841 145 aaKnown RBP1.71□□□□□ -2.14
PALB2-203ENST00000565038 GBE1Q04446 702 aa1.71□□□□□ -2.14
PALB2-203ENST00000565038 MERTKQ12866 999 aa1.71□□□□□ -2.14
PALB2-203ENST00000565038 TRMT5Q32P41 509 aaKnown RBP1.71□□□□□ -2.14
PALB2-203ENST00000565038 SPANXN2Q5MJ10 180 aa1.71□□□□□ -2.14
PALB2-203ENST00000565038 SMARCD3Q6STE5 483 aa1.71□□□□□ -2.14
PALB2-203ENST00000565038 FAM131AQ6UXB0 335 aa1.71□□□□□ -2.14
PALB2-203ENST00000565038 OR4C5Q8NGB2 326 aa1.71□□□□□ -2.14
PALB2-203ENST00000565038 MCUR1Q96AQ8 359 aa1.71□□□□□ -2.14
PALB2-203ENST00000565038 ZBED3Q96IU2 234 aaPredicted RBP1.71□□□□□ -2.14
PALB2-203ENST00000565038 CHP1Q99653 195 aa1.71□□□□□ -2.14
PALB2-203ENST00000565038 C11orf70Q9BRQ4 267 aa1.71□□□□□ -2.14
PALB2-203ENST00000565038 PLEKHF2Q9H8W4 249 aa1.71□□□□□ -2.14
PALB2-203ENST00000565038 CCNB1IP1Q9NPC3 277 aa1.71□□□□□ -2.14
PALB2-203ENST00000565038 YARS2Q9Y2Z4 477 aaKnown RBP1.71□□□□□ -2.14
PALB2-203ENST00000565038 COL18A1P39060 1754 aa1.71□□□□□ -2.14
PALB2-203ENST00000565038 BCL9O00512 1426 aa1.71□□□□□ -2.14
PALB2-203ENST00000565038 TRPM3Q9HCF6 1732 aaPredicted RBP1.71□□□□□ -2.14
PALB2-203ENST00000565038 NLRC5Q86WI3 1866 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms