RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 TLNRD1Q9H1K6 362 aa13.42□□□□□ -0.26
RAB40C-208ENST00000564703 METTL17Q9H7H0 456 aaPredicted RBP13.42□□□□□ -0.26
RAB40C-208ENST00000564703 PATZ1Q9HBE1 687 aaKnown RBP13.42□□□□□ -0.26
RAB40C-208ENST00000564703 MIOXQ9UGB7 285 aa13.42□□□□□ -0.26
RAB40C-208ENST00000564703 CSPG4Q6UVK1 2322 aa13.42□□□□□ -0.26
RAB40C-208ENST00000564703 C3orf80F5H4A9 247 aa13.41□□□□□ -0.26
RAB40C-208ENST00000564703 LHBP01229 141 aa13.41□□□□□ -0.26
RAB40C-208ENST00000564703 ATF1P18846 271 aa13.41□□□□□ -0.26
RAB40C-208ENST00000564703 CELP19835 753 aa13.41□□□□□ -0.26
RAB40C-208ENST00000564703 IL2RGP31785 369 aa13.41□□□□□ -0.26
RAB40C-208ENST00000564703 MED22Q15528 200 aa13.41□□□□□ -0.26
RAB40C-208ENST00000564703 UBE2V2Q15819 145 aa13.41□□□□□ -0.26
RAB40C-208ENST00000564703 FAM166AQ6J272 317 aa13.41□□□□□ -0.26
RAB40C-208ENST00000564703 UTS2BQ765I0 119 aa13.41□□□□□ -0.26
RAB40C-208ENST00000564703 NLRC3Q7RTR2 1065 aa13.41□□□□□ -0.26
RAB40C-208ENST00000564703 GCSAMQ8N6F7 178 aa13.41□□□□□ -0.26
RAB40C-208ENST00000564703 ZFP41Q8N8Y5 198 aa13.41□□□□□ -0.26
RAB40C-208ENST00000564703 ZNF485Q8NCK3 441 aa13.41□□□□□ -0.26
RAB40C-208ENST00000564703 OR51A4Q8NGJ6 313 aa13.41□□□□□ -0.26
RAB40C-208ENST00000564703 NPRL2Q8WTW4 380 aa13.41□□□□□ -0.26
RAB40C-208ENST00000564703 MSI2Q96DH6 328 aaKnown RBP13.41□□□□□ -0.26
RAB40C-208ENST00000564703 TMEM246Q9BRR3 403 aa13.41□□□□□ -0.26
RAB40C-208ENST00000564703 ZCCHC4Q9H5U6 513 aa13.41□□□□□ -0.26
RAB40C-208ENST00000564703 PAK1IP1Q9NWT1 392 aaPredicted RBP13.41□□□□□ -0.26
RAB40C-208ENST00000564703 DNAJB11Q9UBS4 358 aa13.41□□□□□ -0.26
RAB40C-208ENST00000564703 POLDIP2Q9Y2S7 368 aa13.41□□□□□ -0.26
RAB40C-208ENST00000564703 SIRT4Q9Y6E7 314 aaPredicted RBP13.41□□□□□ -0.26
RAB40C-208ENST00000564703 PNMA8CA0A1B0GUJ8 204 aa13.4□□□□□ -0.26
RAB40C-208ENST00000564703 PQLC2LA1A4F0 135 aa13.4□□□□□ -0.26
RAB40C-208ENST00000564703 OOEPA6NGQ2 149 aa13.4□□□□□ -0.26
RAB40C-208ENST00000564703 A8MV72 311 aaPredicted RBP13.4□□□□□ -0.26
RAB40C-208ENST00000564703 MAGEB3O15480 346 aa13.4□□□□□ -0.26
RAB40C-208ENST00000564703 LALBAP00709 142 aa13.4□□□□□ -0.26
RAB40C-208ENST00000564703 IGHV2-5P01817 119 aa13.4□□□□□ -0.26
RAB40C-208ENST00000564703 MUC1P15941 1255 aaPredicted RBP13.4□□□□□ -0.26
RAB40C-208ENST00000564703 SOX2P48431 317 aa13.4□□□□□ -0.26
RAB40C-208ENST00000564703 RBP2P50120 134 aa13.4□□□□□ -0.26
RAB40C-208ENST00000564703 BDH1Q02338 343 aa13.4□□□□□ -0.26
RAB40C-208ENST00000564703 ZNF404Q494X3 552 aa13.4□□□□□ -0.26
RAB40C-208ENST00000564703 YIF1BQ5BJH7 314 aa13.4□□□□□ -0.26
RAB40C-208ENST00000564703 DMKNQ6E0U4 476 aaPredicted RBP13.4□□□□□ -0.26
RAB40C-208ENST00000564703 PRSS48Q7RTY5 328 aa13.4□□□□□ -0.26
RAB40C-208ENST00000564703 C19orf18Q8NEA5 215 aa13.4□□□□□ -0.26
RAB40C-208ENST00000564703 DNAAF1Q8NEP3 725 aa13.4□□□□□ -0.26
RAB40C-208ENST00000564703 AQP3Q92482 292 aa13.4□□□□□ -0.26
RAB40C-208ENST00000564703 KCNS2Q9ULS6 477 aa13.4□□□□□ -0.26
RAB40C-208ENST00000564703 CELSR1Q9NYQ6 3014 aa13.39□□□□□ -0.27
RAB40C-208ENST00000564703 J3QT63 122 aa13.39□□□□□ -0.27
RAB40C-208ENST00000564703 AKR7A2O43488 359 aa13.39□□□□□ -0.27
RAB40C-208ENST00000564703 PLPP2O43688 288 aa13.39□□□□□ -0.27
RAB40C-208ENST00000564703 FOXH1O75593 365 aa13.39□□□□□ -0.27
RAB40C-208ENST00000564703 CYB5AP00167 134 aa13.39□□□□□ -0.27
RAB40C-208ENST00000564703 MT-ND2P03891 347 aa13.39□□□□□ -0.27
RAB40C-208ENST00000564703 WNT2P09544 360 aa13.39□□□□□ -0.27
RAB40C-208ENST00000564703 RPS2P15880 293 aaKnown RBP13.39□□□□□ -0.27
RAB40C-208ENST00000564703 PCMT1P22061 227 aa13.39□□□□□ -0.27
RAB40C-208ENST00000564703 GLRA1P23415 457 aa13.39□□□□□ -0.27
RAB40C-208ENST00000564703 CD80P33681 288 aa13.39□□□□□ -0.27
RAB40C-208ENST00000564703 MTCP1P56278 107 aa13.39□□□□□ -0.27
RAB40C-208ENST00000564703 GMFBP60983 142 aa13.39□□□□□ -0.27
RAB40C-208ENST00000564703 ACSM1Q08AH1 577 aa13.39□□□□□ -0.27
RAB40C-208ENST00000564703 ESCO2Q56NI9 601 aa13.39□□□□□ -0.27
RAB40C-208ENST00000564703 DCDC5Q6ZRR9 648 aa13.39□□□□□ -0.27
RAB40C-208ENST00000564703 GLCCI1Q86VQ1 547 aa13.39□□□□□ -0.27
RAB40C-208ENST00000564703 ANGPTL5Q86XS5 388 aa13.39□□□□□ -0.27
RAB40C-208ENST00000564703 PARP16Q8N5Y8 322 aa13.39□□□□□ -0.27
RAB40C-208ENST00000564703 OR8B3Q8NGG8 313 aa13.39□□□□□ -0.27
RAB40C-208ENST00000564703 OR51F2Q8NH61 342 aa13.39□□□□□ -0.27
RAB40C-208ENST00000564703 SGCDQ92629 289 aa13.39□□□□□ -0.27
RAB40C-208ENST00000564703 SPSB1Q96BD6 273 aa13.39□□□□□ -0.27
RAB40C-208ENST00000564703 TMIGD2Q96BF3 282 aa13.39□□□□□ -0.27
RAB40C-208ENST00000564703 NEIL1Q96FI4 390 aaPredicted RBP13.39□□□□□ -0.27
RAB40C-208ENST00000564703 C1orf159Q96HA4 380 aa13.39□□□□□ -0.27
RAB40C-208ENST00000564703 OR8B2Q96RD0 313 aa13.39□□□□□ -0.27
RAB40C-208ENST00000564703 FGF23Q9GZV9 251 aaPredicted RBP13.39□□□□□ -0.27
RAB40C-208ENST00000564703 LPAR2Q9HBW0 351 aa13.39□□□□□ -0.27
RAB40C-208ENST00000564703 RASL12Q9NYN1 266 aa13.39□□□□□ -0.27
RAB40C-208ENST00000564703 CEACAM18A8MTB9 384 aa13.38□□□□□ -0.27
RAB40C-208ENST00000564703 SRRM5B3KS81 715 aa13.38□□□□□ -0.27
RAB40C-208ENST00000564703 FAM157AC9JC47 383 aa13.38□□□□□ -0.27
RAB40C-208ENST00000564703 MRPS14O60783 128 aaKnown RBP13.38□□□□□ -0.27
RAB40C-208ENST00000564703 RHBDL1O75783 438 aa13.38□□□□□ -0.27
RAB40C-208ENST00000564703 CD1AP06126 327 aa13.38□□□□□ -0.27
RAB40C-208ENST00000564703 MSMBP08118 114 aa13.38□□□□□ -0.27
RAB40C-208ENST00000564703 HCKP08631 526 aa13.38□□□□□ -0.27
RAB40C-208ENST00000564703 HSMCR30P0CW71 290 aa13.38□□□□□ -0.27
RAB40C-208ENST00000564703 ZNF16P17020 682 aaPredicted RBP13.38□□□□□ -0.27
RAB40C-208ENST00000564703 RAB3AP20336 220 aa13.38□□□□□ -0.27
RAB40C-208ENST00000564703 AZGP1P25311 298 aaKnown RBP13.38□□□□□ -0.27
RAB40C-208ENST00000564703 IRF3Q14653 427 aa13.38□□□□□ -0.27
RAB40C-208ENST00000564703 LHFPL2Q6ZUX7 228 aa13.38□□□□□ -0.27
RAB40C-208ENST00000564703 MKXQ8IYA7 352 aa13.38□□□□□ -0.27
RAB40C-208ENST00000564703 MS4A15Q8N5U1 240 aa13.38□□□□□ -0.27
RAB40C-208ENST00000564703 OR13C9Q8NGT0 318 aa13.38□□□□□ -0.27
RAB40C-208ENST00000564703 RPS4Y2Q8TD47 263 aa13.38□□□□□ -0.27
RAB40C-208ENST00000564703 THRSPQ92748 146 aa13.38□□□□□ -0.27
RAB40C-208ENST00000564703 TMEM106AQ96A25 262 aa13.38□□□□□ -0.27
RAB40C-208ENST00000564703 OPALINQ96PE5 141 aa13.38□□□□□ -0.27
RAB40C-208ENST00000564703 OR5M11Q96RB7 305 aa13.38□□□□□ -0.27
RAB40C-208ENST00000564703 PKIBQ9C010 78 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms